RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 GIT1Q9Y2X7 761 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 NR2E1Q9Y466 385 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 LGALS16A8MUM7 142 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 C2CD4DB7Z1M9 353 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 TISP43B9A030 160 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 F8W810 466 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 H0YCG3 227 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 N4BP3O15049 544 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 INPPL1O15357 1258 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 AKAP3O75969 853 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 GNA14O95837 355 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 SOD2P04179 222 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 PTMAP06454 111 aaKnown RBP8.18□□□□□ -1.1
CLDN1-202ENST00000490800 TPM3P06753 285 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 RPL13P26373 211 aaKnown RBP8.18□□□□□ -1.1
CLDN1-202ENST00000490800 PTGIRP43119 386 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 CASP4P49662 377 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 CLCN4P51793 760 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 MARSP56192 900 aaKnown RBP8.18□□□□□ -1.1
CLDN1-202ENST00000490800 SNRPFP62306 86 aaKnown RBP8.18□□□□□ -1.1
CLDN1-202ENST00000490800 DSC1Q08554 894 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 SIGLEC14Q08ET2 396 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 CLN3Q13286 438 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 MYBPC2Q14324 1141 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 MIIPQ5JXC2 388 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 KIAA0319Q5VV43 1072 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 SLC39A4Q6P5W5 647 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 SLC27A1Q6PCB7 646 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 TMC6Q7Z403 805 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 SLC9A9Q8IVB4 645 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 C12orf56Q8IXR9 622 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 HACE1Q8IYU2 909 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 KREMEN2Q8NCW0 462 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 DEPTORQ8TB45 409 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 TMEM174Q8WUU8 243 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 RABGGTAQ92696 567 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 RIPOR3Q96MK2 946 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 COLEC11Q9BWP8 271 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 FZD8Q9H461 694 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 DZANK1Q9NVP4 752 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 CGNQ9P2M7 1197 aaKnown RBP8.18□□□□□ -1.1
CLDN1-202ENST00000490800 STK39Q9UEW8 545 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 EXOC7Q9UPT5 735 aa8.18□□□□□ -1.1
CLDN1-202ENST00000490800 FAM187AA6NFU0 413 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 GOLGA6L6A8MZA4 724 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 ANKRD63C9JTQ0 380 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 SLC16A3O15427 465 aaKnown RBP8.17□□□□□ -1.1
CLDN1-202ENST00000490800 TEX28O15482 410 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 EFEMP2O95967 443 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 URODP06132 367 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 SPATA31D3P0C874 917 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 SCP2P22307 547 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 ABCD1P33897 745 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 SERPINB4P48594 390 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 CYP2J2P51589 502 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 EPHA4P54764 986 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 TBX2Q13207 712 aaPredicted RBP8.17□□□□□ -1.1
CLDN1-202ENST00000490800 MAN2A1Q16706 1144 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 CCDC40Q4G0X9 1142 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 VWA3BQ502W6 1294 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 HS1BP3Q53T59 392 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 TMCO4Q5TGY1 634 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 CDCA2Q69YH5 1023 aaPredicted RBP8.17□□□□□ -1.1
CLDN1-202ENST00000490800 KIAA1841Q6NSI8 718 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 SPATA31D4Q6ZUB0 917 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 CCDC186Q7Z3E2 898 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 FRMD5Q7Z6J6 570 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 GPR149Q86SP6 731 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 ALYREFQ86V81 257 aaKnown RBP8.17□□□□□ -1.1
CLDN1-202ENST00000490800 TRIM59Q8IWR1 403 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 ZBTB8OSQ8IWT0 167 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 FBXL6Q8N531 539 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 MEIOBQ8N635 442 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 ASIC4Q96FT7 647 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 BORCS6Q96GS4 357 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 B3GALT6Q96L58 329 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 RPS6KC1Q96S38 1066 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 CBWD1Q9BRT8 395 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 HERC2P3Q9BVR0 1158 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 GPR62Q9BZJ7 368 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 CCDC113Q9H0I3 377 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 KCNH6Q9H252 994 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 PRMT7Q9NVM4 692 aaPredicted RBP8.17□□□□□ -1.1
CLDN1-202ENST00000490800 SNTG2Q9NY99 539 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 IMPACTQ9P2X3 320 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 SSX2IPQ9Y2D8 614 aa8.17□□□□□ -1.1
CLDN1-202ENST00000490800 CCDC195A0A1B0GUA6 201 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 A6NJY4 79 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 K7ERI5 159 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 ACKR2O00590 384 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 CAPN5O15484 640 aaPredicted RBP8.16□□□□□ -1.1
CLDN1-202ENST00000490800 TECTAO75443 2155 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 TADA2AO75478 443 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 PDGFBP01127 241 aaPredicted RBP8.16□□□□□ -1.1
CLDN1-202ENST00000490800 PIGRP01833 764 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 EDN1P05305 212 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 PRKCBP05771 671 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 ASGR2P07307 311 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 TPM2P07951 284 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 EPB41P11171 864 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms