RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 KCNU1A8MYU2 1149 aa5.32□□□□□ -1.56
PHC3-213ENST00000491258 QSOX1O00391 747 aa5.32□□□□□ -1.56
PHC3-213ENST00000491258 TOP3BO95985 862 aaKnown RBP5.32□□□□□ -1.56
PHC3-213ENST00000491258 PDHA1P08559 390 aa5.32□□□□□ -1.56
PHC3-213ENST00000491258 ALDH9A1P49189 494 aa5.32□□□□□ -1.56
PHC3-213ENST00000491258 AARS2Q5JTZ9 985 aaKnown RBP5.32□□□□□ -1.56
PHC3-213ENST00000491258 TEDDM1Q5T9Z0 273 aa5.32□□□□□ -1.56
PHC3-213ENST00000491258 AWAT2Q6E213 333 aa5.32□□□□□ -1.56
PHC3-213ENST00000491258 ZNF804AQ7Z570 1209 aa5.32□□□□□ -1.56
PHC3-213ENST00000491258 NOP9Q86U38 636 aaKnown RBP5.32□□□□□ -1.56
PHC3-213ENST00000491258 PDSS2Q86YH6 399 aa5.32□□□□□ -1.56
PHC3-213ENST00000491258 CNGA4Q8IV77 575 aa5.32□□□□□ -1.56
PHC3-213ENST00000491258 VRK1Q99986 396 aaPredicted RBP5.32□□□□□ -1.56
PHC3-213ENST00000491258 CNPPD1Q9BV87 410 aa5.32□□□□□ -1.56
PHC3-213ENST00000491258 SLAMF7Q9NQ25 335 aa5.32□□□□□ -1.56
PHC3-213ENST00000491258 MAN1C1Q9NR34 630 aa5.32□□□□□ -1.56
PHC3-213ENST00000491258 MKS1Q9NXB0 559 aa5.32□□□□□ -1.56
PHC3-213ENST00000491258 IPPQ9Y573 584 aa5.32□□□□□ -1.56
PHC3-213ENST00000491258 CCDC180Q9P1Z9 1646 aa5.31□□□□□ -1.56
PHC3-213ENST00000491258 PRRT4C9JH25 899 aa5.31□□□□□ -1.56
PHC3-213ENST00000491258 H0YIZ8 118 aa5.31□□□□□ -1.56
PHC3-213ENST00000491258 F2RL2O00254 374 aa5.31□□□□□ -1.56
PHC3-213ENST00000491258 ZNF213O14771 459 aa5.31□□□□□ -1.56
PHC3-213ENST00000491258 PPM1DO15297 605 aa5.31□□□□□ -1.56
PHC3-213ENST00000491258 SOAT2O75908 522 aa5.31□□□□□ -1.56
PHC3-213ENST00000491258 DNAJB5O75953 348 aa5.31□□□□□ -1.56
PHC3-213ENST00000491258 GJB1P08034 283 aa5.31□□□□□ -1.56
PHC3-213ENST00000491258 ARHGAP25P42331 645 aa5.31□□□□□ -1.56
PHC3-213ENST00000491258 POLGP54098 1239 aaPredicted RBP5.31□□□□□ -1.56
PHC3-213ENST00000491258 FOXG1P55316 489 aaPredicted RBP5.31□□□□□ -1.56
PHC3-213ENST00000491258 KLHL22Q53GT1 634 aa5.31□□□□□ -1.56
PHC3-213ENST00000491258 ZNF618Q5T7W0 954 aa5.31□□□□□ -1.56
PHC3-213ENST00000491258 VPS53Q5VIR6 699 aa5.31□□□□□ -1.56
PHC3-213ENST00000491258 ANKRD16Q6P6B7 361 aa5.31□□□□□ -1.56
PHC3-213ENST00000491258 SLC4A10Q6U841 1118 aa5.31□□□□□ -1.56
PHC3-213ENST00000491258 CRELD2Q6UXH1 353 aaPredicted RBP5.31□□□□□ -1.56
PHC3-213ENST00000491258 ZNF517Q6ZMY9 492 aaPredicted RBP5.31□□□□□ -1.56
PHC3-213ENST00000491258 DMRTA2Q96SC8 542 aa5.31□□□□□ -1.56
PHC3-213ENST00000491258 VPS16Q9H269 839 aa5.31□□□□□ -1.56
PHC3-213ENST00000491258 SERHLQ9NQF3 203 aa5.31□□□□□ -1.56
PHC3-213ENST00000491258 CFAP97Q9P2B7 532 aa5.31□□□□□ -1.56
PHC3-213ENST00000491258 KIF20AO95235 890 aa5.3□□□□□ -1.56
PHC3-213ENST00000491258 CHEK2O96017 543 aa5.3□□□□□ -1.56
PHC3-213ENST00000491258 CBSLP0DN79 551 aa5.3□□□□□ -1.56
PHC3-213ENST00000491258 MALP21145 153 aa5.3□□□□□ -1.56
PHC3-213ENST00000491258 SFPQP23246 707 aaKnown RBP eCLIP5.3□□□□□ -1.56
PHC3-213ENST00000491258 EDNRBP24530 442 aa5.3□□□□□ -1.56
PHC3-213ENST00000491258 CYP2C18P33260 490 aa5.3□□□□□ -1.56
PHC3-213ENST00000491258 CBSP35520 551 aa5.3□□□□□ -1.56
PHC3-213ENST00000491258 IARSP41252 1262 aaKnown RBP5.3□□□□□ -1.56
PHC3-213ENST00000491258 PLCD1P51178 756 aa5.3□□□□□ -1.56
PHC3-213ENST00000491258 EEFSECP57772 596 aaKnown RBP5.3□□□□□ -1.56
PHC3-213ENST00000491258 KIF23Q02241 960 aaPredicted RBP5.3□□□□□ -1.56
PHC3-213ENST00000491258 HABP2Q14520 560 aaPredicted RBP5.3□□□□□ -1.56
PHC3-213ENST00000491258 RABEP1Q15276 862 aa5.3□□□□□ -1.56
PHC3-213ENST00000491258 ZNF260Q3ZCT1 412 aa5.3□□□□□ -1.56
PHC3-213ENST00000491258 KHDC1Q4VXA5 237 aaKnown RBP5.3□□□□□ -1.56
PHC3-213ENST00000491258 PCID2Q5JVF3 399 aa5.3□□□□□ -1.56
PHC3-213ENST00000491258 CAMKK2Q96RR4 588 aa5.3□□□□□ -1.56
PHC3-213ENST00000491258 GNL3LQ9NVN8 582 aaKnown RBP5.3□□□□□ -1.56
PHC3-213ENST00000491258 AGAP1Q9UPQ3 857 aa5.3□□□□□ -1.56
PHC3-213ENST00000491258 RAD54BQ9Y620 910 aa5.3□□□□□ -1.56
PHC3-213ENST00000491258 SMIM35A0A1B0GVV1 85 aa5.29□□□□□ -1.56
PHC3-213ENST00000491258 XPOTO43592 962 aaKnown RBP5.29□□□□□ -1.56
PHC3-213ENST00000491258 MT-CO1P00395 513 aa5.29□□□□□ -1.56
PHC3-213ENST00000491258 RPLP2P05387 115 aaKnown RBP5.29□□□□□ -1.56
PHC3-213ENST00000491258 SMARCA1P28370 1054 aa5.29□□□□□ -1.56
PHC3-213ENST00000491258 TKTP29401 623 aaKnown RBP5.29□□□□□ -1.56
PHC3-213ENST00000491258 CYP2C19P33261 490 aa5.29□□□□□ -1.56
PHC3-213ENST00000491258 PHKA1P46020 1223 aa5.29□□□□□ -1.56
PHC3-213ENST00000491258 SNAPC2Q13487 334 aa5.29□□□□□ -1.56
PHC3-213ENST00000491258 PXDC1Q5TGL8 231 aa5.29□□□□□ -1.56
PHC3-213ENST00000491258 RUSC1-AS1Q66K80 236 aa5.29□□□□□ -1.56
PHC3-213ENST00000491258 NAPRTQ6XQN6 538 aa5.29□□□□□ -1.56
PHC3-213ENST00000491258 KRT26Q7Z3Y9 468 aa5.29□□□□□ -1.56
PHC3-213ENST00000491258 FAM109AQ8N4B1 249 aa5.29□□□□□ -1.56
PHC3-213ENST00000491258 CNTD1Q8N815 330 aa5.29□□□□□ -1.56
PHC3-213ENST00000491258 PNLDC1Q8NA58 520 aaKnown RBP5.29□□□□□ -1.56
PHC3-213ENST00000491258 HMCESQ96FZ2 354 aa5.29□□□□□ -1.56
PHC3-213ENST00000491258 PRSS22Q9GZN4 317 aa5.29□□□□□ -1.56
PHC3-213ENST00000491258 RLIMQ9NVW2 624 aa5.29□□□□□ -1.56
PHC3-213ENST00000491258 SIDT1Q9NXL6 827 aaKnown RBP5.29□□□□□ -1.56
PHC3-213ENST00000491258 TUBA8Q9NY65 449 aaPredicted RBP5.29□□□□□ -1.56
PHC3-213ENST00000491258 DLL3Q9NYJ7 618 aa5.29□□□□□ -1.56
PHC3-213ENST00000491258 CNTNAP2Q9UHC6 1331 aa5.28□□□□□ -1.56
PHC3-213ENST00000491258 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.28□□□□□ -1.56
PHC3-213ENST00000491258 MYO1FO00160 1098 aa5.28□□□□□ -1.56
PHC3-213ENST00000491258 SNHG28P0DPA3 235 aa5.28□□□□□ -1.56
PHC3-213ENST00000491258 ENGP17813 658 aa5.28□□□□□ -1.56
PHC3-213ENST00000491258 NR4A2P43354 598 aa5.28□□□□□ -1.56
PHC3-213ENST00000491258 GCLCP48506 637 aaPredicted RBP5.28□□□□□ -1.56
PHC3-213ENST00000491258 CLCN2P51788 898 aa5.28□□□□□ -1.56
PHC3-213ENST00000491258 CATSPERGQ6ZRH7 1159 aa5.28□□□□□ -1.56
PHC3-213ENST00000491258 C1orf162Q8NEQ5 155 aaPredicted RBP5.28□□□□□ -1.56
PHC3-213ENST00000491258 NSUN6Q8TEA1 469 aaKnown RBP5.28□□□□□ -1.56
PHC3-213ENST00000491258 C5orf34Q96MH7 638 aa5.28□□□□□ -1.56
PHC3-213ENST00000491258 SIK2Q9H0K1 926 aa5.28□□□□□ -1.56
PHC3-213ENST00000491258 GPR35Q9HC97 309 aa5.28□□□□□ -1.56
PHC3-213ENST00000491258 PDGFCQ9NRA1 345 aa5.28□□□□□ -1.56
PHC3-213ENST00000491258 KLHL33A6NCF5 533 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms