RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 COL4A3BPQ9Y5P4 624 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 HTTP42858 3142 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 CXorf51AA0A1B0GTR3 108 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 TMEM238LA0A1B0GVL6 79 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 KRBA1A5PL33 1030 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 ZBTB43O43298 467 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 OAZ2O95190 189 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 CAPNS1P04632 268 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 CNPP09543 421 aaKnown RBP2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 C1SP09871 688 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 FCARP24071 287 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 KLRC2P26717 231 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 CDC25AP30304 524 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 ALDH1A3P47895 512 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 NAPAP54920 295 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 MRPS21P82921 87 aaKnown RBP2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 PLAURQ03405 335 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 ANKRD1Q15327 319 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 SPECC1Q5M775 1068 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 PPM1LQ5SGD2 360 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 HYIQ5T013 277 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 LARP1BQ659C4 914 aaKnown RBP2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 CREB3L3Q68CJ9 461 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 HGSNATQ68CP4 663 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 ALKAL1Q6UXT8 129 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 ZPBP2Q6X784 338 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 PIP4P1Q86T03 277 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 NOP9Q86U38 636 aaKnown RBP2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 ZBTB8OSQ8IWT0 167 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 CKAP2LQ8IYA6 745 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 SLC7A3Q8WY07 619 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 TBC1D5Q92609 795 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 RHOVQ96L33 236 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 UIMC1Q96RL1 719 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 TTPALQ9BTX7 342 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 BRD9Q9H8M2 597 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 RTEL1Q9NZ71 1219 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 SUCLA2Q9P2R7 463 aaPredicted RBP2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 RAPGEFL1Q9UHV5 662 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 TNFSF13BQ9Y275 285 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 MSRB2Q9Y3D2 182 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 DENND4CQ5VZ89 1909 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 K7ESF4 209 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 GFRA2O00451 464 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 NRP1O14786 923 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 MAN1A2O60476 641 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 TSPAN1O60635 241 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 ATP9AO75110 1047 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 NOL4O94818 638 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 ECEL1O95672 775 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 IGLV3-19P01714 112 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 NTRK1P04629 796 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 NEFLP07196 543 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 EDN3P14138 238 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 EPB42P16452 691 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 GARTP22102 1010 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 PROZP22891 400 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 LORP23490 312 aaPredicted RBP2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 PRPHP41219 470 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 MAGEA11P43364 429 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 TNFRSF4P43489 277 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 MCM2P49736 904 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 ST13P50502 369 aaKnown RBP2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 TUBP50607 506 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 PCBP4P57723 403 aaKnown RBP2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 MBTD1Q05BQ5 628 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 SPEM2Q0P670 501 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 DRP2Q13474 957 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 ALCAMQ13740 583 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 NAB2Q15742 525 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 ARHGAP15Q53QZ3 475 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 SPOUT1Q5T280 376 aaKnown RBP2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 MIER3Q7Z3K6 550 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 SMG8Q8ND04 991 aaKnown RBP2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 OR13H1Q8NG92 308 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 SNRNP27Q8WVK2 155 aaKnown RBP2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 GATA6Q92908 595 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 SMARCD2Q92925 531 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 PPP1R10Q96QC0 940 aaKnown RBP2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 UBL7Q96S82 380 aaPredicted RBP2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 DNAJC7Q99615 494 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 CERS4Q9HA82 394 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 IFT122Q9HBG6 1241 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 USP29Q9HBJ7 922 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 CBX8Q9HC52 389 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 TOPORSQ9NS56 1045 aaPredicted RBP2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 THG1LQ9NWX6 298 aaKnown RBP2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 KLHL42Q9P2K6 505 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 TJP2Q9UDY2 1190 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 PCDH15Q96QU1 1955 aa2.99□□□□□ -1.93
DEPDC1-203ENST00000488146 SMCO2A6NFE2 343 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 HIDE1A8MVS5 230 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 ACKR2O00590 384 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 SLC27A2O14975 620 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 ATXN7O15265 892 aaPredicted RBP2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 GAS7O60861 476 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 NPTXRO95502 500 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 APBB3O95704 486 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 F11P03951 625 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 RPLP1P05386 114 aaKnown RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms