RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 EPB41L4AQ9HCS5 686 aaPredicted RBP5.89□□□□□ -1.47
SSX2IP-208ENST00000490476 PTPRHQ9HD43 1115 aa5.89□□□□□ -1.47
SSX2IP-208ENST00000490476 PLCB1Q9NQ66 1216 aa5.89□□□□□ -1.47
SSX2IP-208ENST00000490476 TMEM140Q9NV12 185 aa5.89□□□□□ -1.47
SSX2IP-208ENST00000490476 PNPOQ9NVS9 261 aa5.89□□□□□ -1.47
SSX2IP-208ENST00000490476 NTMQ9P121 344 aa5.89□□□□□ -1.47
SSX2IP-208ENST00000490476 FEZ2Q9UHY8 353 aaPredicted RBP5.89□□□□□ -1.47
SSX2IP-208ENST00000490476 PCDHA6Q9UN73 950 aa5.89□□□□□ -1.47
SSX2IP-208ENST00000490476 SLX4Q8IY92 1834 aa5.89□□□□□ -1.47
SSX2IP-208ENST00000490476 TJP1Q07157 1748 aa5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 ZNF646O15015 1829 aaPredicted RBP5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 IFRD1O00458 451 aaPredicted RBP5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 TYRP14679 529 aa5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 ZKSCAN1P17029 563 aaPredicted RBP5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 FPR1P21462 350 aa5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 PCSK1P29120 753 aa5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 SLC7A1P30825 629 aa5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 CASRP41180 1078 aa5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 PRIM2P49643 509 aa5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 WNT3AP56704 352 aa5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 NKX6-1P78426 367 aaPredicted RBP5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 NHLH1Q02575 133 aa5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 TLE1Q04724 770 aa5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 CHAF1AQ13111 956 aaPredicted RBP5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 USP10Q14694 798 aaKnown RBP5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 GRAMD1BQ3KR37 738 aa5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 FLYWCH1Q4VC44 716 aa5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 TMEM31Q5JXX7 168 aa5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 TOGARAM2Q6ZUX3 1019 aa5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 TRMT2AQ8IZ69 625 aaKnown RBP5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 ANKRD53Q8N9V6 530 aa5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 OR5M3Q8NGP4 307 aa5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 SLC7A6OSQ96CW6 309 aaPredicted RBP5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 YTHDC1Q96MU7 727 aaKnown RBP5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 CDC5LQ99459 802 aaKnown RBP5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 HTATIP2Q9BUP3 242 aa5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 LRRC27Q9C0I9 530 aa5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 OR10A2Q9H208 303 aa5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 BARX1Q9HBU1 254 aaPredicted RBP5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 CNOT6Q9ULM6 557 aaKnown RBP5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 TRIM17Q9Y577 477 aa5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 CTDP1Q9Y5B0 961 aaPredicted RBP5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 ACTL7AQ9Y615 435 aa5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 RPGRIP1LQ68CZ1 1315 aa5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 DCHS1Q96JQ0 3298 aa5.88□□□□□ -1.47
SSX2IP-208ENST00000490476 PHGDHO43175 533 aaKnown RBP5.87□□□□□ -1.47
SSX2IP-208ENST00000490476 ARIH2O95376 493 aa5.87□□□□□ -1.47
SSX2IP-208ENST00000490476 FOSP01100 380 aaPredicted RBP5.87□□□□□ -1.47
SSX2IP-208ENST00000490476 MYF5P13349 255 aa5.87□□□□□ -1.47
SSX2IP-208ENST00000490476 GYPEP15421 78 aa5.87□□□□□ -1.47
SSX2IP-208ENST00000490476 CSF2RBP32927 897 aa5.87□□□□□ -1.47
SSX2IP-208ENST00000490476 CRHR1P34998 444 aa5.87□□□□□ -1.47
SSX2IP-208ENST00000490476 SARSP49591 514 aaKnown RBP5.87□□□□□ -1.47
SSX2IP-208ENST00000490476 DDR1Q08345 913 aa5.87□□□□□ -1.47
SSX2IP-208ENST00000490476 STK3Q13188 491 aa5.87□□□□□ -1.47
SSX2IP-208ENST00000490476 DHX8Q14562 1220 aaKnown RBP5.87□□□□□ -1.47
SSX2IP-208ENST00000490476 SLC4A8Q2Y0W8 1093 aa5.87□□□□□ -1.47
SSX2IP-208ENST00000490476 KHDC1LQ5JSQ8 128 aa5.87□□□□□ -1.47
SSX2IP-208ENST00000490476 PRAMEF14Q5SWL7 426 aa5.87□□□□□ -1.47
SSX2IP-208ENST00000490476 AGBL4Q5VU57 503 aa5.87□□□□□ -1.47
SSX2IP-208ENST00000490476 FAM109BQ6ICB4 259 aaPredicted RBP5.87□□□□□ -1.47
SSX2IP-208ENST00000490476 ATG14Q6ZNE5 492 aa5.87□□□□□ -1.47
SSX2IP-208ENST00000490476 REXO1L1PQ8IX06 675 aa5.87□□□□□ -1.47
SSX2IP-208ENST00000490476 LILRA3Q8N6C8 439 aaPredicted RBP5.87□□□□□ -1.47
SSX2IP-208ENST00000490476 ENAHQ8N8S7 591 aaPredicted RBP5.87□□□□□ -1.47
SSX2IP-208ENST00000490476 PGBD4Q96DM1 585 aa5.87□□□□□ -1.47
SSX2IP-208ENST00000490476 AJUBAQ96IF1 538 aa5.87□□□□□ -1.47
SSX2IP-208ENST00000490476 KATNBL1Q9H079 304 aa5.87□□□□□ -1.47
SSX2IP-208ENST00000490476 RSAD1Q9HA92 442 aa5.87□□□□□ -1.47
SSX2IP-208ENST00000490476 KIAA1586Q9HCI6 787 aa5.87□□□□□ -1.47
SSX2IP-208ENST00000490476 SARS2Q9NP81 518 aaKnown RBP5.87□□□□□ -1.47
SSX2IP-208ENST00000490476 SLAMF7Q9NQ25 335 aa5.87□□□□□ -1.47
SSX2IP-208ENST00000490476 CNNM1Q9NRU3 951 aa5.87□□□□□ -1.47
SSX2IP-208ENST00000490476 CALCOCO1Q9P1Z2 691 aa5.87□□□□□ -1.47
SSX2IP-208ENST00000490476 OGDHLQ9ULD0 1010 aa5.87□□□□□ -1.47
SSX2IP-208ENST00000490476 KCTD3Q9Y597 815 aa5.87□□□□□ -1.47
SSX2IP-208ENST00000490476 SMG6Q86US8 1419 aaKnown RBP5.87□□□□□ -1.47
SSX2IP-208ENST00000490476 VPS8Q8N3P4 1428 aa5.87□□□□□ -1.47
SSX2IP-208ENST00000490476 MYH14Q7Z406 1995 aaKnown RBP5.87□□□□□ -1.47
SSX2IP-208ENST00000490476 ASH1LQ9NR48 2969 aaKnown RBP5.86□□□□□ -1.47
SSX2IP-208ENST00000490476 F5H423 210 aaPredicted RBP5.86□□□□□ -1.47
SSX2IP-208ENST00000490476 WNT10BO00744 389 aa5.86□□□□□ -1.47
SSX2IP-208ENST00000490476 CREB3O43889 395 aa5.86□□□□□ -1.47
SSX2IP-208ENST00000490476 GASTP01350 101 aa5.86□□□□□ -1.47
SSX2IP-208ENST00000490476 SETSIPP0DME0 302 aa5.86□□□□□ -1.47
SSX2IP-208ENST00000490476 RAP2AP10114 183 aa5.86□□□□□ -1.47
SSX2IP-208ENST00000490476 BRAFP15056 766 aa5.86□□□□□ -1.47
SSX2IP-208ENST00000490476 ITGB8P26012 769 aa5.86□□□□□ -1.47
SSX2IP-208ENST00000490476 TRAPPC10P48553 1259 aa5.86□□□□□ -1.47
SSX2IP-208ENST00000490476 DLX2Q07687 328 aaPredicted RBP5.86□□□□□ -1.47
SSX2IP-208ENST00000490476 TBR1Q16650 682 aa5.86□□□□□ -1.47
SSX2IP-208ENST00000490476 USP30Q70CQ3 517 aa5.86□□□□□ -1.47
SSX2IP-208ENST00000490476 PPP1R3BQ86XI6 285 aa5.86□□□□□ -1.47
SSX2IP-208ENST00000490476 LIX1LQ8IVB5 337 aa5.86□□□□□ -1.47
SSX2IP-208ENST00000490476 KRT78Q8N1N4 520 aa5.86□□□□□ -1.47
SSX2IP-208ENST00000490476 TXNDC5Q8NBS9 432 aaKnown RBP5.86□□□□□ -1.47
SSX2IP-208ENST00000490476 IL31RAQ8NI17 732 aa5.86□□□□□ -1.47
SSX2IP-208ENST00000490476 TNPO1Q92973 898 aaKnown RBP5.86□□□□□ -1.47
SSX2IP-208ENST00000490476 APIPQ96GX9 242 aa5.86□□□□□ -1.47
SSX2IP-208ENST00000490476 ZNF333Q96JL9 665 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms