RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 BRD2P25440 801 aaKnown RBP13.64□□□□□ -0.23
TOP3A-206ENST00000489131 LHX1P48742 406 aa13.64□□□□□ -0.23
TOP3A-206ENST00000489131 C1QBPQ07021 282 aaKnown RBP13.64□□□□□ -0.23
TOP3A-206ENST00000489131 PTP4A2Q12974 167 aa13.64□□□□□ -0.23
TOP3A-206ENST00000489131 IFI16Q16666 785 aaKnown RBP13.64□□□□□ -0.23
TOP3A-206ENST00000489131 PKDCCQ504Y2 493 aa13.64□□□□□ -0.23
TOP3A-206ENST00000489131 TIGD5Q53EQ6 642 aa13.64□□□□□ -0.23
TOP3A-206ENST00000489131 SGO2Q562F6 1265 aa13.64□□□□□ -0.23
TOP3A-206ENST00000489131 MON1BQ7L1V2 547 aa13.64□□□□□ -0.23
TOP3A-206ENST00000489131 RHOT2Q8IXI1 618 aa13.64□□□□□ -0.23
TOP3A-206ENST00000489131 ABI1Q8IZP0 508 aa13.64□□□□□ -0.23
TOP3A-206ENST00000489131 TMEM35BQ8NCS4 154 aa13.64□□□□□ -0.23
TOP3A-206ENST00000489131 CTNNBL1Q8WYA6 563 aaPredicted RBP13.64□□□□□ -0.23
TOP3A-206ENST00000489131 TNIP3Q96KP6 325 aa13.64□□□□□ -0.23
TOP3A-206ENST00000489131 RC3H2Q9HBD1 1191 aaKnown RBP13.64□□□□□ -0.23
TOP3A-206ENST00000489131 SALL4Q9UJQ4 1053 aa13.64□□□□□ -0.23
TOP3A-206ENST00000489131 LRFN2Q9ULH4 789 aa13.64□□□□□ -0.23
TOP3A-206ENST00000489131 GUCA1BQ9UMX6 200 aa13.64□□□□□ -0.23
TOP3A-206ENST00000489131 TFR2Q9UP52 801 aa13.64□□□□□ -0.23
TOP3A-206ENST00000489131 INPP5FQ9Y2H2 1132 aa13.64□□□□□ -0.23
TOP3A-206ENST00000489131 DUSP10Q9Y6W6 482 aa13.64□□□□□ -0.23
TOP3A-206ENST00000489131 DGKIO75912 1065 aa13.63□□□□□ -0.23
TOP3A-206ENST00000489131 B3GAT3O94766 335 aa13.63□□□□□ -0.23
TOP3A-206ENST00000489131 CFHP08603 1231 aa13.63□□□□□ -0.23
TOP3A-206ENST00000489131 SETSIPP0DME0 302 aa13.63□□□□□ -0.23
TOP3A-206ENST00000489131 ODC1P11926 461 aa13.63□□□□□ -0.23
TOP3A-206ENST00000489131 IGFBP6P24592 240 aaPredicted RBP13.63□□□□□ -0.23
TOP3A-206ENST00000489131 GNL1P36915 607 aaPredicted RBP13.63□□□□□ -0.23
TOP3A-206ENST00000489131 GNG11P61952 73 aa13.63□□□□□ -0.23
TOP3A-206ENST00000489131 GPC5P78333 572 aa13.63□□□□□ -0.23
TOP3A-206ENST00000489131 ZNF394Q53GI3 561 aa13.63□□□□□ -0.23
TOP3A-206ENST00000489131 DEFB128Q7Z7B8 93 aa13.63□□□□□ -0.23
TOP3A-206ENST00000489131 SLFN11Q7Z7L1 901 aa13.63□□□□□ -0.23
TOP3A-206ENST00000489131 ZNF280BQ86YH2 543 aa13.63□□□□□ -0.23
TOP3A-206ENST00000489131 MCOLN2Q8IZK6 566 aa13.63□□□□□ -0.23
TOP3A-206ENST00000489131 LRRC43Q8N309 656 aa13.63□□□□□ -0.23
TOP3A-206ENST00000489131 WDTC1Q8N5D0 677 aa13.63□□□□□ -0.23
TOP3A-206ENST00000489131 KIF18AQ8NI77 898 aa13.63□□□□□ -0.23
TOP3A-206ENST00000489131 STK32AQ8WU08 396 aa13.63□□□□□ -0.23
TOP3A-206ENST00000489131 TOP1MTQ969P6 601 aa13.63□□□□□ -0.23
TOP3A-206ENST00000489131 ZNF689Q96CS4 500 aaPredicted RBP13.63□□□□□ -0.23
TOP3A-206ENST00000489131 CYFIP2Q96F07 1278 aa13.63□□□□□ -0.23
TOP3A-206ENST00000489131 NOX5Q96PH1 765 aa13.63□□□□□ -0.23
TOP3A-206ENST00000489131 WDR24Q96S15 920 aa13.63□□□□□ -0.23
TOP3A-206ENST00000489131 IRX2Q9BZI1 471 aaPredicted RBP13.63□□□□□ -0.23
TOP3A-206ENST00000489131 THAP2Q9H0W7 228 aa13.63□□□□□ -0.23
TOP3A-206ENST00000489131 IL23AQ9NPF7 189 aa13.63□□□□□ -0.23
TOP3A-206ENST00000489131 SEPT11Q9NVA2 429 aaKnown RBP13.63□□□□□ -0.23
TOP3A-206ENST00000489131 UVRAGQ9P2Y5 699 aa13.63□□□□□ -0.23
TOP3A-206ENST00000489131 PCDHB8Q9UN66 801 aa13.63□□□□□ -0.23
TOP3A-206ENST00000489131 CEP83Q9Y592 693 aa13.63□□□□□ -0.23
TOP3A-206ENST00000489131 PAXBP1Q9Y5B6 917 aa13.63□□□□□ -0.23
TOP3A-206ENST00000489131 CARNS1A5YM72 827 aa13.62□□□□□ -0.23
TOP3A-206ENST00000489131 A8MXQ7 604 aa13.62□□□□□ -0.23
TOP3A-206ENST00000489131 KIF4AO95239 1232 aa13.62□□□□□ -0.23
TOP3A-206ENST00000489131 EFEMP2O95967 443 aa13.62□□□□□ -0.23
TOP3A-206ENST00000489131 CALCAP01258 141 aa13.62□□□□□ -0.23
TOP3A-206ENST00000489131 CSF2RAP15509 400 aa13.62□□□□□ -0.23
TOP3A-206ENST00000489131 NSFP46459 744 aaKnown RBP13.62□□□□□ -0.23
TOP3A-206ENST00000489131 RPL34P49207 117 aaKnown RBP13.62□□□□□ -0.23
TOP3A-206ENST00000489131 NAA35Q5VZE5 725 aa13.62□□□□□ -0.23
TOP3A-206ENST00000489131 WSCD1Q658N2 575 aa13.62□□□□□ -0.23
TOP3A-206ENST00000489131 SYT10Q6XYQ8 523 aa13.62□□□□□ -0.23
TOP3A-206ENST00000489131 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.62□□□□□ -0.23
TOP3A-206ENST00000489131 OSTM1Q86WC4 334 aa13.62□□□□□ -0.23
TOP3A-206ENST00000489131 LRRC57Q8N9N7 239 aa13.62□□□□□ -0.23
TOP3A-206ENST00000489131 OR6B3Q8NGW1 331 aa13.62□□□□□ -0.23
TOP3A-206ENST00000489131 HEXIM2Q96MH2 286 aaKnown RBP13.62□□□□□ -0.23
TOP3A-206ENST00000489131 ALS2CR12Q96Q35 445 aa13.62□□□□□ -0.23
TOP3A-206ENST00000489131 SNX25Q9H3E2 840 aa13.62□□□□□ -0.23
TOP3A-206ENST00000489131 NRDE2Q9H7Z3 1164 aa13.62□□□□□ -0.23
TOP3A-206ENST00000489131 CYLDQ9NQC7 956 aa13.62□□□□□ -0.23
TOP3A-206ENST00000489131 CACNG4Q9UBN1 327 aa13.62□□□□□ -0.23
TOP3A-206ENST00000489131 CAPN6Q9Y6Q1 641 aa13.62□□□□□ -0.23
TOP3A-206ENST00000489131 TCRBV5S1A1TA0A578 114 aa13.61□□□□□ -0.23
TOP3A-206ENST00000489131 MACROD2A1Z1Q3 448 aa13.61□□□□□ -0.23
TOP3A-206ENST00000489131 SYN3O14994 580 aa13.61□□□□□ -0.23
TOP3A-206ENST00000489131 MICAL2O94851 1124 aa13.61□□□□□ -0.23
TOP3A-206ENST00000489131 AMHP03971 560 aa13.61□□□□□ -0.23
TOP3A-206ENST00000489131 CALB1P05937 261 aa13.61□□□□□ -0.23
TOP3A-206ENST00000489131 CD19P15391 556 aa13.61□□□□□ -0.23
TOP3A-206ENST00000489131 LMO2P25791 158 aa13.61□□□□□ -0.23
TOP3A-206ENST00000489131 PCSK1P29120 753 aa13.61□□□□□ -0.23
TOP3A-206ENST00000489131 GPD2P43304 727 aa13.61□□□□□ -0.23
TOP3A-206ENST00000489131 GABRB2P47870 512 aa13.61□□□□□ -0.23
TOP3A-206ENST00000489131 WDR5P61964 334 aaKnown RBP13.61□□□□□ -0.23
TOP3A-206ENST00000489131 RNASELQ05823 741 aaKnown RBP13.61□□□□□ -0.23
TOP3A-206ENST00000489131 PPIGQ13427 754 aaKnown RBP eCLIP13.61□□□□□ -0.23
TOP3A-206ENST00000489131 ZNF569Q5MCW4 686 aa13.61□□□□□ -0.23
TOP3A-206ENST00000489131 PLEKHA7Q6IQ23 1121 aa13.61□□□□□ -0.23
TOP3A-206ENST00000489131 DSTYKQ6XUX3 929 aa13.61□□□□□ -0.23
TOP3A-206ENST00000489131 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.61□□□□□ -0.23
TOP3A-206ENST00000489131 ACOT1Q86TX2 421 aa13.61□□□□□ -0.23
TOP3A-206ENST00000489131 B3GALNT2Q8NCR0 500 aa13.61□□□□□ -0.23
TOP3A-206ENST00000489131 TPCN2Q8NHX9 752 aa13.61□□□□□ -0.23
TOP3A-206ENST00000489131 SLC35G2Q8TBE7 412 aa13.61□□□□□ -0.23
TOP3A-206ENST00000489131 ARHGEF26Q96DR7 871 aa13.61□□□□□ -0.23
TOP3A-206ENST00000489131 FAM193BQ96PV7 902 aaPredicted RBP13.61□□□□□ -0.23
TOP3A-206ENST00000489131 HNRNPABQ99729 332 aaKnown RBP13.61□□□□□ -0.23
TOP3A-206ENST00000489131 ACBD6Q9BR61 282 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms