RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 OR10T2Q8NGX3 314 aa9.79□□□□□ -0.84
HDAC6-232ENST00000489053 SPATA18Q8TC71 538 aa9.79□□□□□ -0.84
HDAC6-232ENST00000489053 ATOH1Q92858 354 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-232ENST00000489053 SMARCD2Q92925 531 aa9.79□□□□□ -0.84
HDAC6-232ENST00000489053 PSMG2Q969U7 264 aa9.79□□□□□ -0.84
HDAC6-232ENST00000489053 SYAP1Q96A49 352 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-232ENST00000489053 E2F7Q96AV8 911 aa9.79□□□□□ -0.84
HDAC6-232ENST00000489053 TCEAL4Q96EI5 215 aa9.79□□□□□ -0.84
HDAC6-232ENST00000489053 CHAMP1Q96JM3 812 aa9.79□□□□□ -0.84
HDAC6-232ENST00000489053 TMEM209Q96SK2 561 aa9.79□□□□□ -0.84
HDAC6-232ENST00000489053 ACBD6Q9BR61 282 aa9.79□□□□□ -0.84
HDAC6-232ENST00000489053 IMPG2Q9BZV3 1241 aa9.79□□□□□ -0.84
HDAC6-232ENST00000489053 TBC1D17Q9HA65 648 aa9.79□□□□□ -0.84
HDAC6-232ENST00000489053 CEP72Q9P209 647 aa9.79□□□□□ -0.84
HDAC6-232ENST00000489053 L1RE1Q9UN81 338 aa9.79□□□□□ -0.84
HDAC6-232ENST00000489053 MRPS17Q9Y2R5 130 aaKnown RBP9.79□□□□□ -0.84
HDAC6-232ENST00000489053 TECTAO75443 2155 aa9.78□□□□□ -0.84
HDAC6-232ENST00000489053 WDFY4Q6ZS81 3184 aa9.78□□□□□ -0.84
HDAC6-232ENST00000489053 TGFB1I1O43294 461 aa9.78□□□□□ -0.84
HDAC6-232ENST00000489053 ZNF202O95125 648 aa9.78□□□□□ -0.84
HDAC6-232ENST00000489053 NR3C1P04150 777 aa9.78□□□□□ -0.84
HDAC6-232ENST00000489053 GJA1P17302 382 aa9.78□□□□□ -0.84
HDAC6-232ENST00000489053 AOC1P19801 751 aa9.78□□□□□ -0.84
HDAC6-232ENST00000489053 ACAT1P24752 427 aaKnown RBP9.78□□□□□ -0.84
HDAC6-232ENST00000489053 GABRR2P28476 465 aa9.78□□□□□ -0.84
HDAC6-232ENST00000489053 HOXD13P35453 343 aa9.78□□□□□ -0.84
HDAC6-232ENST00000489053 GPC5P78333 572 aa9.78□□□□□ -0.84
HDAC6-232ENST00000489053 STK4Q13043 487 aa9.78□□□□□ -0.84
HDAC6-232ENST00000489053 STIM1Q13586 685 aa9.78□□□□□ -0.84
HDAC6-232ENST00000489053 UBXN2BQ14CS0 331 aa9.78□□□□□ -0.84
HDAC6-232ENST00000489053 ZNF699Q32M78 642 aa9.78□□□□□ -0.84
HDAC6-232ENST00000489053 FAM78AQ5JUQ0 283 aa9.78□□□□□ -0.84
HDAC6-232ENST00000489053 GPR158Q5T848 1215 aa9.78□□□□□ -0.84
HDAC6-232ENST00000489053 DPH6Q7L8W6 267 aa9.78□□□□□ -0.84
HDAC6-232ENST00000489053 DNAJB7Q7Z6W7 309 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-232ENST00000489053 C12orf56Q8IXR9 622 aa9.78□□□□□ -0.84
HDAC6-232ENST00000489053 OR6B3Q8NGW1 331 aa9.78□□□□□ -0.84
HDAC6-232ENST00000489053 ZSCAN18Q8TBC5 510 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-232ENST00000489053 CSGALNACT1Q8TDX6 532 aa9.78□□□□□ -0.84
HDAC6-232ENST00000489053 GIPC2Q8TF65 315 aa9.78□□□□□ -0.84
HDAC6-232ENST00000489053 IRF7Q92985 503 aa9.78□□□□□ -0.84
HDAC6-232ENST00000489053 ELSPBP1Q96BH3 223 aa9.78□□□□□ -0.84
HDAC6-232ENST00000489053 TSG101Q99816 390 aa9.78□□□□□ -0.84
HDAC6-232ENST00000489053 SYT15Q9BQS2 421 aa9.78□□□□□ -0.84
HDAC6-232ENST00000489053 PI4K2AQ9BTU6 479 aa9.78□□□□□ -0.84
HDAC6-232ENST00000489053 TRMT61BQ9BVS5 477 aaKnown RBP9.78□□□□□ -0.84
HDAC6-232ENST00000489053 GTPBP4Q9BZE4 634 aaKnown RBP9.78□□□□□ -0.84
HDAC6-232ENST00000489053 SLC2A4RGQ9NR83 387 aa9.78□□□□□ -0.84
HDAC6-232ENST00000489053 GDAP2Q9NXN4 497 aa9.78□□□□□ -0.84
HDAC6-232ENST00000489053 EHD2Q9NZN4 543 aa9.78□□□□□ -0.84
HDAC6-232ENST00000489053 NXF1Q9UBU9 619 aaKnown RBP9.78□□□□□ -0.84
HDAC6-232ENST00000489053 MAGED2Q9UNF1 606 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-232ENST00000489053 HPSEQ9Y251 543 aa9.78□□□□□ -0.84
HDAC6-232ENST00000489053 WDR87Q6ZQQ6 2873 aa9.78□□□□□ -0.84
HDAC6-232ENST00000489053 ATP8B3O60423 1300 aa9.78□□□□□ -0.84
HDAC6-232ENST00000489053 ZNF263O14978 683 aa9.77□□□□□ -0.85
HDAC6-232ENST00000489053 NCAM2O15394 837 aa9.77□□□□□ -0.85
HDAC6-232ENST00000489053 GALR2O43603 387 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-232ENST00000489053 KINO60870 393 aaKnown RBP9.77□□□□□ -0.85
HDAC6-232ENST00000489053 PDGFRBP09619 1106 aa9.77□□□□□ -0.85
HDAC6-232ENST00000489053 CSH1P0DML2 217 aa9.77□□□□□ -0.85
HDAC6-232ENST00000489053 CSH2P0DML3 217 aa9.77□□□□□ -0.85
HDAC6-232ENST00000489053 HAPLN1P10915 354 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-232ENST00000489053 GDI1P31150 447 aa9.77□□□□□ -0.85
HDAC6-232ENST00000489053 ATICP31939 592 aa9.77□□□□□ -0.85
HDAC6-232ENST00000489053 GNL1P36915 607 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-232ENST00000489053 AVPR1AP37288 418 aa9.77□□□□□ -0.85
HDAC6-232ENST00000489053 WNT7BP56706 349 aa9.77□□□□□ -0.85
HDAC6-232ENST00000489053 CYP27A1Q02318 531 aa9.77□□□□□ -0.85
HDAC6-232ENST00000489053 PRKCQQ04759 706 aa9.77□□□□□ -0.85
HDAC6-232ENST00000489053 EHHADHQ08426 723 aa9.77□□□□□ -0.85
HDAC6-232ENST00000489053 SNW1Q13573 536 aaKnown RBP9.77□□□□□ -0.85
HDAC6-232ENST00000489053 GRM2Q14416 872 aa9.77□□□□□ -0.85
HDAC6-232ENST00000489053 MLF2Q15773 248 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-232ENST00000489053 WDR72Q3MJ13 1102 aa9.77□□□□□ -0.85
HDAC6-232ENST00000489053 ZNF667Q5HYK9 610 aa9.77□□□□□ -0.85
HDAC6-232ENST00000489053 INTS6LQ5JSJ4 861 aaKnown RBP9.77□□□□□ -0.85
HDAC6-232ENST00000489053 PRSS36Q5K4E3 855 aa9.77□□□□□ -0.85
HDAC6-232ENST00000489053 TANGO2Q6ICL3 276 aa9.77□□□□□ -0.85
HDAC6-232ENST00000489053 KIAA0895Q8NCT3 520 aa9.77□□□□□ -0.85
HDAC6-232ENST00000489053 TTC16Q8NEE8 873 aa9.77□□□□□ -0.85
HDAC6-232ENST00000489053 DEPDC1BQ8WUY9 529 aa9.77□□□□□ -0.85
HDAC6-232ENST00000489053 MRPS31Q92665 395 aaKnown RBP9.77□□□□□ -0.85
HDAC6-232ENST00000489053 FAM84AQ96KN4 292 aa9.77□□□□□ -0.85
HDAC6-232ENST00000489053 ASB16Q96NS5 453 aa9.77□□□□□ -0.85
HDAC6-232ENST00000489053 LPIN3Q9BQK8 851 aa9.77□□□□□ -0.85
HDAC6-232ENST00000489053 RPP25Q9BUL9 199 aaKnown RBP9.77□□□□□ -0.85
HDAC6-232ENST00000489053 BCO2Q9BYV7 579 aa9.77□□□□□ -0.85
HDAC6-232ENST00000489053 ABCB6Q9NP58 842 aa9.77□□□□□ -0.85
HDAC6-232ENST00000489053 THG1LQ9NWX6 298 aaKnown RBP9.77□□□□□ -0.85
HDAC6-232ENST00000489053 MAGEC2Q9UBF1 373 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-232ENST00000489053 UXTQ9UBK9 157 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-232ENST00000489053 SIX4Q9UIU6 781 aa9.77□□□□□ -0.85
HDAC6-232ENST00000489053 ZMYM5Q9UJ78 669 aa9.77□□□□□ -0.85
HDAC6-232ENST00000489053 GTF3C4Q9UKN8 822 aa9.77□□□□□ -0.85
HDAC6-232ENST00000489053 CDH9Q9ULB4 789 aa9.77□□□□□ -0.85
HDAC6-232ENST00000489053 MAPK8IP1Q9UQF2 711 aa9.77□□□□□ -0.85
HDAC6-232ENST00000489053 SIT1Q9Y3P8 196 aa9.77□□□□□ -0.85
HDAC6-232ENST00000489053 ZFHX2Q9C0A1 2572 aaPredicted RBP9.76□□□□□ -0.85
HDAC6-232ENST00000489053 TRIP11Q15643 1979 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms