RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 PDE1AP54750 535 aa5.54□□□□□ -1.52
SMC4-223ENST00000493695 EEFSECP57772 596 aaKnown RBP5.54□□□□□ -1.52
SMC4-223ENST00000493695 RABEP1Q15276 862 aa5.54□□□□□ -1.52
SMC4-223ENST00000493695 UAP1L1Q3KQV9 507 aa5.54□□□□□ -1.52
SMC4-223ENST00000493695 PCID2Q5JVF3 399 aa5.54□□□□□ -1.52
SMC4-223ENST00000493695 TEDDM1Q5T9Z0 273 aa5.54□□□□□ -1.52
SMC4-223ENST00000493695 ZNF804AQ7Z570 1209 aa5.54□□□□□ -1.52
SMC4-223ENST00000493695 CNTD1Q8N815 330 aa5.54□□□□□ -1.52
SMC4-223ENST00000493695 PNLDC1Q8NA58 520 aaKnown RBP5.54□□□□□ -1.52
SMC4-223ENST00000493695 MRGPRX4Q96LA9 322 aa5.54□□□□□ -1.52
SMC4-223ENST00000493695 WACQ9BTA9 647 aa5.54□□□□□ -1.52
SMC4-223ENST00000493695 BRIP1Q9BX63 1249 aa5.54□□□□□ -1.52
SMC4-223ENST00000493695 SPRTNQ9H040 489 aaPredicted RBP5.54□□□□□ -1.52
SMC4-223ENST00000493695 MRPS18AQ9NVS2 196 aaKnown RBP5.54□□□□□ -1.52
SMC4-223ENST00000493695 CFAP97Q9P2B7 532 aa5.54□□□□□ -1.52
SMC4-223ENST00000493695 CCNL1Q9UK58 526 aaPredicted RBP5.54□□□□□ -1.52
SMC4-223ENST00000493695 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.54□□□□□ -1.52
SMC4-223ENST00000493695 CACNA1IQ9P0X4 2223 aa5.54□□□□□ -1.52
SMC4-223ENST00000493695 KLHL33A6NCF5 533 aa5.53□□□□□ -1.52
SMC4-223ENST00000493695 PRRT4C9JH25 899 aa5.53□□□□□ -1.52
SMC4-223ENST00000493695 F2RL2O00254 374 aa5.53□□□□□ -1.52
SMC4-223ENST00000493695 DNAJB5O75953 348 aa5.53□□□□□ -1.52
SMC4-223ENST00000493695 KIF20AO95235 890 aa5.53□□□□□ -1.52
SMC4-223ENST00000493695 JUPP14923 745 aa5.53□□□□□ -1.52
SMC4-223ENST00000493695 LPOP22079 712 aaPredicted RBP5.53□□□□□ -1.52
SMC4-223ENST00000493695 ZNF260Q3ZCT1 412 aa5.53□□□□□ -1.52
SMC4-223ENST00000493695 PXDC1Q5TGL8 231 aa5.53□□□□□ -1.52
SMC4-223ENST00000493695 VPS53Q5VIR6 699 aa5.53□□□□□ -1.52
SMC4-223ENST00000493695 GIMAP6Q6P9H5 292 aa5.53□□□□□ -1.52
SMC4-223ENST00000493695 NAPRTQ6XQN6 538 aa5.53□□□□□ -1.52
SMC4-223ENST00000493695 TECPR1Q7Z6L1 1165 aa5.53□□□□□ -1.52
SMC4-223ENST00000493695 PDSS2Q86YH6 399 aa5.53□□□□□ -1.52
SMC4-223ENST00000493695 TBC1D5Q92609 795 aa5.53□□□□□ -1.52
SMC4-223ENST00000493695 RGMAQ96B86 450 aa5.53□□□□□ -1.52
SMC4-223ENST00000493695 CAMKK2Q96RR4 588 aa5.53□□□□□ -1.52
SMC4-223ENST00000493695 KRTAP1-5Q9BYS1 174 aa5.53□□□□□ -1.52
SMC4-223ENST00000493695 SIK2Q9H0K1 926 aa5.53□□□□□ -1.52
SMC4-223ENST00000493695 VPS16Q9H269 839 aa5.53□□□□□ -1.52
SMC4-223ENST00000493695 IPPQ9Y573 584 aa5.53□□□□□ -1.52
SMC4-223ENST00000493695 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.52□□□□□ -1.53
SMC4-223ENST00000493695 TLDC2A0PJX2 215 aa5.52□□□□□ -1.53
SMC4-223ENST00000493695 TRIM75PA6NK02 468 aa5.52□□□□□ -1.53
SMC4-223ENST00000493695 TISP43B9A030 160 aa5.52□□□□□ -1.53
SMC4-223ENST00000493695 SOAT2O75908 522 aa5.52□□□□□ -1.53
SMC4-223ENST00000493695 LATS1O95835 1130 aa5.52□□□□□ -1.53
SMC4-223ENST00000493695 CHEK2O96017 543 aa5.52□□□□□ -1.53
SMC4-223ENST00000493695 TUBB4AP04350 444 aa5.52□□□□□ -1.53
SMC4-223ENST00000493695 SNHG28P0DPA3 235 aa5.52□□□□□ -1.53
SMC4-223ENST00000493695 ENGP17813 658 aa5.52□□□□□ -1.53
SMC4-223ENST00000493695 POU3F3P20264 500 aaPredicted RBP5.52□□□□□ -1.53
SMC4-223ENST00000493695 MALP21145 153 aa5.52□□□□□ -1.53
SMC4-223ENST00000493695 HSD3B2P26439 372 aa5.52□□□□□ -1.53
SMC4-223ENST00000493695 TKTP29401 623 aaKnown RBP5.52□□□□□ -1.53
SMC4-223ENST00000493695 CYP2C19P33261 490 aa5.52□□□□□ -1.53
SMC4-223ENST00000493695 CLCN2P51788 898 aa5.52□□□□□ -1.53
SMC4-223ENST00000493695 HABP2Q14520 560 aaPredicted RBP5.52□□□□□ -1.53
SMC4-223ENST00000493695 ZNF618Q5T7W0 954 aa5.52□□□□□ -1.53
SMC4-223ENST00000493695 MIS18BP1Q6P0N0 1132 aa5.52□□□□□ -1.53
SMC4-223ENST00000493695 SLC4A10Q6U841 1118 aa5.52□□□□□ -1.53
SMC4-223ENST00000493695 TTC7BQ86TV6 843 aa5.52□□□□□ -1.53
SMC4-223ENST00000493695 LRRC71Q8N4P6 559 aa5.52□□□□□ -1.53
SMC4-223ENST00000493695 TNPO1Q92973 898 aaKnown RBP5.52□□□□□ -1.53
SMC4-223ENST00000493695 HMCESQ96FZ2 354 aa5.52□□□□□ -1.53
SMC4-223ENST00000493695 ETAA1Q9NY74 926 aa5.52□□□□□ -1.53
SMC4-223ENST00000493695 SLC5A4Q9NY91 659 aa5.52□□□□□ -1.53
SMC4-223ENST00000493695 TMA7Q9Y2S6 64 aaKnown RBP5.52□□□□□ -1.53
SMC4-223ENST00000493695 MRFAP1Q9Y605 127 aa5.52□□□□□ -1.53
SMC4-223ENST00000493695 CNTNAP2Q9UHC6 1331 aa5.51□□□□□ -1.53
SMC4-223ENST00000493695 H0YIZ8 118 aa5.51□□□□□ -1.53
SMC4-223ENST00000493695 KCNAB3O43448 404 aa5.51□□□□□ -1.53
SMC4-223ENST00000493695 GNAI2P04899 355 aa5.51□□□□□ -1.53
SMC4-223ENST00000493695 CBSLP0DN79 551 aa5.51□□□□□ -1.53
SMC4-223ENST00000493695 MYBL2P10244 700 aa5.51□□□□□ -1.53
SMC4-223ENST00000493695 CBSP35520 551 aa5.51□□□□□ -1.53
SMC4-223ENST00000493695 SNAPC2Q13487 334 aa5.51□□□□□ -1.53
SMC4-223ENST00000493695 AARS2Q5JTZ9 985 aaKnown RBP5.51□□□□□ -1.53
SMC4-223ENST00000493695 AWAT2Q6E213 333 aa5.51□□□□□ -1.53
SMC4-223ENST00000493695 PRSS3P2Q8NHM4 247 aa5.51□□□□□ -1.53
SMC4-223ENST00000493695 REPS1Q96D71 796 aa5.51□□□□□ -1.53
SMC4-223ENST00000493695 C5orf34Q96MH7 638 aa5.51□□□□□ -1.53
SMC4-223ENST00000493695 M0QYG6 137 aa5.5□□□□□ -1.53
SMC4-223ENST00000493695 GCLCP48506 637 aaPredicted RBP5.5□□□□□ -1.53
SMC4-223ENST00000493695 LRRC41Q15345 812 aa5.5□□□□□ -1.53
SMC4-223ENST00000493695 TREML2Q5T2D2 321 aa5.5□□□□□ -1.53
SMC4-223ENST00000493695 ANKRD16Q6P6B7 361 aa5.5□□□□□ -1.53
SMC4-223ENST00000493695 LAYNQ6UX15 382 aa5.5□□□□□ -1.53
SMC4-223ENST00000493695 TMEM108Q6UXF1 575 aa5.5□□□□□ -1.53
SMC4-223ENST00000493695 C1orf162Q8NEQ5 155 aaPredicted RBP5.5□□□□□ -1.53
SMC4-223ENST00000493695 WASF1Q92558 559 aa5.5□□□□□ -1.53
SMC4-223ENST00000493695 FAXDC2Q96IV6 333 aa5.5□□□□□ -1.53
SMC4-223ENST00000493695 C1orf43Q9BWL3 253 aa5.5□□□□□ -1.53
SMC4-223ENST00000493695 SERHLQ9NQF3 203 aa5.5□□□□□ -1.53
SMC4-223ENST00000493695 PDGFCQ9NRA1 345 aa5.5□□□□□ -1.53
SMC4-223ENST00000493695 TUBA8Q9NY65 449 aaPredicted RBP5.5□□□□□ -1.53
SMC4-223ENST00000493695 MCM8Q9UJA3 840 aa5.5□□□□□ -1.53
SMC4-223ENST00000493695 AGAP1Q9UPQ3 857 aa5.5□□□□□ -1.53
SMC4-223ENST00000493695 SMIM35A0A1B0GVV1 85 aa5.49□□□□□ -1.53
SMC4-223ENST00000493695 LRRC14BA6NHZ5 514 aa5.49□□□□□ -1.53
SMC4-223ENST00000493695 NTN1O95631 604 aa5.49□□□□□ -1.53
SMC4-223ENST00000493695 TOP3BO95985 862 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms