RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 MOSPD3O75425 235 aa19.31■□□□□ 0.68
COL20A1-207ENST00000494913 CST3P01034 146 aaPredicted RBP19.31■□□□□ 0.68
COL20A1-207ENST00000494913 ACAT1P24752 427 aaKnown RBP19.31■□□□□ 0.68
COL20A1-207ENST00000494913 CASP4P49662 377 aa19.31■□□□□ 0.68
COL20A1-207ENST00000494913 MYL7Q01449 175 aa19.31■□□□□ 0.68
COL20A1-207ENST00000494913 ASTLQ6HA08 431 aaPredicted RBP19.31■□□□□ 0.68
COL20A1-207ENST00000494913 OSTM1Q86WC4 334 aa19.31■□□□□ 0.68
COL20A1-207ENST00000494913 ADGRF2Q8IZF7 708 aa19.31■□□□□ 0.68
COL20A1-207ENST00000494913 FAM200AQ8TCP9 573 aa19.31■□□□□ 0.68
COL20A1-207ENST00000494913 SPPL2BQ8TCT7 592 aa19.31■□□□□ 0.68
COL20A1-207ENST00000494913 ZNF516Q92618 1163 aa19.31■□□□□ 0.68
COL20A1-207ENST00000494913 CCDC34Q96HJ3 373 aa19.31■□□□□ 0.68
COL20A1-207ENST00000494913 ZSWIM3Q96MP5 696 aa19.31■□□□□ 0.68
COL20A1-207ENST00000494913 LRRC3Q9BY71 257 aa19.31■□□□□ 0.68
COL20A1-207ENST00000494913 GZF1Q9H116 711 aaPredicted RBP19.31■□□□□ 0.68
COL20A1-207ENST00000494913 SLC2A4RGQ9NR83 387 aa19.31■□□□□ 0.68
COL20A1-207ENST00000494913 TMLHEQ9NVH6 421 aa19.31■□□□□ 0.68
COL20A1-207ENST00000494913 MAPK8IP1Q9UQF2 711 aa19.31■□□□□ 0.68
COL20A1-207ENST00000494913 PCDHB5Q9Y5E4 795 aa19.31■□□□□ 0.68
COL20A1-207ENST00000494913 KRBA1A5PL33 1030 aa19.3■□□□□ 0.68
COL20A1-207ENST00000494913 STK25O00506 426 aa19.3■□□□□ 0.68
COL20A1-207ENST00000494913 KIF20AO95235 890 aa19.3■□□□□ 0.68
COL20A1-207ENST00000494913 NR3C1P04150 777 aa19.3■□□□□ 0.68
COL20A1-207ENST00000494913 NPR3P17342 541 aa19.3■□□□□ 0.68
COL20A1-207ENST00000494913 PLA2G5P39877 138 aa19.3■□□□□ 0.68
COL20A1-207ENST00000494913 LHX1P48742 406 aa19.3■□□□□ 0.68
COL20A1-207ENST00000494913 TEAD2Q15562 447 aa19.3■□□□□ 0.68
COL20A1-207ENST00000494913 FAM78AQ5JUQ0 283 aa19.3■□□□□ 0.68
COL20A1-207ENST00000494913 TANGO2Q6ICL3 276 aa19.3■□□□□ 0.68
COL20A1-207ENST00000494913 DPH6Q7L8W6 267 aa19.3■□□□□ 0.68
COL20A1-207ENST00000494913 ITIH5Q86UX2 942 aa19.3■□□□□ 0.68
COL20A1-207ENST00000494913 TMC8Q8IU68 726 aa19.3■□□□□ 0.68
COL20A1-207ENST00000494913 SLC9A9Q8IVB4 645 aa19.3■□□□□ 0.68
COL20A1-207ENST00000494913 FMR1NBQ8N0W7 255 aaPredicted RBP19.3■□□□□ 0.68
COL20A1-207ENST00000494913 SHKBP1Q8TBC3 707 aa19.3■□□□□ 0.68
COL20A1-207ENST00000494913 SPATA18Q8TC71 538 aa19.3■□□□□ 0.68
COL20A1-207ENST00000494913 PSMG2Q969U7 264 aa19.3■□□□□ 0.68
COL20A1-207ENST00000494913 MMS19Q96T76 1030 aa19.3■□□□□ 0.68
COL20A1-207ENST00000494913 LPIN3Q9BQK8 851 aa19.3■□□□□ 0.68
COL20A1-207ENST00000494913 A0A1W2PRU2 124 aa19.29■□□□□ 0.68
COL20A1-207ENST00000494913 GABRDO14764 452 aa19.29■□□□□ 0.68
COL20A1-207ENST00000494913 HCRTO43612 131 aa19.29■□□□□ 0.68
COL20A1-207ENST00000494913 ECI2O75521 394 aa19.29■□□□□ 0.68
COL20A1-207ENST00000494913 HAPLN1P10915 354 aaPredicted RBP19.29■□□□□ 0.68
COL20A1-207ENST00000494913 CLCN5P51795 746 aa19.29■□□□□ 0.68
COL20A1-207ENST00000494913 KCNB1Q14721 858 aa19.29■□□□□ 0.68
COL20A1-207ENST00000494913 NFE2Q16621 373 aaPredicted RBP19.29■□□□□ 0.68
COL20A1-207ENST00000494913 LIMS2Q7Z4I7 341 aa19.29■□□□□ 0.68
COL20A1-207ENST00000494913 TMEM105Q8N8V8 129 aa19.29■□□□□ 0.68
COL20A1-207ENST00000494913 PLEKHO2Q8TD55 490 aa19.29■□□□□ 0.68
COL20A1-207ENST00000494913 GIPC2Q8TF65 315 aa19.29■□□□□ 0.68
COL20A1-207ENST00000494913 TMEM174Q8WUU8 243 aa19.29■□□□□ 0.68
COL20A1-207ENST00000494913 PLA2G2FQ9BZM2 168 aa19.29■□□□□ 0.68
COL20A1-207ENST00000494913 SLITRK6Q9H5Y7 841 aa19.29■□□□□ 0.68
COL20A1-207ENST00000494913 CALUO43852 315 aaPredicted RBP19.28■□□□□ 0.68
COL20A1-207ENST00000494913 PHACTR2O75167 634 aa19.28■□□□□ 0.68
COL20A1-207ENST00000494913 ATF6P18850 670 aa19.28■□□□□ 0.68
COL20A1-207ENST00000494913 PCSK1P29120 753 aa19.28■□□□□ 0.68
COL20A1-207ENST00000494913 TRPC3Q13507 836 aa19.28■□□□□ 0.68
COL20A1-207ENST00000494913 PNOCQ13519 176 aa19.28■□□□□ 0.68
COL20A1-207ENST00000494913 VEPH1Q14D04 833 aa19.28■□□□□ 0.68
COL20A1-207ENST00000494913 TAF12Q16514 161 aa19.28■□□□□ 0.68
COL20A1-207ENST00000494913 INTS6LQ5JSJ4 861 aaKnown RBP19.28■□□□□ 0.68
COL20A1-207ENST00000494913 PARD3BQ8TEW8 1205 aa19.28■□□□□ 0.68
COL20A1-207ENST00000494913 SMARCD2Q92925 531 aa19.28■□□□□ 0.68
COL20A1-207ENST00000494913 ELSPBP1Q96BH3 223 aa19.28■□□□□ 0.68
COL20A1-207ENST00000494913 ASB16Q96NS5 453 aa19.28■□□□□ 0.68
COL20A1-207ENST00000494913 PRRX2Q99811 253 aa19.28■□□□□ 0.68
COL20A1-207ENST00000494913 PI4K2AQ9BTU6 479 aa19.28■□□□□ 0.68
COL20A1-207ENST00000494913 ZFP14Q9HCL3 533 aa19.28■□□□□ 0.68
COL20A1-207ENST00000494913 ZNF334Q9HCZ1 680 aaPredicted RBP19.28■□□□□ 0.68
COL20A1-207ENST00000494913 GTF3C4Q9UKN8 822 aa19.28■□□□□ 0.68
COL20A1-207ENST00000494913 CIZ1Q9ULV3 898 aaPredicted RBP19.28■□□□□ 0.68
COL20A1-207ENST00000494913 RFX1P22670 979 aa19.28■□□□□ 0.68
COL20A1-207ENST00000494913 LMO2P25791 158 aa19.28■□□□□ 0.68
COL20A1-207ENST00000494913 MYL6P60660 151 aa19.28■□□□□ 0.68
COL20A1-207ENST00000494913 SNW1Q13573 536 aaKnown RBP19.28■□□□□ 0.68
COL20A1-207ENST00000494913 WDR72Q3MJ13 1102 aa19.28■□□□□ 0.68
COL20A1-207ENST00000494913 CEP135Q66GS9 1140 aa19.28■□□□□ 0.68
COL20A1-207ENST00000494913 CWF19L1Q69YN2 538 aaKnown RBP19.28■□□□□ 0.68
COL20A1-207ENST00000494913 GAREM2Q75VX8 874 aa19.28■□□□□ 0.68
COL20A1-207ENST00000494913 PRSS33Q8NF86 280 aa19.28■□□□□ 0.68
COL20A1-207ENST00000494913 ZSCAN18Q8TBC5 510 aaPredicted RBP19.28■□□□□ 0.68
COL20A1-207ENST00000494913 KBTBD7Q8WVZ9 684 aa19.28■□□□□ 0.68
COL20A1-207ENST00000494913 GPR88Q9GZN0 384 aa19.28■□□□□ 0.68
COL20A1-207ENST00000494913 ATXN3LQ9H3M9 355 aa19.28■□□□□ 0.68
COL20A1-207ENST00000494913 ARHGEF3Q9NR81 526 aa19.28■□□□□ 0.68
COL20A1-207ENST00000494913 TRAF3IP3Q9Y228 551 aa19.28■□□□□ 0.68
COL20A1-207ENST00000494913 FRMD4BQ9Y2L6 1034 aa19.28■□□□□ 0.68
COL20A1-207ENST00000494913 KMT2EQ8IZD2 1858 aa19.27■□□□□ 0.68
COL20A1-207ENST00000494913 LRRIQ3A6PVS8 624 aaPredicted RBP19.27■□□□□ 0.67
COL20A1-207ENST00000494913 PI15O43692 258 aa19.27■□□□□ 0.67
COL20A1-207ENST00000494913 ATP2C2O75185 946 aa19.27■□□□□ 0.67
COL20A1-207ENST00000494913 FGF19O95750 216 aa19.27■□□□□ 0.67
COL20A1-207ENST00000494913 PDGFRBP09619 1106 aa19.27■□□□□ 0.67
COL20A1-207ENST00000494913 FCARP24071 287 aa19.27■□□□□ 0.67
COL20A1-207ENST00000494913 CYP2F1P24903 491 aa19.27■□□□□ 0.67
COL20A1-207ENST00000494913 GABRR2P28476 465 aa19.27■□□□□ 0.67
COL20A1-207ENST00000494913 CLDN10P78369 228 aa19.27■□□□□ 0.67
COL20A1-207ENST00000494913 BIRC3Q13489 604 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms