RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 CCL5P13501 91 aa7.68□□□□□ -1.18
SMARCE1-211ENST00000493660 GRM5P41594 1212 aa7.68□□□□□ -1.18
SMARCE1-211ENST00000493660 ACOT2P49753 483 aa7.68□□□□□ -1.18
SMARCE1-211ENST00000493660 CCNG1P51959 295 aa7.68□□□□□ -1.18
SMARCE1-211ENST00000493660 SH3BGRP55822 239 aaPredicted RBP7.68□□□□□ -1.18
SMARCE1-211ENST00000493660 ELF3P78545 371 aaPredicted RBP7.68□□□□□ -1.18
SMARCE1-211ENST00000493660 ANKRD20A8PQ5CZ79 823 aa7.68□□□□□ -1.18
SMARCE1-211ENST00000493660 CMPK2Q5EBM0 449 aa7.68□□□□□ -1.18
SMARCE1-211ENST00000493660 CYP26C1Q6V0L0 522 aa7.68□□□□□ -1.18
SMARCE1-211ENST00000493660 CACNA2D4Q7Z3S7 1137 aa7.68□□□□□ -1.18
SMARCE1-211ENST00000493660 CTAGE6Q86UF2 777 aa7.68□□□□□ -1.18
SMARCE1-211ENST00000493660 NT5DC4Q86YG4 428 aa7.68□□□□□ -1.18
SMARCE1-211ENST00000493660 CTAGE4Q8IX94 777 aa7.68□□□□□ -1.18
SMARCE1-211ENST00000493660 LMO3Q8TAP4 145 aa7.68□□□□□ -1.18
SMARCE1-211ENST00000493660 BAP1Q92560 729 aa7.68□□□□□ -1.18
SMARCE1-211ENST00000493660 CCDC127Q96BQ5 260 aa7.68□□□□□ -1.18
SMARCE1-211ENST00000493660 PPP1R16BQ96T49 567 aa7.68□□□□□ -1.18
SMARCE1-211ENST00000493660 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.68□□□□□ -1.183e-7■■■□□ 15.4
SMARCE1-211ENST00000493660 SENP6Q9GZR1 1112 aaPredicted RBP7.68□□□□□ -1.18
SMARCE1-211ENST00000493660 RPF1Q9H9Y2 349 aaKnown RBP7.68□□□□□ -1.18
SMARCE1-211ENST00000493660 DMAP1Q9NPF5 467 aaPredicted RBP7.68□□□□□ -1.18
SMARCE1-211ENST00000493660 STARD7Q9NQZ5 370 aa7.68□□□□□ -1.18
SMARCE1-211ENST00000493660 RABL2BQ9UNT1 228 aa7.68□□□□□ -1.18
SMARCE1-211ENST00000493660 CDY2AQ9Y6F7 541 aa7.68□□□□□ -1.18
SMARCE1-211ENST00000493660 TARSL2A2RTX5 802 aaKnown RBP7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 ARVCFO00192 962 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 C4BPAP04003 597 aaKnown RBP7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 UCHL3P15374 230 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 ALOX15P16050 662 aaPredicted RBP7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 SLC9A1P19634 815 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 GCLMP48507 274 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 TRIM71Q2Q1W2 868 aaKnown RBP7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 ZACNQ401N2 412 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 SH2D4BQ5SQS7 431 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 NCCRP1Q6ZVX7 275 aaPredicted RBP7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 USP38Q8NB14 1042 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 FBXL13Q8NEE6 735 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 CPB2Q96IY4 423 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 ASB7Q9H672 318 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 PLEKHA5Q9HAU0 1116 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 CDHR5Q9HBB8 845 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 CHST12Q9NRB3 414 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 APEX2Q9UBZ4 518 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 PLAGL2Q9UPG8 496 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 ITM2BQ9Y287 266 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 TRIP11Q15643 1979 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 MROH7Q68CQ1 1323 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 RNF225M0QZC1 329 aaPredicted RBP7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 AGPSO00116 658 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 EPHB6O15197 1021 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 RHOXF2BP0C7M4 288 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 STAG3L1P0CL83 205 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 DLATP10515 647 aaKnown RBP7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 TNNI1P19237 187 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 HOXA11P31270 313 aaPredicted RBP7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 JAM2P57087 298 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 POLR2FP61218 127 aaKnown RBP7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 GOLGA8FQ08AF8 430 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 GOLGA8DPQ0D2H9 430 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 ZBTB41Q5SVQ8 909 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 EMC10Q5UCC4 262 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 SV2AQ7L0J3 742 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 ENOSF1Q7L5Y1 443 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 MAATS1Q7Z4T9 603 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 PPP1R13LQ8WUF5 828 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 ARMC5Q96C12 935 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 TRIM11Q96F44 468 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 RHOXF2Q9BQY4 288 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 OXCT2Q9BYC2 517 aaPredicted RBP7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 CRISPLD2Q9H0B8 497 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 VCX3BQ9H321 246 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 VCX3AQ9NNX9 186 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 RAB20Q9NX57 234 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 AIPL1Q9NZN9 384 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 PUF60Q9UHX1 559 aaKnown RBP7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 CROTQ9UKG9 612 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 NOD1Q9Y239 953 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 DERAQ9Y315 318 aa7.67□□□□□ -1.18
SMARCE1-211ENST00000493660 LRRC53A6NM62 1247 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 GPR182O15218 404 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 ANXA13P27216 316 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 TNFSF9P41273 254 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 SCTRP47872 440 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 CDK7P50613 346 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 NEK2P51955 445 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 RRAGAQ7L523 313 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 LMNTD2Q8IXW0 634 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 THNSL1Q8IYQ7 743 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 CAGE1Q8TC20 777 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 TMEM40Q8WWA1 233 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 DYDC1Q8WWB3 177 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 RSPH1Q8WYR4 309 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 ZNF516Q92618 1163 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 DHX38Q92620 1227 aaKnown RBP7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 ANKRD36BP1Q96IX9 119 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 ZNF333Q96JL9 665 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 NT5C1BQ96P26 610 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 ACAP3Q96P50 834 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 STK33Q9BYT3 514 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 ZCWPW1Q9H0M4 648 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms