RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 ZPBP2Q6X784 338 aa15.47■□□□□ 0.07
PRPF40A-211ENST00000493468 DSTYKQ6XUX3 929 aa15.47■□□□□ 0.07
PRPF40A-211ENST00000493468 ZBTB45Q96K62 511 aaPredicted RBP15.47■□□□□ 0.07
PRPF40A-211ENST00000493468 TSPAN18Q96SJ8 248 aa15.47■□□□□ 0.07
PRPF40A-211ENST00000493468 P2RY13Q9BPV8 354 aa15.47■□□□□ 0.07
PRPF40A-211ENST00000493468 LPIN3Q9BQK8 851 aa15.47■□□□□ 0.07
PRPF40A-211ENST00000493468 NTPCRQ9BSD7 190 aaKnown RBP15.47■□□□□ 0.07
PRPF40A-211ENST00000493468 SMG9Q9H0W8 520 aaKnown RBP15.47■□□□□ 0.07
PRPF40A-211ENST00000493468 EBF3Q9H4W6 596 aa15.47■□□□□ 0.07
PRPF40A-211ENST00000493468 ANKFY1Q9P2R3 1169 aa15.47■□□□□ 0.07
PRPF40A-211ENST00000493468 KIAA1024Q9UPX6 916 aa15.47■□□□□ 0.07
PRPF40A-211ENST00000493468 STK24Q9Y6E0 443 aa15.47■□□□□ 0.07
PRPF40A-211ENST00000493468 PLXND1Q9Y4D7 1925 aa15.47■□□□□ 0.07
PRPF40A-211ENST00000493468 PI4KAP42356 2102 aa15.46■□□□□ 0.07
PRPF40A-211ENST00000493468 DCLK1O15075 740 aa15.46■□□□□ 0.07
PRPF40A-211ENST00000493468 CLTAP09496 248 aa15.46■□□□□ 0.07
PRPF40A-211ENST00000493468 ODC1P11926 461 aa15.46■□□□□ 0.07
PRPF40A-211ENST00000493468 AVPR1AP37288 418 aa15.46■□□□□ 0.07
PRPF40A-211ENST00000493468 STRN3Q13033 797 aa15.46■□□□□ 0.07
PRPF40A-211ENST00000493468 ZNF268Q14587 947 aaPredicted RBP15.46■□□□□ 0.07
PRPF40A-211ENST00000493468 PDGFRLQ15198 375 aa15.46■□□□□ 0.07
PRPF40A-211ENST00000493468 ANKRD1Q15327 319 aa15.46■□□□□ 0.07
PRPF40A-211ENST00000493468 TRIM68Q6AZZ1 485 aa15.46■□□□□ 0.07
PRPF40A-211ENST00000493468 RPLP0P6Q8NHW5 317 aa15.46■□□□□ 0.07
PRPF40A-211ENST00000493468 C2orf15Q8WU43 125 aaKnown RBP15.46■□□□□ 0.07
PRPF40A-211ENST00000493468 USP13Q92995 863 aaPredicted RBP15.46■□□□□ 0.07
PRPF40A-211ENST00000493468 GTF3C6Q969F1 213 aa15.46■□□□□ 0.07
PRPF40A-211ENST00000493468 KIF12Q96FN5 646 aa15.46■□□□□ 0.07
PRPF40A-211ENST00000493468 TIPINQ9BVW5 301 aa15.46■□□□□ 0.07
PRPF40A-211ENST00000493468 FBRSL1Q9HCM7 1045 aaKnown RBP15.46■□□□□ 0.07
PRPF40A-211ENST00000493468 DDX19AQ9NUU7 478 aaKnown RBP15.46■□□□□ 0.07
PRPF40A-211ENST00000493468 POLR3BQ9NW08 1133 aaPredicted RBP15.46■□□□□ 0.07
PRPF40A-211ENST00000493468 EVLQ9UI08 416 aaPredicted RBP15.46■□□□□ 0.07
PRPF40A-211ENST00000493468 KCNG1Q9UIX4 513 aa15.46■□□□□ 0.07
PRPF40A-211ENST00000493468 TCHHQ07283 1943 aa15.46■□□□□ 0.07
PRPF40A-211ENST00000493468 FREM2Q5SZK8 3169 aa15.45■□□□□ 0.06
PRPF40A-211ENST00000493468 CLDN3O15551 220 aa15.45■□□□□ 0.06
PRPF40A-211ENST00000493468 CYP11A1P05108 521 aa15.45■□□□□ 0.06
PRPF40A-211ENST00000493468 GBP1P32455 592 aa15.45■□□□□ 0.06
PRPF40A-211ENST00000493468 GALK1P51570 392 aa15.45■□□□□ 0.06
PRPF40A-211ENST00000493468 LILRA4P59901 499 aa15.45■□□□□ 0.06
PRPF40A-211ENST00000493468 SMARCB1Q12824 385 aa15.45■□□□□ 0.06
PRPF40A-211ENST00000493468 BFSP1Q12934 665 aa15.45■□□□□ 0.06
PRPF40A-211ENST00000493468 SEZ6Q53EL9 994 aa15.45■□□□□ 0.06
PRPF40A-211ENST00000493468 CYP2U1Q7Z449 544 aa15.45■□□□□ 0.06
PRPF40A-211ENST00000493468 NSUN7Q8NE18 718 aaKnown RBP15.45■□□□□ 0.06
PRPF40A-211ENST00000493468 OR10T2Q8NGX3 314 aa15.45■□□□□ 0.06
PRPF40A-211ENST00000493468 CCDC26Q8TAB7 109 aa15.45■□□□□ 0.06
PRPF40A-211ENST00000493468 SPIRE2Q8WWL2 714 aa15.45■□□□□ 0.06
PRPF40A-211ENST00000493468 SEPT5Q99719 369 aaPredicted RBP15.45■□□□□ 0.06
PRPF40A-211ENST00000493468 ZCWPW1Q9H0M4 648 aa15.45■□□□□ 0.06
PRPF40A-211ENST00000493468 TDP1Q9NUW8 608 aa15.45■□□□□ 0.06
PRPF40A-211ENST00000493468 CCL26Q9Y258 94 aa15.45■□□□□ 0.06
PRPF40A-211ENST00000493468 MSRB2Q9Y3D2 182 aa15.45■□□□□ 0.06
PRPF40A-211ENST00000493468 SCN1AP35498 2009 aa15.44■□□□□ 0.06
PRPF40A-211ENST00000493468 CACNA1EQ15878 2313 aa15.44■□□□□ 0.06
PRPF40A-211ENST00000493468 TAF4O00268 1085 aa15.44■□□□□ 0.06
PRPF40A-211ENST00000493468 SLC16A4O15374 487 aa15.44■□□□□ 0.06
PRPF40A-211ENST00000493468 ARSAP15289 507 aa15.44■□□□□ 0.06
PRPF40A-211ENST00000493468 GJA4P35212 333 aa15.44■□□□□ 0.06
PRPF40A-211ENST00000493468 PPP2R3AQ06190 1150 aa15.44■□□□□ 0.06
PRPF40A-211ENST00000493468 PDIA5Q14554 519 aa15.44■□□□□ 0.06
PRPF40A-211ENST00000493468 KYAT1Q16773 422 aa15.44■□□□□ 0.06
PRPF40A-211ENST00000493468 MGAT5BQ3V5L5 792 aa15.44■□□□□ 0.06
PRPF40A-211ENST00000493468 USP39Q53GS9 565 aaKnown RBP15.44■□□□□ 0.06
PRPF40A-211ENST00000493468 CC2D1AQ6P1N0 951 aaPredicted RBP15.44■□□□□ 0.06
PRPF40A-211ENST00000493468 C1orf186Q6ZWK4 172 aa15.44■□□□□ 0.06
PRPF40A-211ENST00000493468 TMEM150AQ86TG1 271 aa15.44■□□□□ 0.06
PRPF40A-211ENST00000493468 RASSF3Q86WH2 238 aa15.44■□□□□ 0.06
PRPF40A-211ENST00000493468 TMEM130Q8N3G9 435 aa15.44■□□□□ 0.06
PRPF40A-211ENST00000493468 CPA6Q8N4T0 437 aa15.44■□□□□ 0.06
PRPF40A-211ENST00000493468 TMEM161BQ8NDZ6 487 aa15.44■□□□□ 0.06
PRPF40A-211ENST00000493468 SPPL2BQ8TCT7 592 aa15.44■□□□□ 0.06
PRPF40A-211ENST00000493468 EZH1Q92800 747 aaPredicted RBP15.44■□□□□ 0.06
PRPF40A-211ENST00000493468 KCNN1Q92952 543 aa15.44■□□□□ 0.06
PRPF40A-211ENST00000493468 SENP8Q96LD8 212 aa15.44■□□□□ 0.06
PRPF40A-211ENST00000493468 RUSC1Q9BVN2 902 aa15.44■□□□□ 0.06
PRPF40A-211ENST00000493468 LRWD1Q9UFC0 647 aa15.44■□□□□ 0.06
PRPF40A-211ENST00000493468 DNM3Q9UQ16 869 aa15.44■□□□□ 0.06
PRPF40A-211ENST00000493468 HELZP42694 1942 aaKnown RBP15.44■□□□□ 0.06
PRPF40A-211ENST00000493468 ADAMTS20P59510 1910 aa15.44■□□□□ 0.06
PRPF40A-211ENST00000493468 LAMA5O15230 3695 aa15.43■□□□□ 0.06
PRPF40A-211ENST00000493468 F11P03951 625 aa15.43■□□□□ 0.06
PRPF40A-211ENST00000493468 ADRB2P07550 413 aa15.43■□□□□ 0.06
PRPF40A-211ENST00000493468 MAPTP10636 758 aaKnown RBP15.43■□□□□ 0.06
PRPF40A-211ENST00000493468 GUCY2CP25092 1073 aa15.43■□□□□ 0.06
PRPF40A-211ENST00000493468 DGKEP52429 567 aa15.43■□□□□ 0.06
PRPF40A-211ENST00000493468 NLRP12P59046 1061 aa15.43■□□□□ 0.06
PRPF40A-211ENST00000493468 SPAG1Q07617 926 aa15.43■□□□□ 0.06
PRPF40A-211ENST00000493468 LMAN2Q12907 356 aa15.43■□□□□ 0.06
PRPF40A-211ENST00000493468 SAFBQ15424 915 aaKnown RBP eCLIP15.43■□□□□ 0.06
PRPF40A-211ENST00000493468 ZNF174Q15697 407 aa15.43■□□□□ 0.06
PRPF40A-211ENST00000493468 TAF12Q16514 161 aa15.43■□□□□ 0.06
PRPF40A-211ENST00000493468 SLC39A12Q504Y0 691 aa15.43■□□□□ 0.06
PRPF40A-211ENST00000493468 SPATA1Q5VX52 437 aa15.43■□□□□ 0.06
PRPF40A-211ENST00000493468 RINT1Q6NUQ1 792 aa15.43■□□□□ 0.06
PRPF40A-211ENST00000493468 MAB21L3Q8N8X9 362 aa15.43■□□□□ 0.06
PRPF40A-211ENST00000493468 IGSF22Q8N9C0 903 aa15.43■□□□□ 0.06
PRPF40A-211ENST00000493468 DEFB124Q8NES8 71 aa15.43■□□□□ 0.06
PRPF40A-211ENST00000493468 TSTD1Q8NFU3 115 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms