RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, human

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-218	ENST00000490032	RBM20	Q5T481	1227 aa	Known RBP	4.93	□□□□□ -1.62
HMGN1-218	ENST00000490032	EMC10	Q5UCC4	262 aa		4.93	□□□□□ -1.62
HMGN1-218	ENST00000490032	CATIP	Q7Z7H3	387 aa		4.93	□□□□□ -1.62
HMGN1-218	ENST00000490032	ZBTB46	Q86UZ6	589 aa		4.93	□□□□□ -1.62
HMGN1-218	ENST00000490032	TNPO1	Q92973	898 aa	Known RBP	4.93	□□□□□ -1.62
HMGN1-218	ENST00000490032	FKBP10	Q96AY3	582 aa		4.93	□□□□□ -1.62
HMGN1-218	ENST00000490032	HAPLN3	Q96S86	360 aa		4.93	□□□□□ -1.62
HMGN1-218	ENST00000490032	ACTRT3	Q9BYD9	372 aa		4.93	□□□□□ -1.62
HMGN1-218	ENST00000490032	TPSD1	Q9BZJ3	242 aa		4.93	□□□□□ -1.62
HMGN1-218	ENST00000490032	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	4.93	□□□□□ -1.62
HMGN1-218	ENST00000490032	PNPO	Q9NVS9	261 aa		4.93	□□□□□ -1.62
HMGN1-218	ENST00000490032	EHD3	Q9NZN3	535 aa		4.93	□□□□□ -1.62
HMGN1-218	ENST00000490032	RAD54B	Q9Y620	910 aa		4.93	□□□□□ -1.62
HMGN1-218	ENST00000490032	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		4.92	□□□□□ -1.62
HMGN1-218	ENST00000490032	VPS4B	O75351	444 aa		4.92	□□□□□ -1.62
HMGN1-218	ENST00000490032	TTLL1	O95922	423 aa		4.92	□□□□□ -1.62
HMGN1-218	ENST00000490032	GNAI2	P04899	355 aa		4.92	□□□□□ -1.62
HMGN1-218	ENST00000490032	VCAM1	P19320	739 aa		4.92	□□□□□ -1.62
HMGN1-218	ENST00000490032	PCSK6	P29122	969 aa		4.92	□□□□□ -1.62
HMGN1-218	ENST00000490032	CD6	P30203	668 aa		4.92	□□□□□ -1.62
HMGN1-218	ENST00000490032	GCLC	P48506	637 aa	Predicted RBP	4.92	□□□□□ -1.62
HMGN1-218	ENST00000490032	NEK2	P51955	445 aa		4.92	□□□□□ -1.62
HMGN1-218	ENST00000490032	EXOSC10	Q01780	885 aa	Known RBP	4.92	□□□□□ -1.62
HMGN1-218	ENST00000490032	BOP1	Q14137	746 aa	Known RBP	4.92	□□□□□ -1.62
HMGN1-218	ENST00000490032	FAM160B1	Q5W0V3	765 aa		4.92	□□□□□ -1.62
HMGN1-218	ENST00000490032	HASPIN	Q8TF76	798 aa		4.92	□□□□□ -1.62
HMGN1-218	ENST00000490032	FAM136A	Q96C01	138 aa		4.92	□□□□□ -1.62
HMGN1-218	ENST00000490032	MVB12A	Q96EY5	273 aa		4.92	□□□□□ -1.62
HMGN1-218	ENST00000490032	GPATCH3	Q96I76	525 aa		4.92	□□□□□ -1.62
HMGN1-218	ENST00000490032	NELL2	Q99435	816 aa		4.92	□□□□□ -1.62
HMGN1-218	ENST00000490032	SERTAD4	Q9NUC0	356 aa		4.92	□□□□□ -1.62
HMGN1-218	ENST00000490032	ST3GAL5	Q9UNP4	418 aa		4.92	□□□□□ -1.62
HMGN1-218	ENST00000490032	NR2E3	Q9Y5X4	410 aa		4.92	□□□□□ -1.62
HMGN1-218	ENST00000490032	WNT6	Q9Y6F9	365 aa		4.92	□□□□□ -1.62
HMGN1-218	ENST00000490032	COL3A1	P02461	1466 aa	Predicted RBP	4.92	□□□□□ -1.62
HMGN1-218	ENST00000490032	AOX1	Q06278	1338 aa		4.92	□□□□□ -1.62
HMGN1-218	ENST00000490032	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	4.92	□□□□□ -1.62
HMGN1-218	ENST00000490032		M0QYG6	137 aa		4.91	□□□□□ -1.62
HMGN1-218	ENST00000490032	DNAJB5	O75953	348 aa		4.91	□□□□□ -1.62
HMGN1-218	ENST00000490032	AHSG	P02765	367 aa		4.91	□□□□□ -1.62
HMGN1-218	ENST00000490032	NR2F6	P10588	404 aa		4.91	□□□□□ -1.62
HMGN1-218	ENST00000490032	PIM1	P11309	404 aa	Predicted RBP	4.91	□□□□□ -1.62
HMGN1-218	ENST00000490032	ZFX	P17010	805 aa	Predicted RBP	4.91	□□□□□ -1.62
HMGN1-218	ENST00000490032	CHRM3	P20309	590 aa		4.91	□□□□□ -1.62
HMGN1-218	ENST00000490032	BMPR2	Q13873	1038 aa		4.91	□□□□□ -1.62
HMGN1-218	ENST00000490032	PLS1	Q14651	629 aa		4.91	□□□□□ -1.62
HMGN1-218	ENST00000490032	FAM153C	Q494X1	144 aa		4.91	□□□□□ -1.62
HMGN1-218	ENST00000490032	VPS53	Q5VIR6	699 aa		4.91	□□□□□ -1.62
HMGN1-218	ENST00000490032	FCRLB	Q6BAA4	426 aa		4.91	□□□□□ -1.62
HMGN1-218	ENST00000490032	RASAL3	Q86YV0	1011 aa		4.91	□□□□□ -1.62
HMGN1-218	ENST00000490032	DPF1	Q92782	380 aa		4.91	□□□□□ -1.62
HMGN1-218	ENST00000490032	HPS3	Q969F9	1004 aa		4.91	□□□□□ -1.62
HMGN1-218	ENST00000490032	DKK3	Q9UBP4	350 aa		4.91	□□□□□ -1.62
HMGN1-218	ENST00000490032	HESX1	Q9UBX0	185 aa		4.91	□□□□□ -1.62
HMGN1-218	ENST00000490032	NOP58	Q9Y2X3	529 aa	Known RBP	4.91	□□□□□ -1.62
HMGN1-218	ENST00000490032	PCDHA1	Q9Y5I3	950 aa		4.91	□□□□□ -1.62
HMGN1-218	ENST00000490032	ABLIM3	O94929	683 aa		4.9	□□□□□ -1.63
HMGN1-218	ENST00000490032	DRD4	P21917	467 aa		4.9	□□□□□ -1.63
HMGN1-218	ENST00000490032	TBCC	Q15814	346 aa		4.9	□□□□□ -1.63
HMGN1-218	ENST00000490032	PLAC9	Q5JTB6	97 aa		4.9	□□□□□ -1.63
HMGN1-218	ENST00000490032	ATAT1	Q5SQI0	421 aa		4.9	□□□□□ -1.63
HMGN1-218	ENST00000490032	TEDDM1	Q5T9Z0	273 aa		4.9	□□□□□ -1.63
HMGN1-218	ENST00000490032	ZNF551	Q7Z340	670 aa	Predicted RBP	4.9	□□□□□ -1.63
HMGN1-218	ENST00000490032	AMIGO2	Q86SJ2	522 aa		4.9	□□□□□ -1.63
HMGN1-218	ENST00000490032	DTX2	Q86UW9	622 aa		4.9	□□□□□ -1.63
HMGN1-218	ENST00000490032	FAM46D	Q8NEK8	389 aa		4.9	□□□□□ -1.63
HMGN1-218	ENST00000490032	BRIX1	Q8TDN6	353 aa	Known RBP	4.9	□□□□□ -1.63
HMGN1-218	ENST00000490032	ATRIP	Q8WXE1	791 aa		4.9	□□□□□ -1.63
HMGN1-218	ENST00000490032	SERHL	Q9NQF3	203 aa		4.9	□□□□□ -1.63
HMGN1-218	ENST00000490032	ANKRD6	Q9Y2G4	727 aa		4.9	□□□□□ -1.63
HMGN1-218	ENST00000490032	NXPH3	O95157	252 aa		4.89	□□□□□ -1.63
HMGN1-218	ENST00000490032	PRKCG	P05129	697 aa		4.89	□□□□□ -1.63
HMGN1-218	ENST00000490032	JUP	P14923	745 aa		4.89	□□□□□ -1.63
HMGN1-218	ENST00000490032	HDC	P19113	662 aa		4.89	□□□□□ -1.63
HMGN1-218	ENST00000490032	CCT8	P50990	548 aa		4.89	□□□□□ -1.63
HMGN1-218	ENST00000490032	ZNF134	P52741	427 aa		4.89	□□□□□ -1.63
HMGN1-218	ENST00000490032	EXOSC9	Q06265	439 aa	Known RBP	4.89	□□□□□ -1.63
HMGN1-218	ENST00000490032	ZNF618	Q5T7W0	954 aa		4.89	□□□□□ -1.63
HMGN1-218	ENST00000490032	SFRP4	Q6FHJ7	346 aa	Predicted RBP	4.89	□□□□□ -1.63
HMGN1-218	ENST00000490032	CAMKK1	Q8N5S9	505 aa		4.89	□□□□□ -1.63
HMGN1-218	ENST00000490032	KLHDC4	Q8TBB5	520 aa		4.89	□□□□□ -1.63
HMGN1-218	ENST00000490032	HOOK2	Q96ED9	719 aa		4.89	□□□□□ -1.63
HMGN1-218	ENST00000490032	SLC35A4	Q96G79	324 aa		4.89	□□□□□ -1.63
HMGN1-218	ENST00000490032	CDK5RAP3	Q96JB5	506 aa		4.89	□□□□□ -1.63
HMGN1-218	ENST00000490032	TYW1	Q9NV66	732 aa	Known RBP	4.89	□□□□□ -1.63
HMGN1-218	ENST00000490032	DNAJC9-AS1	A6NH13	148 aa		4.88	□□□□□ -1.63
HMGN1-218	ENST00000490032	MANSC4	A6NHS7	340 aa	Predicted RBP	4.88	□□□□□ -1.63
HMGN1-218	ENST00000490032		H3BUI4	141 aa		4.88	□□□□□ -1.63
HMGN1-218	ENST00000490032	DCLK1	O15075	740 aa		4.88	□□□□□ -1.63
HMGN1-218	ENST00000490032	ATXN1L	P0C7T5	689 aa	Known RBP	4.88	□□□□□ -1.63
HMGN1-218	ENST00000490032	IBSP	P21815	317 aa	Predicted RBP	4.88	□□□□□ -1.63
HMGN1-218	ENST00000490032	SOX8	P57073	446 aa		4.88	□□□□□ -1.63
HMGN1-218	ENST00000490032	LOXL3	P58215	753 aa		4.88	□□□□□ -1.63
HMGN1-218	ENST00000490032	TFF2	Q03403	129 aa		4.88	□□□□□ -1.63
HMGN1-218	ENST00000490032	SRSF4	Q08170	494 aa	Known RBP	4.88	□□□□□ -1.63
HMGN1-218	ENST00000490032	KIAA1614	Q5VZ46	1190 aa		4.88	□□□□□ -1.63
HMGN1-218	ENST00000490032	ICE2	Q659A1	982 aa		4.88	□□□□□ -1.63
HMGN1-218	ENST00000490032	TMEM108	Q6UXF1	575 aa		4.88	□□□□□ -1.63
HMGN1-218	ENST00000490032	SEMA6D	Q8NFY4	1073 aa		4.88	□□□□□ -1.63
HMGN1-218	ENST00000490032	C1GALT1C1	Q96EU7	318 aa		4.88	□□□□□ -1.63

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