RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 ARID3AQ99856 593 aa15.42■□□□□ 0.06
HLA-F-229ENST00000489502 SYT15Q9BQS2 421 aa15.42■□□□□ 0.06
HLA-F-229ENST00000489502 CRISPLD1Q9H336 500 aa15.42■□□□□ 0.06
HLA-F-229ENST00000489502 SNX25Q9H3E2 840 aa15.42■□□□□ 0.06
HLA-F-229ENST00000489502 DPEP3Q9H4B8 488 aa15.42■□□□□ 0.06
HLA-F-229ENST00000489502 TMLHEQ9NVH6 421 aa15.42■□□□□ 0.06
HLA-F-229ENST00000489502 TAB2Q9NYJ8 693 aa15.42■□□□□ 0.06
HLA-F-229ENST00000489502 COQ4Q9Y3A0 265 aa15.42■□□□□ 0.06
HLA-F-229ENST00000489502 PRRG1O14668 218 aa15.41■□□□□ 0.06
HLA-F-229ENST00000489502 ATP2C2O75185 946 aa15.41■□□□□ 0.06
HLA-F-229ENST00000489502 TACC1O75410 805 aa15.41■□□□□ 0.06
HLA-F-229ENST00000489502 ABLIM3O94929 683 aa15.41■□□□□ 0.06
HLA-F-229ENST00000489502 SEC24AO95486 1093 aa15.41■□□□□ 0.06
HLA-F-229ENST00000489502 PDGFRBP09619 1106 aa15.41■□□□□ 0.06
HLA-F-229ENST00000489502 P4HA1P13674 534 aa15.41■□□□□ 0.06
HLA-F-229ENST00000489502 PRKCSHP14314 528 aaPredicted RBP15.41■□□□□ 0.06
HLA-F-229ENST00000489502 HOXB8P17481 243 aaPredicted RBP15.41■□□□□ 0.06
HLA-F-229ENST00000489502 CD58P19256 250 aa15.41■□□□□ 0.06
HLA-F-229ENST00000489502 PCSK1P29120 753 aa15.41■□□□□ 0.06
HLA-F-229ENST00000489502 LHX1P48742 406 aa15.41■□□□□ 0.06
HLA-F-229ENST00000489502 GPR17Q13304 367 aa15.41■□□□□ 0.06
HLA-F-229ENST00000489502 SMAD4Q13485 552 aaKnown RBP15.41■□□□□ 0.06
HLA-F-229ENST00000489502 NCAPHQ15003 741 aa15.41■□□□□ 0.06
HLA-F-229ENST00000489502 MAN2A1Q16706 1144 aa15.41■□□□□ 0.06
HLA-F-229ENST00000489502 TPGS2Q68CL5 300 aa15.41■□□□□ 0.06
HLA-F-229ENST00000489502 ELMSAN1Q6PJG2 1045 aa15.41■□□□□ 0.06
HLA-F-229ENST00000489502 DPH6Q7L8W6 267 aa15.41■□□□□ 0.06
HLA-F-229ENST00000489502 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.41■□□□□ 0.06
HLA-F-229ENST00000489502 ATAD1Q8NBU5 361 aa15.41■□□□□ 0.06
HLA-F-229ENST00000489502 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.41■□□□□ 0.06
HLA-F-229ENST00000489502 ZNF461Q8TAF7 563 aa15.41■□□□□ 0.06
HLA-F-229ENST00000489502 SPATA18Q8TC71 538 aa15.41■□□□□ 0.06
HLA-F-229ENST00000489502 TATDN2Q93075 761 aa15.41■□□□□ 0.06
HLA-F-229ENST00000489502 LPIN3Q9BQK8 851 aa15.41■□□□□ 0.06
HLA-F-229ENST00000489502 OXCT2Q9BYC2 517 aaPredicted RBP15.41■□□□□ 0.06
HLA-F-229ENST00000489502 BCO2Q9BYV7 579 aa15.41■□□□□ 0.06
HLA-F-229ENST00000489502 PLEKHA4Q9H4M7 779 aa15.41■□□□□ 0.06
HLA-F-229ENST00000489502 CYP4F11Q9HBI6 524 aa15.41■□□□□ 0.06
HLA-F-229ENST00000489502 FANCLQ9NW38 375 aa15.41■□□□□ 0.06
HLA-F-229ENST00000489502 ABI2Q9NYB9 513 aaPredicted RBP15.41■□□□□ 0.06
HLA-F-229ENST00000489502 GCNT4Q9P109 453 aa15.41■□□□□ 0.06
HLA-F-229ENST00000489502 AFF4Q9UHB7 1163 aaKnown RBP15.41■□□□□ 0.06
HLA-F-229ENST00000489502 USP15Q9Y4E8 981 aaPredicted RBP15.41■□□□□ 0.06
HLA-F-229ENST00000489502 YIPF1Q9Y548 306 aa15.41■□□□□ 0.06
HLA-F-229ENST00000489502 DENND4AQ7Z401 1863 aa15.41■□□□□ 0.06
HLA-F-229ENST00000489502 DOCK6Q96HP0 2047 aa15.41■□□□□ 0.06
HLA-F-229ENST00000489502 TCF20Q9UGU0 1960 aaKnown RBP15.4■□□□□ 0.06
HLA-F-229ENST00000489502 CCL16O15467 120 aa15.4■□□□□ 0.06
HLA-F-229ENST00000489502 MBTPS2O43462 519 aa15.4■□□□□ 0.06
HLA-F-229ENST00000489502 ZMYND10O75800 440 aa15.4■□□□□ 0.06
HLA-F-229ENST00000489502 SOAT2O75908 522 aa15.4■□□□□ 0.06
HLA-F-229ENST00000489502 IL9P15248 144 aa15.4■□□□□ 0.06
HLA-F-229ENST00000489502 ATF2P15336 505 aa15.4■□□□□ 0.06
HLA-F-229ENST00000489502 TCP11X2Q5H9J9 407 aa15.4■□□□□ 0.06
HLA-F-229ENST00000489502 WDR44Q5JSH3 913 aa15.4■□□□□ 0.06
HLA-F-229ENST00000489502 PPM1LQ5SGD2 360 aa15.4■□□□□ 0.06
HLA-F-229ENST00000489502 PTCRAQ6ISU1 281 aaPredicted RBP15.4■□□□□ 0.06
HLA-F-229ENST00000489502 ZNF707Q96C28 371 aaPredicted RBP15.4■□□□□ 0.06
HLA-F-229ENST00000489502 PKMYT1Q99640 499 aa15.4■□□□□ 0.06
HLA-F-229ENST00000489502 TUBGCP2Q9BSJ2 902 aa15.4■□□□□ 0.06
HLA-F-229ENST00000489502 CRACR2AQ9BSW2 395 aa15.4■□□□□ 0.06
HLA-F-229ENST00000489502 RHOBTB2Q9BYZ6 727 aa15.4■□□□□ 0.06
HLA-F-229ENST00000489502 NAT10Q9H0A0 1025 aaKnown RBP15.4■□□□□ 0.06
HLA-F-229ENST00000489502 INTS2Q9H0H0 1204 aaKnown RBP15.4■□□□□ 0.06
HLA-F-229ENST00000489502 S1PR5Q9H228 398 aa15.4■□□□□ 0.06
HLA-F-229ENST00000489502 CRTAC1Q9NQ79 661 aa15.4■□□□□ 0.06
HLA-F-229ENST00000489502 INSL5Q9Y5Q6 135 aa15.4■□□□□ 0.06
HLA-F-229ENST00000489502 PTPRDP23468 1912 aa15.4■□□□□ 0.06
HLA-F-229ENST00000489502 MYBPHLA2RUH7 354 aa15.39■□□□□ 0.05
HLA-F-229ENST00000489502 A8MXQ7 604 aa15.39■□□□□ 0.05
HLA-F-229ENST00000489502 PES1O00541 588 aaKnown RBP15.39■□□□□ 0.05
HLA-F-229ENST00000489502 C1RP00736 705 aa15.39■□□□□ 0.05
HLA-F-229ENST00000489502 EEF1GP26641 437 aaKnown RBP15.39■□□□□ 0.05
HLA-F-229ENST00000489502 ELF1P32519 619 aa15.39■□□□□ 0.05
HLA-F-229ENST00000489502 GNL1P36915 607 aaPredicted RBP15.39■□□□□ 0.05
HLA-F-229ENST00000489502 ZNF165P49910 485 aa15.39■□□□□ 0.05
HLA-F-229ENST00000489502 NDST1P52848 882 aa15.39■□□□□ 0.05
HLA-F-229ENST00000489502 MRPS5P82675 430 aaKnown RBP15.39■□□□□ 0.05
HLA-F-229ENST00000489502 DUSP4Q13115 394 aa15.39■□□□□ 0.05
HLA-F-229ENST00000489502 KRT31Q15323 416 aa15.39■□□□□ 0.05
HLA-F-229ENST00000489502 MDH1BQ5I0G3 518 aa15.39■□□□□ 0.05
HLA-F-229ENST00000489502 MIIPQ5JXC2 388 aa15.39■□□□□ 0.05
HLA-F-229ENST00000489502 CCDC149Q6ZUS6 474 aa15.39■□□□□ 0.05
HLA-F-229ENST00000489502 DHX40Q8IX18 779 aaKnown RBP15.39■□□□□ 0.05
HLA-F-229ENST00000489502 TCEAL8Q8IYN2 117 aa15.39■□□□□ 0.05
HLA-F-229ENST00000489502 DCP1BQ8IZD4 617 aaKnown RBP15.39■□□□□ 0.05
HLA-F-229ENST00000489502 LMO3Q8TAP4 145 aa15.39■□□□□ 0.05
HLA-F-229ENST00000489502 HDAC7Q8WUI4 952 aa15.39■□□□□ 0.05
HLA-F-229ENST00000489502 SMG7Q92540 1137 aaKnown RBP15.39■□□□□ 0.05
HLA-F-229ENST00000489502 MYLPFQ96A32 169 aa15.39■□□□□ 0.05
HLA-F-229ENST00000489502 NT5C1BQ96P26 610 aa15.39■□□□□ 0.05
HLA-F-229ENST00000489502 TWNKQ96RR1 684 aa15.39■□□□□ 0.05
HLA-F-229ENST00000489502 SEPT5Q99719 369 aaPredicted RBP15.39■□□□□ 0.05
HLA-F-229ENST00000489502 ACBD6Q9BR61 282 aa15.39■□□□□ 0.05
HLA-F-229ENST00000489502 HSD3B7Q9H2F3 369 aa15.39■□□□□ 0.05
HLA-F-229ENST00000489502 ZDHHC7Q9NXF8 308 aa15.39■□□□□ 0.05
HLA-F-229ENST00000489502 DPP7Q9UHL4 492 aa15.39■□□□□ 0.05
HLA-F-229ENST00000489502 GTF3C4Q9UKN8 822 aa15.39■□□□□ 0.05
HLA-F-229ENST00000489502 CDH9Q9ULB4 789 aa15.39■□□□□ 0.05
HLA-F-229ENST00000489502 SLC27A5Q9Y2P5 690 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms