RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 SLC23A1Q9UHI7 598 aa5.19□□□□□ -1.58
XRN1-213ENST00000489241 DMRT1Q9Y5R6 373 aa5.19□□□□□ -1.58
XRN1-213ENST00000489241 DGKBQ9Y6T7 804 aa5.19□□□□□ -1.58
XRN1-213ENST00000489241 XDHP47989 1333 aa5.19□□□□□ -1.58
XRN1-213ENST00000489241 A0A1W2PPC4 97 aa5.18□□□□□ -1.58
XRN1-213ENST00000489241 TCRBV7S2A1N4TA0A589 114 aa5.18□□□□□ -1.58
XRN1-213ENST00000489241 TMEM191CA6NGB0 347 aa5.18□□□□□ -1.58
XRN1-213ENST00000489241 DRGXA6NNA5 263 aa5.18□□□□□ -1.58
XRN1-213ENST00000489241 DIRC3C9JPN6 131 aa5.18□□□□□ -1.58
XRN1-213ENST00000489241 ADAMTS3O15072 1205 aa5.18□□□□□ -1.58
XRN1-213ENST00000489241 GRM6O15303 877 aa5.18□□□□□ -1.58
XRN1-213ENST00000489241 FAM20BO75063 409 aa5.18□□□□□ -1.58
XRN1-213ENST00000489241 RECQL4O94761 1208 aa5.18□□□□□ -1.58
XRN1-213ENST00000489241 CD1AP06126 327 aa5.18□□□□□ -1.58
XRN1-213ENST00000489241 GNAI3P08754 354 aa5.18□□□□□ -1.58
XRN1-213ENST00000489241 HARSP12081 509 aaKnown RBP5.18□□□□□ -1.58
XRN1-213ENST00000489241 KRT4P19013 534 aa5.18□□□□□ -1.58
XRN1-213ENST00000489241 TECP42680 631 aa5.18□□□□□ -1.58
XRN1-213ENST00000489241 GRK6P43250 576 aa5.18□□□□□ -1.58
XRN1-213ENST00000489241 HSPA7P48741 367 aa5.18□□□□□ -1.58
XRN1-213ENST00000489241 RENBPP51606 427 aa5.18□□□□□ -1.58
XRN1-213ENST00000489241 NANOS3P60323 173 aaKnown RBP5.18□□□□□ -1.58
XRN1-213ENST00000489241 GNAI1P63096 354 aa5.18□□□□□ -1.58
XRN1-213ENST00000489241 RABL3Q5HYI8 236 aa5.18□□□□□ -1.58
XRN1-213ENST00000489241 C3orf38Q5JPI3 329 aa5.18□□□□□ -1.58
XRN1-213ENST00000489241 EMC10Q5UCC4 262 aa5.18□□□□□ -1.58
XRN1-213ENST00000489241 TLDC1Q6P9B6 456 aa5.18□□□□□ -1.58
XRN1-213ENST00000489241 FITM2Q8N6M3 262 aa5.18□□□□□ -1.58
XRN1-213ENST00000489241 RNF169Q8NCN4 708 aa5.18□□□□□ -1.58
XRN1-213ENST00000489241 CCT6BQ92526 530 aa5.18□□□□□ -1.58
XRN1-213ENST00000489241 MAML1Q92585 1016 aa5.18□□□□□ -1.58
XRN1-213ENST00000489241 HAS1Q92839 578 aa5.18□□□□□ -1.58
XRN1-213ENST00000489241 NMD3Q96D46 503 aaKnown RBP5.18□□□□□ -1.58
XRN1-213ENST00000489241 TMEM41AQ96HV5 264 aa5.18□□□□□ -1.58
XRN1-213ENST00000489241 NDC1Q9BTX1 674 aa5.18□□□□□ -1.58
XRN1-213ENST00000489241 PACSIN1Q9BY11 444 aa5.18□□□□□ -1.58
XRN1-213ENST00000489241 CPEB1Q9BZB8 566 aaKnown RBP5.18□□□□□ -1.58
XRN1-213ENST00000489241 DPH1Q9BZG8 443 aa5.18□□□□□ -1.58
XRN1-213ENST00000489241 GSTO2Q9H4Y5 243 aa5.18□□□□□ -1.58
XRN1-213ENST00000489241 GJB4Q9NTQ9 266 aa5.18□□□□□ -1.58
XRN1-213ENST00000489241 AFF4Q9UHB7 1163 aaKnown RBP5.18□□□□□ -1.58
XRN1-213ENST00000489241 PNMA2Q9UL42 364 aa5.18□□□□□ -1.58
XRN1-213ENST00000489241 PNPLA7Q6ZV29 1317 aa5.18□□□□□ -1.58
XRN1-213ENST00000489241 hCG_1642624A0A1W2PR95 340 aa5.17□□□□□ -1.58
XRN1-213ENST00000489241 PRSS29PA6NIE9 313 aa5.17□□□□□ -1.58
XRN1-213ENST00000489241 FOXN1O15353 648 aa5.17□□□□□ -1.58
XRN1-213ENST00000489241 TLR5O60602 858 aa5.17□□□□□ -1.58
XRN1-213ENST00000489241 HAUS5O94927 633 aa5.17□□□□□ -1.58
XRN1-213ENST00000489241 MATN4O95460 622 aa5.17□□□□□ -1.58
XRN1-213ENST00000489241 SBK3P0C264 359 aa5.17□□□□□ -1.58
XRN1-213ENST00000489241 PIK3CGP48736 1102 aa5.17□□□□□ -1.58
XRN1-213ENST00000489241 SOX8P57073 446 aa5.17□□□□□ -1.58
XRN1-213ENST00000489241 EXOSC9Q06265 439 aaKnown RBP5.17□□□□□ -1.58
XRN1-213ENST00000489241 ELF2Q15723 593 aa5.17□□□□□ -1.58
XRN1-213ENST00000489241 MPEG1Q2M385 716 aa5.17□□□□□ -1.58
XRN1-213ENST00000489241 LDHAL6AQ6ZMR3 332 aa5.17□□□□□ -1.58
XRN1-213ENST00000489241 MED25Q71SY5 747 aa5.17□□□□□ -1.58
XRN1-213ENST00000489241 UBE3BQ7Z3V4 1068 aa5.17□□□□□ -1.58
XRN1-213ENST00000489241 SYTL1Q8IYJ3 562 aa5.17□□□□□ -1.58
XRN1-213ENST00000489241 ZNF276Q8N554 614 aa5.17□□□□□ -1.58
XRN1-213ENST00000489241 MYCT1Q8N699 235 aa5.17□□□□□ -1.58
XRN1-213ENST00000489241 ATP11CQ8NB49 1132 aa5.17□□□□□ -1.58
XRN1-213ENST00000489241 TNPO1Q92973 898 aaKnown RBP5.17□□□□□ -1.58
XRN1-213ENST00000489241 LENG9Q96B70 501 aa5.17□□□□□ -1.58
XRN1-213ENST00000489241 NAP1L4Q99733 375 aaKnown RBP5.17□□□□□ -1.58
XRN1-213ENST00000489241 TTPALQ9BTX7 342 aa5.17□□□□□ -1.58
XRN1-213ENST00000489241 BRIP1Q9BX63 1249 aa5.17□□□□□ -1.58
XRN1-213ENST00000489241 SMURF2Q9HAU4 748 aa5.17□□□□□ -1.58
XRN1-213ENST00000489241 AGO4Q9HCK5 861 aaKnown RBP5.17□□□□□ -1.58
XRN1-213ENST00000489241 SACM1LQ9NTJ5 587 aa5.17□□□□□ -1.58
XRN1-213ENST00000489241 EIF2B4Q9UI10 523 aaKnown RBP5.17□□□□□ -1.58
XRN1-213ENST00000489241 TRIM43BA6NCK2 446 aa5.16□□□□□ -1.58
XRN1-213ENST00000489241 GRXCR1A8MXD5 290 aa5.16□□□□□ -1.58
XRN1-213ENST00000489241 PLA2G6O60733 806 aa5.16□□□□□ -1.58
XRN1-213ENST00000489241 SLC43A1O75387 559 aa5.16□□□□□ -1.58
XRN1-213ENST00000489241 ANXA1P04083 346 aa5.16□□□□□ -1.58
XRN1-213ENST00000489241 SPATA31D3P0C874 917 aa5.16□□□□□ -1.58
XRN1-213ENST00000489241 CKBP12277 381 aa5.16□□□□□ -1.58
XRN1-213ENST00000489241 RPS16P62249 146 aaKnown RBP5.16□□□□□ -1.58
XRN1-213ENST00000489241 ICA1Q05084 483 aa5.16□□□□□ -1.58
XRN1-213ENST00000489241 BIRC3Q13489 604 aa5.16□□□□□ -1.58
XRN1-213ENST00000489241 STARD3Q14849 445 aa5.16□□□□□ -1.58
XRN1-213ENST00000489241 PUM3Q15397 648 aaKnown RBP5.16□□□□□ -1.58
XRN1-213ENST00000489241 SLC35G1Q2M3R5 365 aa5.16□□□□□ -1.58
XRN1-213ENST00000489241 ARL13BQ3SXY8 428 aa5.16□□□□□ -1.58
XRN1-213ENST00000489241 CCDC38Q502W7 563 aa5.16□□□□□ -1.58
XRN1-213ENST00000489241 SPATA31D4Q6ZUB0 917 aa5.16□□□□□ -1.58
XRN1-213ENST00000489241 RHOUQ7L0Q8 258 aa5.16□□□□□ -1.58
XRN1-213ENST00000489241 MRGPREQ86SM8 312 aa5.16□□□□□ -1.58
XRN1-213ENST00000489241 DNAJC10Q8IXB1 793 aa5.16□□□□□ -1.58
XRN1-213ENST00000489241 SYNE4Q8N205 404 aa5.16□□□□□ -1.58
XRN1-213ENST00000489241 SPATA5Q8NB90 893 aa5.16□□□□□ -1.58
XRN1-213ENST00000489241 TRIM43Q96BQ3 446 aaPredicted RBP5.16□□□□□ -1.58
XRN1-213ENST00000489241 ZG16BQ96DA0 208 aa5.16□□□□□ -1.58
XRN1-213ENST00000489241 PHACTR3Q96KR7 559 aa5.16□□□□□ -1.58
XRN1-213ENST00000489241 BRD9Q9H8M2 597 aa5.16□□□□□ -1.58
XRN1-213ENST00000489241 RLIMQ9NVW2 624 aa5.16□□□□□ -1.58
XRN1-213ENST00000489241 FBXO34Q9NWN3 711 aa5.16□□□□□ -1.58
XRN1-213ENST00000489241 SAGE1Q9NXZ1 904 aa5.16□□□□□ -1.58
XRN1-213ENST00000489241 JKAMPQ9P055 326 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms