RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 KIAA1841Q6NSI8 718 aa14.41□□□□□ -0.1
PTPN7-218ENST00000496197 SHC3Q92529 594 aa14.41□□□□□ -0.1
PTPN7-218ENST00000496197 BAP1Q92560 729 aa14.41□□□□□ -0.1
PTPN7-218ENST00000496197 FAXDC2Q96IV6 333 aa14.41□□□□□ -0.1
PTPN7-218ENST00000496197 CRTAC1Q9NQ79 661 aa14.41□□□□□ -0.1
PTPN7-218ENST00000496197 PUF60Q9UHX1 559 aaKnown RBP14.41□□□□□ -0.1
PTPN7-218ENST00000496197 DSEQ9UL01 958 aa14.41□□□□□ -0.1
PTPN7-218ENST00000496197 BARX2Q9UMQ3 279 aaPredicted RBP14.41□□□□□ -0.1
PTPN7-218ENST00000496197 CDY1Q9Y6F8 540 aa14.41□□□□□ -0.1
PTPN7-218ENST00000496197 MYH10P35580 1976 aa14.41□□□□□ -0.1
PTPN7-218ENST00000496197 ITIH6Q6UXX5 1313 aa14.41□□□□□ -0.1
PTPN7-218ENST00000496197 A8MXQ7 604 aa14.4□□□□□ -0.1
PTPN7-218ENST00000496197 F8VZ95 297 aa14.4□□□□□ -0.1
PTPN7-218ENST00000496197 FOXN3O00409 490 aaPredicted RBP14.4□□□□□ -0.1
PTPN7-218ENST00000496197 TEX28O15482 410 aa14.4□□□□□ -0.1
PTPN7-218ENST00000496197 VNN2O95498 520 aa14.4□□□□□ -0.1
PTPN7-218ENST00000496197 ADCY5O95622 1261 aa14.4□□□□□ -0.1
PTPN7-218ENST00000496197 CNPP09543 421 aaKnown RBP14.4□□□□□ -0.1
PTPN7-218ENST00000496197 GNL1P36915 607 aaPredicted RBP14.4□□□□□ -0.1
PTPN7-218ENST00000496197 MFAP3P55082 362 aa14.4□□□□□ -0.1
PTPN7-218ENST00000496197 GOLGA8FQ08AF8 430 aa14.4□□□□□ -0.1
PTPN7-218ENST00000496197 GOLGA8DPQ0D2H9 430 aa14.4□□□□□ -0.1
PTPN7-218ENST00000496197 ZNF697Q5TEC3 545 aa14.4□□□□□ -0.1
PTPN7-218ENST00000496197 E4F1Q66K89 784 aaPredicted RBP14.4□□□□□ -0.1
PTPN7-218ENST00000496197 ZNF280DQ6N043 979 aa14.4□□□□□ -0.1
PTPN7-218ENST00000496197 ANKS3Q6ZW76 656 aa14.4□□□□□ -0.1
PTPN7-218ENST00000496197 ACOT1Q86TX2 421 aa14.4□□□□□ -0.1
PTPN7-218ENST00000496197 METTL23Q86XA0 190 aa14.4□□□□□ -0.1
PTPN7-218ENST00000496197 MRPL43Q8N983 215 aaKnown RBP14.4□□□□□ -0.1
PTPN7-218ENST00000496197 SLC4A11Q8NBS3 891 aa14.4□□□□□ -0.1
PTPN7-218ENST00000496197 MRFAP1L1Q96HT8 127 aa14.4□□□□□ -0.1
PTPN7-218ENST00000496197 SNX25Q9H3E2 840 aa14.4□□□□□ -0.1
PTPN7-218ENST00000496197 RXFP1Q9HBX9 757 aa14.4□□□□□ -0.1
PTPN7-218ENST00000496197 MRPL17Q9NRX2 175 aaKnown RBP14.4□□□□□ -0.1
PTPN7-218ENST00000496197 CNTN6Q9UQ52 1028 aa14.4□□□□□ -0.1
PTPN7-218ENST00000496197 PCDHB4Q9Y5E5 795 aa14.4□□□□□ -0.1
PTPN7-218ENST00000496197 IRAK3Q9Y616 596 aa14.4□□□□□ -0.1
PTPN7-218ENST00000496197 PATJQ8NI35 1801 aa14.4□□□□□ -0.1
PTPN7-218ENST00000496197 WDR27A2RRH5 827 aa14.39□□□□□ -0.11
PTPN7-218ENST00000496197 MYBPHLA2RUH7 354 aa14.39□□□□□ -0.11
PTPN7-218ENST00000496197 TRIM21P19474 475 aaKnown RBP14.39□□□□□ -0.11
PTPN7-218ENST00000496197 OR1D2P34982 312 aa14.39□□□□□ -0.11
PTPN7-218ENST00000496197 GTF2F1P35269 517 aaKnown RBP eCLIP14.39□□□□□ -0.111e-6■□□□□ 10.7
PTPN7-218ENST00000496197 LHX1P48742 406 aa14.39□□□□□ -0.11
PTPN7-218ENST00000496197 FXR1P51114 621 aaKnown RBP eCLIP14.39□□□□□ -0.11
PTPN7-218ENST00000496197 ZNF132P52740 706 aa14.39□□□□□ -0.11
PTPN7-218ENST00000496197 ROR1Q01973 937 aa14.39□□□□□ -0.11
PTPN7-218ENST00000496197 SMC1AQ14683 1233 aaKnown RBP14.39□□□□□ -0.11
PTPN7-218ENST00000496197 SPECC1LQ69YQ0 1117 aa14.39□□□□□ -0.11
PTPN7-218ENST00000496197 SLC8B1Q6J4K2 584 aa14.39□□□□□ -0.11
PTPN7-218ENST00000496197 TMEM270Q6UE05 265 aa14.39□□□□□ -0.11
PTPN7-218ENST00000496197 TMC6Q7Z403 805 aa14.39□□□□□ -0.11
PTPN7-218ENST00000496197 C12orf29Q8N999 325 aa14.39□□□□□ -0.11
PTPN7-218ENST00000496197 RBBP8NLQ8NC74 664 aaPredicted RBP14.39□□□□□ -0.11
PTPN7-218ENST00000496197 KLHL5Q96PQ7 755 aa14.39□□□□□ -0.11
PTPN7-218ENST00000496197 SYT15Q9BQS2 421 aa14.39□□□□□ -0.11
PTPN7-218ENST00000496197 ZSWIM1Q9BR11 485 aa14.39□□□□□ -0.11
PTPN7-218ENST00000496197 ZCWPW1Q9H0M4 648 aa14.39□□□□□ -0.11
PTPN7-218ENST00000496197 CEP72Q9P209 647 aa14.39□□□□□ -0.11
PTPN7-218ENST00000496197 GTF3C4Q9UKN8 822 aa14.39□□□□□ -0.11
PTPN7-218ENST00000496197 BACE2Q9Y5Z0 518 aa14.39□□□□□ -0.11
PTPN7-218ENST00000496197 EYSQ5T1H1 3165 aa14.39□□□□□ -0.11
PTPN7-218ENST00000496197 PER2O15055 1255 aa14.38□□□□□ -0.11
PTPN7-218ENST00000496197 TPM3P06753 285 aa14.38□□□□□ -0.11
PTPN7-218ENST00000496197 FAM163BP0C2L3 166 aa14.38□□□□□ -0.11
PTPN7-218ENST00000496197 CLCN1P35523 988 aa14.38□□□□□ -0.11
PTPN7-218ENST00000496197 ARPP19P56211 112 aa14.38□□□□□ -0.11
PTPN7-218ENST00000496197 RBM10P98175 930 aaKnown RBP14.38□□□□□ -0.11
PTPN7-218ENST00000496197 FIGNQ5HY92 759 aa14.38□□□□□ -0.11
PTPN7-218ENST00000496197 INTS6LQ5JSJ4 861 aaKnown RBP14.38□□□□□ -0.11
PTPN7-218ENST00000496197 RNF19BQ6ZMZ0 732 aa14.38□□□□□ -0.11
PTPN7-218ENST00000496197 ENOSF1Q7L5Y1 443 aa14.38□□□□□ -0.11
PTPN7-218ENST00000496197 TTC9BQ8N6N2 239 aa14.38□□□□□ -0.11
PTPN7-218ENST00000496197 B3GALNT2Q8NCR0 500 aa14.38□□□□□ -0.11
PTPN7-218ENST00000496197 SPATA18Q8TC71 538 aa14.38□□□□□ -0.11
PTPN7-218ENST00000496197 MICAL1Q8TDZ2 1067 aa14.38□□□□□ -0.11
PTPN7-218ENST00000496197 CPLX3Q8WVH0 158 aa14.38□□□□□ -0.11
PTPN7-218ENST00000496197 MRPL38Q96DV4 380 aaKnown RBP14.38□□□□□ -0.11
PTPN7-218ENST00000496197 PGLYRP2Q96PD5 576 aa14.38□□□□□ -0.11
PTPN7-218ENST00000496197 ACBD6Q9BR61 282 aa14.38□□□□□ -0.11
PTPN7-218ENST00000496197 STK33Q9BYT3 514 aa14.38□□□□□ -0.11
PTPN7-218ENST00000496197 RHOBTB2Q9BYZ6 727 aa14.38□□□□□ -0.11
PTPN7-218ENST00000496197 LMAN2LQ9H0V9 348 aa14.38□□□□□ -0.11
PTPN7-218ENST00000496197 CRISPLD1Q9H336 500 aa14.38□□□□□ -0.11
PTPN7-218ENST00000496197 NGRNQ9NPE2 291 aaKnown RBP14.38□□□□□ -0.11
PTPN7-218ENST00000496197 FNIP2Q9P278 1114 aa14.38□□□□□ -0.11
PTPN7-218ENST00000496197 STK39Q9UEW8 545 aa14.38□□□□□ -0.11
PTPN7-218ENST00000496197 GREB1Q4ZG55 1949 aa14.38□□□□□ -0.11
PTPN7-218ENST00000496197 PRRC2BQ5JSZ5 2229 aaKnown RBP14.38□□□□□ -0.11
PTPN7-218ENST00000496197 ARHGEF37A1IGU5 675 aa14.38□□□□□ -0.11
PTPN7-218ENST00000496197 LRRC53A6NM62 1247 aa14.38□□□□□ -0.11
PTPN7-218ENST00000496197 H7C4K7 107 aa14.38□□□□□ -0.11
PTPN7-218ENST00000496197 CYP26A1O43174 497 aa14.38□□□□□ -0.11
PTPN7-218ENST00000496197 KRT5P13647 590 aa14.38□□□□□ -0.11
PTPN7-218ENST00000496197 CCDC130P13994 396 aa14.38□□□□□ -0.11
PTPN7-218ENST00000496197 PTPN1P18031 435 aaKnown RBP14.38□□□□□ -0.11
PTPN7-218ENST00000496197 RFX1P22670 979 aa14.38□□□□□ -0.11
PTPN7-218ENST00000496197 CASP14P31944 242 aa14.38□□□□□ -0.11
PTPN7-218ENST00000496197 SSTR3P32745 418 aaPredicted RBP14.38□□□□□ -0.11
PTPN7-218ENST00000496197 USP8P40818 1118 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms