RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 ZFYP08048 801 aaPredicted RBP3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 RHOXF2BP0C7M4 288 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 GOLGA6DP0CG33 693 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 SRGNP10124 158 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 MYBL2P10244 700 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 FGFR1P11362 822 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 SLC5A1P13866 664 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 PFKLP17858 780 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 LMO1P25800 156 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 ELF1P32519 619 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 ECI1P42126 302 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 CCT5P48643 541 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 FXR1P51114 621 aaKnown RBP eCLIP3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 HERVK_113P62684 666 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 CDK17Q00537 523 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 PURAQ00577 322 aaKnown RBP3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 ACTN3Q08043 901 aaPredicted RBP3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 PICALMQ13492 652 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 CRYMQ14894 314 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 SLC9C2Q5TAH2 1124 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 LRCH2Q5VUJ6 765 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 PRAMEF18Q5VWM3 479 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 IQCEQ6IPM2 695 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 TLDC1Q6P9B6 456 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 EMBQ6PCB8 327 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 C6orf89Q6UWU4 347 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 CYP26C1Q6V0L0 522 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 KDM7AQ6ZMT4 941 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 SGMS1Q86VZ5 419 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 JAZF1Q86VZ6 243 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 DCP2Q8IU60 420 aaKnown RBP3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 NOSTRINQ8IVI9 506 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 FAM126BQ8IXS8 530 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 PPIL6Q8IXY8 311 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 EIF1ADQ8N9N8 165 aaKnown RBP3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 ACRBPQ8NEB7 543 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 ST13P5Q8NFI4 369 aaPredicted RBP3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 TBC1D16Q8TBP0 767 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 ATRIPQ8WXE1 791 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 ALG3Q92685 438 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 P3H4Q92791 437 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 DIO2Q92813 273 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 ZNF669Q96BR6 464 aaPredicted RBP3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 FAXDC2Q96IV6 333 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 CCDC140Q96MF4 163 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 GSDMAQ96QA5 445 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 MMS19Q96T76 1030 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 CDC5LQ99459 802 aaKnown RBP3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 RHOXF2Q9BQY4 288 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 CRACR2AQ9BSW2 395 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 ALG1Q9BT22 464 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 IER2Q9BTL4 223 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 MYL10Q9BUA6 226 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 CAPS2Q9BXY5 557 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 PUS7LQ9H0K6 701 aaKnown RBP3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 FOXP1Q9H334 677 aaPredicted RBP3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 ACTR5Q9H9F9 607 aaPredicted RBP3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 ATP6V0A4Q9HBG4 840 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 LZTFL1Q9NQ48 299 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 TOMM22Q9NS69 142 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 SAMSN1Q9NSI8 373 aaKnown RBP3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 PAG1Q9NWQ8 432 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 AATFQ9NY61 560 aaKnown RBP eCLIP3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 GOLGA6AQ9NYA3 693 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 HSPBP1Q9NZL4 362 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 FAM184BQ9ULE4 1060 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 TSC22D4Q9Y3Q8 395 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 TIMM13Q9Y5L4 95 aaPredicted RBP3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 SRPRBQ9Y5M8 271 aaKnown RBP3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 COL4A3BPQ9Y5P4 624 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 PLXNB2O15031 1838 aa3.78□□□□□ -1.8
CRNKL1-203ENST00000490258 WDR81Q562E7 1941 aa3.78□□□□□ -1.81
CRNKL1-203ENST00000490258 TCRBV5S2A0A599 114 aa3.77□□□□□ -1.81
CRNKL1-203ENST00000490258 C5orf60A6NFR6 353 aa3.77□□□□□ -1.81
CRNKL1-203ENST00000490258 H7BY64 318 aa3.77□□□□□ -1.81
CRNKL1-203ENST00000490258 PPP1R12AO14974 1030 aaPredicted RBP3.77□□□□□ -1.81
CRNKL1-203ENST00000490258 FOXN1O15353 648 aa3.77□□□□□ -1.81
CRNKL1-203ENST00000490258 TEX33O43247 280 aa3.77□□□□□ -1.81
CRNKL1-203ENST00000490258 PPIP5K2O43314 1243 aa3.77□□□□□ -1.81
CRNKL1-203ENST00000490258 ECE2O60344 883 aa3.77□□□□□ -1.81
CRNKL1-203ENST00000490258 NOBOXO60393 691 aa3.77□□□□□ -1.81
CRNKL1-203ENST00000490258 RANBP6O60518 1105 aaKnown RBP3.77□□□□□ -1.81
CRNKL1-203ENST00000490258 PRDM1O75626 825 aa3.77□□□□□ -1.81
CRNKL1-203ENST00000490258 STK10O94804 968 aaKnown RBP3.77□□□□□ -1.81
CRNKL1-203ENST00000490258 PDE8BO95263 885 aa3.77□□□□□ -1.81
CRNKL1-203ENST00000490258 NDUFA10O95299 355 aa3.77□□□□□ -1.81
CRNKL1-203ENST00000490258 BMP15O95972 392 aa3.77□□□□□ -1.81
CRNKL1-203ENST00000490258 PAEPP09466 180 aa3.77□□□□□ -1.81
CRNKL1-203ENST00000490258 C6orf222P0C671 652 aaPredicted RBP3.77□□□□□ -1.81
CRNKL1-203ENST00000490258 GCFC2P16383 781 aaKnown RBP3.77□□□□□ -1.81
CRNKL1-203ENST00000490258 PDE6AP16499 860 aa3.77□□□□□ -1.81
CRNKL1-203ENST00000490258 MARCKSP29966 332 aaPredicted RBP3.77□□□□□ -1.81
CRNKL1-203ENST00000490258 HNRNPH3P31942 346 aaKnown RBP3.77□□□□□ -1.81
CRNKL1-203ENST00000490258 CASP14P31944 242 aa3.77□□□□□ -1.81
CRNKL1-203ENST00000490258 IL15P40933 162 aaPredicted RBP3.77□□□□□ -1.81
CRNKL1-203ENST00000490258 TOB1P50616 345 aaPredicted RBP3.77□□□□□ -1.81
CRNKL1-203ENST00000490258 EPHB4P54760 987 aa3.77□□□□□ -1.81
CRNKL1-203ENST00000490258 NAP1L1P55209 391 aaKnown RBP3.77□□□□□ -1.81
CRNKL1-203ENST00000490258 ITGA1P56199 1179 aa3.77□□□□□ -1.81
CRNKL1-203ENST00000490258 SLC8A3P57103 927 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms