RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 DPH1Q9BZG8 443 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 GSTO2Q9H4Y5 243 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 SPON1Q9HCB6 807 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 STK32BQ9NY57 414 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 CHST2Q9Y4C5 530 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 PIPSLA2A3N6 862 aa3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 CFAP69A5D8W1 941 aa3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 PHGDHO43175 533 aaKnown RBP3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 DNAJB5O75953 348 aa3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 AGFG2O95081 481 aa3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 ESRRBO95718 433 aa3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 GJB1P08034 283 aa3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 GCSHP23434 173 aa3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 SMARCA1P28370 1054 aa3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 BMPR1AP36894 532 aa3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 PLA2G5P39877 138 aa3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 PIK3CBP42338 1070 aa3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 TM4SF4P48230 202 aa3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 CACNB3P54284 484 aa3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 SOX8P57073 446 aa3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 FAM189BP81408 668 aa3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 CREMQ03060 361 aa3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 POLD3Q15054 466 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 KHDC1LQ5JSQ8 128 aa3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 UTP14CQ5TAP6 766 aaKnown RBP3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 AGAP9Q5VTM2 703 aa3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 EFCAB12Q6NXP0 572 aa3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 DARS2Q6PI48 645 aaKnown RBP3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 MED25Q71SY5 747 aa3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 ZFP28Q8NHY6 868 aa3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 FBXO41Q8TF61 875 aa3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 TNPO1Q92973 898 aaKnown RBP3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 MTFMTQ96DP5 389 aaKnown RBP3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 APIPQ96GX9 242 aa3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 C1QTNF7Q9BXJ2 289 aa3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 TLR10Q9BXR5 811 aa3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 PACSIN1Q9BY11 444 aa3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 ZNF700Q9H0M5 742 aa3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 SMURF2Q9HAU4 748 aa3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 GPR35Q9HC97 309 aa3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 FNIP2Q9P278 1114 aa3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 CPA4Q9UI42 421 aa3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 ZDHHC8Q9ULC8 765 aa3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 MED16Q9Y2X0 877 aa3.64□□□□□ -1.83
HMGB1P30-201ENST00000492455 PQBP1O60828 265 aaKnown RBP3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 RBMXL2O75526 392 aaKnown RBP3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 SPATA31D3P0C874 917 aa3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 CBSLP0DN79 551 aa3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 RARBP10826 455 aa3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 FCER1AP12319 257 aa3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 EN2P19622 333 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 SERPINB3P29508 390 aa3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 CBSP35520 551 aa3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 TOB1P50616 345 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 ALDH5A1P51649 535 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 RHBDL3P58872 404 aa3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 NHLH2Q02577 135 aa3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 SRSF4Q08170 494 aaKnown RBP3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 TCF15Q12870 199 aa3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 SPATA31D4Q6ZUB0 917 aa3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 PPP1R32Q7Z5V6 425 aa3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 SESTD1Q86VW0 696 aa3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 ARHGEF25Q86VW2 580 aa3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 PDSS2Q86YH6 399 aa3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 CCAR1Q8IX12 1150 aaKnown RBP3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 NLGN4YQ8NFZ3 816 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 BRIX1Q8TDN6 353 aaKnown RBP3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 KBTBD7Q8WVZ9 684 aa3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 LRIG1Q96JA1 1093 aa3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 STRBPQ96SI9 672 aaKnown RBP3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 SLAMF7Q9NQ25 335 aa3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 KLHL11Q9NVR0 708 aa3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 RLIMQ9NVW2 624 aa3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 RNF181Q9P0P0 153 aa3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 HSFX1Q9UBD0 423 aa3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 CPNE7Q9UBL6 633 aa3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 USP25Q9UHP3 1055 aa3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 PHTF1Q9UMS5 762 aa3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 CLCA2Q9UQC9 943 aa3.63□□□□□ -1.83
HMGB1P30-201ENST00000492455 A0A1W2PPL8 197 aa3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 ZNF785A8K8V0 405 aa3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 DIRC3C9JPN6 131 aa3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 F8W8V4 182 aa3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 ELANEP08246 267 aa3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 MYL3P08590 195 aa3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 ALAS1P13196 640 aa3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 FDXRP22570 491 aa3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 DDX6P26196 483 aaKnown RBP eCLIP3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 SLC7A1P30825 629 aa3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 PRIM2P49643 509 aa3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 PSMC1P62191 440 aaKnown RBP3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 FMO1Q01740 532 aa3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 BOP1Q14137 746 aaKnown RBP3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 ATP2B3Q16720 1220 aa3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 BEAN1Q3B7T3 259 aa3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 PDCD4Q53EL6 469 aaKnown RBP3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 C1QL2Q7Z5L3 287 aa3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 MICU3Q86XE3 530 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms