RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 NSL1Q96IY1 281 aa14.98□□□□□ -0.01
RER1-207ENST00000488353 NUP85Q9BW27 656 aa14.98□□□□□ -0.01
RER1-207ENST00000488353 TMEM117Q9H0C3 514 aa14.98□□□□□ -0.01
RER1-207ENST00000488353 ASCC2Q9H1I8 757 aaPredicted RBP14.98□□□□□ -0.01
RER1-207ENST00000488353 NPHS2Q9NP85 383 aa14.98□□□□□ -0.01
RER1-207ENST00000488353 KCNH7Q9NS40 1196 aa14.98□□□□□ -0.01
RER1-207ENST00000488353 KRT82Q9NSB4 513 aa14.98□□□□□ -0.01
RER1-207ENST00000488353 TMCO1Q9UM00 188 aa14.98□□□□□ -0.01
RER1-207ENST00000488353 RPS6KL1Q9Y6S9 549 aa14.98□□□□□ -0.01
RER1-207ENST00000488353 COMMD3-BMI1R4GMX3 469 aa14.98□□□□□ -0.01
RER1-207ENST00000488353 UBTFL6P0CB48 400 aaPredicted RBP14.98□□□□□ -0.01
RER1-207ENST00000488353 KRT15P19012 456 aa14.98□□□□□ -0.01
RER1-207ENST00000488353 MXI1P50539 228 aa14.98□□□□□ -0.01
RER1-207ENST00000488353 PEX3P56589 373 aa14.98□□□□□ -0.01
RER1-207ENST00000488353 SPP2Q13103 211 aa14.98□□□□□ -0.01
RER1-207ENST00000488353 USP4Q13107 963 aa14.98□□□□□ -0.01
RER1-207ENST00000488353 WDR72Q3MJ13 1102 aa14.98□□□□□ -0.01
RER1-207ENST00000488353 B3GNT9Q6UX72 402 aa14.98□□□□□ -0.01
RER1-207ENST00000488353 HAUS6Q7Z4H7 955 aa14.98□□□□□ -0.01
RER1-207ENST00000488353 SCYL3Q8IZE3 742 aa14.98□□□□□ -0.01
RER1-207ENST00000488353 SMC1BQ8NDV3 1235 aa14.98□□□□□ -0.01
RER1-207ENST00000488353 EPS8L1Q8TE68 723 aa14.98□□□□□ -0.01
RER1-207ENST00000488353 PSPC1Q8WXF1 523 aaKnown RBP14.98□□□□□ -0.01
RER1-207ENST00000488353 ZNF75CPQ92670 426 aaPredicted RBP14.98□□□□□ -0.01
RER1-207ENST00000488353 PTCD3Q96EY7 689 aaKnown RBP14.98□□□□□ -0.01
RER1-207ENST00000488353 KREMEN1Q96MU8 473 aa14.98□□□□□ -0.01
RER1-207ENST00000488353 HAPLN3Q96S86 360 aa14.98□□□□□ -0.01
RER1-207ENST00000488353 CENPKQ9BS16 269 aa14.98□□□□□ -0.01
RER1-207ENST00000488353 TMEM206Q9H813 350 aa14.98□□□□□ -0.01
RER1-207ENST00000488353 KIAA1586Q9HCI6 787 aa14.98□□□□□ -0.01
RER1-207ENST00000488353 ANKFY1Q9P2R3 1169 aa14.98□□□□□ -0.01
RER1-207ENST00000488353 HAUS5O94927 633 aa14.97□□□□□ -0.01
RER1-207ENST00000488353 ADRB2P07550 413 aa14.97□□□□□ -0.01
RER1-207ENST00000488353 EIF2AK2P19525 551 aaKnown RBP14.97□□□□□ -0.01
RER1-207ENST00000488353 MAGEA4P43358 317 aa14.97□□□□□ -0.01
RER1-207ENST00000488353 LCA5Q86VQ0 697 aa14.97□□□□□ -0.01
RER1-207ENST00000488353 LPAR1Q92633 364 aa14.97□□□□□ -0.01
RER1-207ENST00000488353 SEMA4DQ92854 862 aa14.97□□□□□ -0.01
RER1-207ENST00000488353 TTC25Q96NG3 672 aa14.97□□□□□ -0.01
RER1-207ENST00000488353 FOXP3Q9BZS1 431 aa14.97□□□□□ -0.01
RER1-207ENST00000488353 RPAP3Q9H6T3 665 aaPredicted RBP14.97□□□□□ -0.01
RER1-207ENST00000488353 SLC38A10Q9HBR0 1119 aa14.97□□□□□ -0.01
RER1-207ENST00000488353 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.97□□□□□ -0.01
RER1-207ENST00000488353 UMODL1Q5DID0 1318 aa14.97□□□□□ -0.01
RER1-207ENST00000488353 CFAP69A5D8W1 941 aa14.97□□□□□ -0.01
RER1-207ENST00000488353 TTC36A6NLP5 189 aa14.97□□□□□ -0.01
RER1-207ENST00000488353 P4HBP07237 508 aaKnown RBP14.97□□□□□ -0.01
RER1-207ENST00000488353 ZCCHC18P0CG32 403 aa14.97□□□□□ -0.01
RER1-207ENST00000488353 SLC1A5Q15758 541 aa14.97□□□□□ -0.01
RER1-207ENST00000488353 LIN52Q52LA3 116 aa14.97□□□□□ -0.01
RER1-207ENST00000488353 PLEKHG4Q58EX7 1191 aa14.97□□□□□ -0.01
RER1-207ENST00000488353 PHLDB2Q86SQ0 1253 aa14.97□□□□□ -0.01
RER1-207ENST00000488353 PRUNE1Q86TP1 453 aa14.97□□□□□ -0.01
RER1-207ENST00000488353 CBWD2Q8IUF1 395 aa14.97□□□□□ -0.01
RER1-207ENST00000488353 RBM12BQ8IXT5 1001 aaKnown RBP14.97□□□□□ -0.01
RER1-207ENST00000488353 CCDC89Q8N998 374 aa14.97□□□□□ -0.01
RER1-207ENST00000488353 ATG4AQ8WYN0 398 aa14.97□□□□□ -0.01
RER1-207ENST00000488353 ZNF653Q96CK0 615 aa14.97□□□□□ -0.01
RER1-207ENST00000488353 DDX50Q9BQ39 737 aaKnown RBP14.97□□□□□ -0.01
RER1-207ENST00000488353 IL1RAPL1Q9NZN1 696 aa14.97□□□□□ -0.01
RER1-207ENST00000488353 NOCTQ9UK39 431 aaKnown RBP14.97□□□□□ -0.01
RER1-207ENST00000488353 ANGPTL2Q9UKU9 493 aa14.97□□□□□ -0.01
RER1-207ENST00000488353 PLS3P13797 630 aa14.96□□□□□ -0.01
RER1-207ENST00000488353 RPS12P25398 132 aaKnown RBP14.96□□□□□ -0.01
RER1-207ENST00000488353 VPS41P49754 854 aa14.96□□□□□ -0.01
RER1-207ENST00000488353 RARRES1P49788 294 aa14.96□□□□□ -0.01
RER1-207ENST00000488353 RPS6P62753 249 aaKnown RBP14.96□□□□□ -0.01
RER1-207ENST00000488353 MRPS9P82933 396 aaKnown RBP14.96□□□□□ -0.01
RER1-207ENST00000488353 CYP4F22Q6NT55 531 aa14.96□□□□□ -0.01
RER1-207ENST00000488353 ARHGAP24Q8N264 748 aa14.96□□□□□ -0.01
RER1-207ENST00000488353 STKLD1Q8NE28 680 aa14.96□□□□□ -0.01
RER1-207ENST00000488353 WDR60Q8WVS4 1066 aa14.96□□□□□ -0.01
RER1-207ENST00000488353 FAM84AQ96KN4 292 aa14.96□□□□□ -0.01
RER1-207ENST00000488353 TAAR1Q96RJ0 339 aa14.96□□□□□ -0.01
RER1-207ENST00000488353 RBM15Q96T37 977 aaKnown RBP eCLIP14.96□□□□□ -0.01
RER1-207ENST00000488353 RIT2Q99578 217 aa14.96□□□□□ -0.01
RER1-207ENST00000488353 DCLK3Q9C098 648 aa14.96□□□□□ -0.01
RER1-207ENST00000488353 MIS12Q9H081 205 aa14.96□□□□□ -0.01
RER1-207ENST00000488353 ARL8BQ9NVJ2 186 aa14.96□□□□□ -0.01
RER1-207ENST00000488353 UVRAGQ9P2Y5 699 aa14.96□□□□□ -0.01
RER1-207ENST00000488353 NUMBLQ9Y6R0 609 aa14.96□□□□□ -0.01
RER1-207ENST00000488353 ZNFX1Q9P2E3 1918 aaKnown RBP14.96□□□□□ -0.01
RER1-207ENST00000488353 BRCA1P38398 1863 aaKnown RBP14.96□□□□□ -0.01
RER1-207ENST00000488353 ZNF541Q9H0D2 1346 aa14.96□□□□□ -0.02
RER1-207ENST00000488353 CYP1A2P05177 515 aa14.95□□□□□ -0.02
RER1-207ENST00000488353 SETSIPP0DME0 302 aa14.95□□□□□ -0.02
RER1-207ENST00000488353 RRM1P23921 792 aa14.95□□□□□ -0.02
RER1-207ENST00000488353 GCAP28676 217 aa14.95□□□□□ -0.02
RER1-207ENST00000488353 FMO1Q01740 532 aa14.95□□□□□ -0.02
RER1-207ENST00000488353 LSAMPQ13449 338 aa14.95□□□□□ -0.02
RER1-207ENST00000488353 PKN2Q16513 984 aaKnown RBP14.95□□□□□ -0.02
RER1-207ENST00000488353 DPY19L2Q6NUT2 758 aa14.95□□□□□ -0.02
RER1-207ENST00000488353 ZNF365Q70YC5 407 aa14.95□□□□□ -0.02
RER1-207ENST00000488353 KBTBD2Q8IY47 623 aa14.95□□□□□ -0.02
RER1-207ENST00000488353 C4orf33Q8N1A6 199 aa14.95□□□□□ -0.02
RER1-207ENST00000488353 PDCD7Q8N8D1 485 aaKnown RBP14.95□□□□□ -0.02
RER1-207ENST00000488353 SYTL5Q8TDW5 730 aaPredicted RBP14.95□□□□□ -0.02
RER1-207ENST00000488353 DHX38Q92620 1227 aaKnown RBP14.95□□□□□ -0.02
RER1-207ENST00000488353 OLFM3Q96PB7 478 aa14.95□□□□□ -0.02
RER1-207ENST00000488353 KIFC3Q9BVG8 833 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms