RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 KIF5CO60282 957 aa22.2■■□□□ 1.14
SND1-214ENST00000489417 TNNT1P13805 278 aa22.2■■□□□ 1.14
SND1-214ENST00000489417 WDR5P61964 334 aaKnown RBP22.2■■□□□ 1.14
SND1-214ENST00000489417 NOMO3P69849 1222 aa22.2■■□□□ 1.14
SND1-214ENST00000489417 NAA35Q5VZE5 725 aa22.2■■□□□ 1.14
SND1-214ENST00000489417 ACOT1Q86TX2 421 aa22.2■■□□□ 1.14
SND1-214ENST00000489417 LRRC43Q8N309 656 aa22.2■■□□□ 1.14
SND1-214ENST00000489417 BADQ92934 168 aa22.2■■□□□ 1.14
SND1-214ENST00000489417 TOP1MTQ969P6 601 aa22.2■■□□□ 1.14
SND1-214ENST00000489417 SUSD3Q96L08 255 aa22.2■■□□□ 1.14
SND1-214ENST00000489417 PCDH10Q9P2E7 1040 aa22.2■■□□□ 1.14
SND1-214ENST00000489417 STXBP5LQ9Y2K9 1186 aa22.2■■□□□ 1.14
SND1-214ENST00000489417 DUSP10Q9Y6W6 482 aa22.2■■□□□ 1.14
SND1-214ENST00000489417 FAM170AA1A519 330 aa22.19■■□□□ 1.14
SND1-214ENST00000489417 ARHGEF37A1IGU5 675 aa22.19■■□□□ 1.14
SND1-214ENST00000489417 BTNL10A8MVZ5 291 aa22.19■■□□□ 1.14
SND1-214ENST00000489417 I3L4J1 428 aa22.19■■□□□ 1.14
SND1-214ENST00000489417 M0QZQ0 153 aa22.19■■□□□ 1.14
SND1-214ENST00000489417 GABRDO14764 452 aa22.19■■□□□ 1.14
SND1-214ENST00000489417 HCRTO43612 131 aa22.19■■□□□ 1.14
SND1-214ENST00000489417 DGKIO75912 1065 aa22.19■■□□□ 1.14
SND1-214ENST00000489417 LSM8O95777 96 aaKnown RBP22.19■■□□□ 1.14
SND1-214ENST00000489417 TUBB4AP04350 444 aa22.19■■□□□ 1.14
SND1-214ENST00000489417 ITGB1P05556 798 aa22.19■■□□□ 1.14
SND1-214ENST00000489417 PDGFRBP09619 1106 aa22.19■■□□□ 1.14
SND1-214ENST00000489417 DEFB103AP81534 67 aa22.19■■□□□ 1.14
SND1-214ENST00000489417 CENPCQ03188 943 aa22.19■■□□□ 1.14
SND1-214ENST00000489417 FPGSQ05932 587 aa22.19■■□□□ 1.14
SND1-214ENST00000489417 CNGA2Q16280 664 aa22.19■■□□□ 1.14
SND1-214ENST00000489417 PPP1R2P3Q6NXS1 205 aa22.19■■□□□ 1.14
SND1-214ENST00000489417 CRYBG2Q8N1P7 616 aa22.19■■□□□ 1.14
SND1-214ENST00000489417 SPATA18Q8TC71 538 aa22.19■■□□□ 1.14
SND1-214ENST00000489417 CTNNBL1Q8WYA6 563 aaPredicted RBP22.19■■□□□ 1.14
SND1-214ENST00000489417 TMEM175Q9BSA9 504 aa22.19■■□□□ 1.14
SND1-214ENST00000489417 IRX2Q9BZI1 471 aaPredicted RBP22.19■■□□□ 1.14
SND1-214ENST00000489417 DPEP3Q9H4B8 488 aa22.19■■□□□ 1.14
SND1-214ENST00000489417 DSEQ9UL01 958 aa22.19■■□□□ 1.14
SND1-214ENST00000489417 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.19■■□□□ 1.14
SND1-214ENST00000489417 PRG3Q9Y2Y8 225 aaPredicted RBP22.19■■□□□ 1.14
SND1-214ENST00000489417 CEP83Q9Y592 693 aa22.19■■□□□ 1.14
SND1-214ENST00000489417 MACROD2A1Z1Q3 448 aa22.18■■□□□ 1.14
SND1-214ENST00000489417 F8W810 466 aa22.18■■□□□ 1.14
SND1-214ENST00000489417 O00370 1275 aa22.18■■□□□ 1.14
SND1-214ENST00000489417 ABCB4P21439 1286 aa22.18■■□□□ 1.14
SND1-214ENST00000489417 LMO2P25791 158 aa22.18■■□□□ 1.14
SND1-214ENST00000489417 NSFP46459 744 aaKnown RBP22.18■■□□□ 1.14
SND1-214ENST00000489417 LHX1P48742 406 aa22.18■■□□□ 1.14
SND1-214ENST00000489417 GNG11P61952 73 aa22.18■■□□□ 1.14
SND1-214ENST00000489417 ETF1P62495 437 aaKnown RBP22.18■■□□□ 1.14
SND1-214ENST00000489417 STILQ15468 1287 aa22.18■■□□□ 1.14
SND1-214ENST00000489417 DENND1BQ6P3S1 775 aa22.18■■□□□ 1.14
SND1-214ENST00000489417 METTL23Q86XA0 190 aa22.18■■□□□ 1.14
SND1-214ENST00000489417 TMEM35BQ8NCS4 154 aa22.18■■□□□ 1.14
SND1-214ENST00000489417 CPA5Q8WXQ8 436 aa22.18■■□□□ 1.14
SND1-214ENST00000489417 SECISBP2LQ93073 1101 aaKnown RBP22.18■■□□□ 1.14
SND1-214ENST00000489417 TNIP3Q96KP6 325 aa22.18■■□□□ 1.14
SND1-214ENST00000489417 HTATIP2Q9BUP3 242 aa22.18■■□□□ 1.14
SND1-214ENST00000489417 PCDHB8Q9UN66 801 aa22.18■■□□□ 1.14
SND1-214ENST00000489417 PAXBP1Q9Y5B6 917 aa22.18■■□□□ 1.14
SND1-214ENST00000489417 TIMM13Q9Y5L4 95 aaPredicted RBP22.18■■□□□ 1.14
SND1-214ENST00000489417 NCANO14594 1321 aa22.18■■□□□ 1.14
SND1-214ENST00000489417 NRP1O14786 923 aa22.17■■□□□ 1.14
SND1-214ENST00000489417 MICAL2O94851 1124 aa22.17■■□□□ 1.14
SND1-214ENST00000489417 CYP11A1P05108 521 aa22.17■■□□□ 1.14
SND1-214ENST00000489417 CDH5P33151 784 aaPredicted RBP22.17■■□□□ 1.14
SND1-214ENST00000489417 SLC11A1P49279 550 aa22.17■■□□□ 1.14
SND1-214ENST00000489417 COLEC11Q9BWP8 271 aa22.17■■□□□ 1.14
SND1-214ENST00000489417 ZNF518BQ9C0D4 1074 aa22.17■■□□□ 1.14
SND1-214ENST00000489417 THAP2Q9H0W7 228 aa22.17■■□□□ 1.14
SND1-214ENST00000489417 LHX5Q9H2C1 402 aa22.17■■□□□ 1.14
SND1-214ENST00000489417 DDX43Q9NXZ2 648 aaKnown RBP22.17■■□□□ 1.14
SND1-214ENST00000489417 MYO1AQ9UBC5 1043 aa22.17■■□□□ 1.14
SND1-214ENST00000489417 HCSTQ9UBK5 93 aa22.17■■□□□ 1.14
SND1-214ENST00000489417 FNDC1Q4ZHG4 1894 aaPredicted RBP22.17■■□□□ 1.14
SND1-214ENST00000489417 A0A0A6YYK5 440 aaPredicted RBP22.16■■□□□ 1.14
SND1-214ENST00000489417 FGBP02675 491 aa22.16■■□□□ 1.14
SND1-214ENST00000489417 ALDH2P05091 517 aa22.16■■□□□ 1.14
SND1-214ENST00000489417 TYMPP19971 482 aa22.16■■□□□ 1.14
SND1-214ENST00000489417 ZNF569Q5MCW4 686 aa22.16■■□□□ 1.14
SND1-214ENST00000489417 DNTTIP2Q5QJE6 756 aaKnown RBP22.16■■□□□ 1.14
SND1-214ENST00000489417 ARHGAP17Q68EM7 881 aa22.16■■□□□ 1.14
SND1-214ENST00000489417 LCLAT1Q6UWP7 414 aa22.16■■□□□ 1.14
SND1-214ENST00000489417 C16orf59Q7L2K0 433 aa22.16■■□□□ 1.14
SND1-214ENST00000489417 OTOP2Q7RTS6 562 aa22.16■■□□□ 1.14
SND1-214ENST00000489417 PHF13Q86YI8 300 aaPredicted RBP22.16■■□□□ 1.14
SND1-214ENST00000489417 RNF10Q8N5U6 811 aaKnown RBP22.16■■□□□ 1.14
SND1-214ENST00000489417 C12orf29Q8N999 325 aa22.16■■□□□ 1.14
SND1-214ENST00000489417 C1orf131Q8NDD1 294 aaKnown RBP22.16■■□□□ 1.14
SND1-214ENST00000489417 ARHGEF26Q96DR7 871 aa22.16■■□□□ 1.14
SND1-214ENST00000489417 SALL4Q9UJQ4 1053 aa22.16■■□□□ 1.14
SND1-214ENST00000489417 FAN1Q9Y2M0 1017 aa22.16■■□□□ 1.14
SND1-214ENST00000489417 COL4A6Q14031 1691 aa22.16■■□□□ 1.14
SND1-214ENST00000489417 M0QYV0 167 aa22.15■■□□□ 1.14
SND1-214ENST00000489417 TADA2AO75478 443 aa22.15■■□□□ 1.14
SND1-214ENST00000489417 MOCS3O95396 460 aa22.15■■□□□ 1.14
SND1-214ENST00000489417 GPC5P78333 572 aa22.15■■□□□ 1.14
SND1-214ENST00000489417 GOLGA7BQ2TAP0 167 aa22.15■■□□□ 1.14
SND1-214ENST00000489417 PPP1R26Q5T8A7 1209 aaPredicted RBP22.15■■□□□ 1.14
SND1-214ENST00000489417 SYT10Q6XYQ8 523 aa22.15■■□□□ 1.14
SND1-214ENST00000489417 ZNF365Q70YC5 407 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms