RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 KLRC2P26717 231 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 COPB2P35606 906 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 ZNF132P52740 706 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 BACE1P56817 501 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 NOP14P78316 857 aaKnown RBP12.13□□□□□ -0.47
RFC4-214ENST00000494047 ELF3P78545 371 aaPredicted RBP12.13□□□□□ -0.47
RFC4-214ENST00000494047 IFI35P80217 286 aaPredicted RBP12.13□□□□□ -0.47
RFC4-214ENST00000494047 MAMLD1Q13495 774 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 UGCGQ16739 394 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 KYAT1Q16773 422 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 GALNTL6Q49A17 601 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 TFDP3Q5H9I0 405 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 FYB2Q5VWT5 728 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 SLC39A4Q6P5W5 647 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 ABHD15Q6UXT9 468 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 NSMFQ6X4W1 530 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 SLC30A10Q6XR72 485 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 BRSK2Q8IWQ3 736 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 CPXCR1Q8N123 301 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 AGGF1Q8N302 714 aaeCLIP12.13□□□□□ -0.47
RFC4-214ENST00000494047 RBBP8NLQ8NC74 664 aaPredicted RBP12.13□□□□□ -0.47
RFC4-214ENST00000494047 PROCA1Q8NCQ7 364 aaPredicted RBP12.13□□□□□ -0.47
RFC4-214ENST00000494047 ZNF280CQ8ND82 737 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 C1orf54Q8WWF1 131 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 INPP5DQ92835 1189 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 RBM15Q96T37 977 aaKnown RBP eCLIP12.13□□□□□ -0.47
RFC4-214ENST00000494047 NIFKQ9BYG3 293 aaKnown RBP12.13□□□□□ -0.47
RFC4-214ENST00000494047 IKZF4Q9H2S9 585 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 RPAP3Q9H6T3 665 aaPredicted RBP12.13□□□□□ -0.47
RFC4-214ENST00000494047 BCAS3Q9H6U6 928 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 POLD4Q9HCU8 107 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 KCNK9Q9NPC2 374 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 GPRC5CQ9NQ84 441 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 AAASQ9NRG9 546 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 NRBP2Q9NSY0 501 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.13□□□□□ -0.47
RFC4-214ENST00000494047 NOP53Q9NZM5 478 aaKnown RBP12.13□□□□□ -0.47
RFC4-214ENST00000494047 PKD2L1Q9P0L9 805 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 PSMC3IPQ9P2W1 217 aaPredicted RBP12.13□□□□□ -0.47
RFC4-214ENST00000494047 TPX2Q9ULW0 747 aaKnown RBP12.13□□□□□ -0.47
RFC4-214ENST00000494047 PCDHB4Q9Y5E5 795 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 USH1CQ9Y6N9 552 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 SMIM23A6NLE4 172 aa12.12□□□□□ -0.47
RFC4-214ENST00000494047 SPATA31C2B4DYI2 1134 aa12.12□□□□□ -0.47
RFC4-214ENST00000494047 RASA4BC9J798 803 aa12.12□□□□□ -0.47
RFC4-214ENST00000494047 PDHXO00330 501 aa12.12□□□□□ -0.47
RFC4-214ENST00000494047 TM9SF1O15321 606 aa12.12□□□□□ -0.47
RFC4-214ENST00000494047 RASA4O43374 803 aa12.12□□□□□ -0.47
RFC4-214ENST00000494047 LIASO43766 372 aa12.12□□□□□ -0.47
RFC4-214ENST00000494047 ATG7O95352 703 aa12.12□□□□□ -0.47
RFC4-214ENST00000494047 ATP6V1G2O95670 118 aa12.12□□□□□ -0.47
RFC4-214ENST00000494047 GNRH1P01148 92 aa12.12□□□□□ -0.47
RFC4-214ENST00000494047 LMNAP02545 664 aaKnown RBP12.12□□□□□ -0.47
RFC4-214ENST00000494047 NQO1P15559 274 aaKnown RBP12.12□□□□□ -0.47
RFC4-214ENST00000494047 ACO1P21399 889 aaKnown RBP12.12□□□□□ -0.47
RFC4-214ENST00000494047 MAGEA4P43358 317 aa12.12□□□□□ -0.47
RFC4-214ENST00000494047 YARSP54577 528 aaKnown RBP12.12□□□□□ -0.47
RFC4-214ENST00000494047 VCPP55072 806 aaKnown RBP12.12□□□□□ -0.47
RFC4-214ENST00000494047 ACTR2P61160 394 aa12.12□□□□□ -0.47
RFC4-214ENST00000494047 BNIP1Q12981 228 aa12.12□□□□□ -0.47
RFC4-214ENST00000494047 SPP2Q13103 211 aa12.12□□□□□ -0.47
RFC4-214ENST00000494047 CBLBQ13191 982 aa12.12□□□□□ -0.47
RFC4-214ENST00000494047 LONRF1Q17RB8 773 aa12.12□□□□□ -0.47
RFC4-214ENST00000494047 PARP6Q2NL67 630 aa12.12□□□□□ -0.47
RFC4-214ENST00000494047 PLA2G4FQ68DD2 849 aa12.12□□□□□ -0.47
RFC4-214ENST00000494047 DNAJC24Q6P3W2 148 aa12.12□□□□□ -0.47
RFC4-214ENST00000494047 VSTM1Q6UX27 236 aa12.12□□□□□ -0.47
RFC4-214ENST00000494047 C4orf22Q6V702 233 aa12.12□□□□□ -0.47
RFC4-214ENST00000494047 APLFQ8IW19 511 aaPredicted RBP12.12□□□□□ -0.47
RFC4-214ENST00000494047 THNSL1Q8IYQ7 743 aa12.12□□□□□ -0.47
RFC4-214ENST00000494047 ZDHHC14Q8IZN3 488 aa12.12□□□□□ -0.47
RFC4-214ENST00000494047 ALLCQ8N6M5 410 aa12.12□□□□□ -0.47
RFC4-214ENST00000494047 ATP11CQ8NB49 1132 aa12.12□□□□□ -0.47
RFC4-214ENST00000494047 KLHL29Q96CT2 875 aa12.12□□□□□ -0.47
RFC4-214ENST00000494047 TMEM237Q96Q45 408 aa12.12□□□□□ -0.47
RFC4-214ENST00000494047 PARK7Q99497 189 aaKnown RBP12.12□□□□□ -0.47
RFC4-214ENST00000494047 MSTO1Q9BUK6 570 aa12.12□□□□□ -0.47
RFC4-214ENST00000494047 R3HDMLQ9H3Y0 253 aa12.12□□□□□ -0.47
RFC4-214ENST00000494047 DHX33Q9H6R0 707 aaKnown RBP12.12□□□□□ -0.47
RFC4-214ENST00000494047 ZNF302Q9NR11 478 aa12.12□□□□□ -0.47
RFC4-214ENST00000494047 HOXC10Q9NYD6 342 aa12.12□□□□□ -0.47
RFC4-214ENST00000494047 EURLQ9NYK6 297 aa12.12□□□□□ -0.47
RFC4-214ENST00000494047 ADAMTS5Q9UNA0 930 aa12.12□□□□□ -0.47
RFC4-214ENST00000494047 MAFBQ9Y5Q3 323 aaPredicted RBP12.12□□□□□ -0.47
RFC4-214ENST00000494047 A0A0B4J269 797 aa12.11□□□□□ -0.47
RFC4-214ENST00000494047 LOC102724159A0A0B4J2E5 919 aa12.11□□□□□ -0.47
RFC4-214ENST00000494047 TCP11X1B4DZS4 312 aa12.11□□□□□ -0.47
RFC4-214ENST00000494047 TISP43B9A030 160 aa12.11□□□□□ -0.47
RFC4-214ENST00000494047 TGFB3P10600 412 aa12.11□□□□□ -0.47
RFC4-214ENST00000494047 TAL1P17542 331 aaPredicted RBP12.11□□□□□ -0.47
RFC4-214ENST00000494047 DSG3P32926 999 aa12.11□□□□□ -0.47
RFC4-214ENST00000494047 SLCO1A2P46721 670 aa12.11□□□□□ -0.47
RFC4-214ENST00000494047 KCNJ1P48048 391 aa12.11□□□□□ -0.47
RFC4-214ENST00000494047 ARL4CP56559 192 aa12.11□□□□□ -0.47
RFC4-214ENST00000494047 MOGSQ13724 837 aa12.11□□□□□ -0.47
RFC4-214ENST00000494047 NCOA4Q13772 614 aa12.11□□□□□ -0.47
RFC4-214ENST00000494047 MXD4Q14582 209 aaPredicted RBP12.11□□□□□ -0.47
RFC4-214ENST00000494047 PWP2Q15269 919 aaKnown RBP12.11□□□□□ -0.47
RFC4-214ENST00000494047 STXBP2Q15833 593 aa12.11□□□□□ -0.47
RFC4-214ENST00000494047 SGSM1Q2NKQ1 1148 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms