RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 GPR17Q13304 367 aa14.22□□□□□ -0.13
COL4A6-207ENST00000487645 TPGS2Q68CL5 300 aa14.22□□□□□ -0.13
COL4A6-207ENST00000487645 DPY19L2P1Q6NXN4 242 aa14.22□□□□□ -0.13
COL4A6-207ENST00000487645 LILRA6Q6PI73 481 aa14.22□□□□□ -0.13
COL4A6-207ENST00000487645 SCARA5Q6ZMJ2 495 aa14.22□□□□□ -0.13
COL4A6-207ENST00000487645 OSTM1Q86WC4 334 aa14.22□□□□□ -0.13
COL4A6-207ENST00000487645 DCP1BQ8IZD4 617 aaKnown RBP14.22□□□□□ -0.13
COL4A6-207ENST00000487645 CRYBG2Q8N1P7 616 aa14.22□□□□□ -0.13
COL4A6-207ENST00000487645 PPM1KQ8N3J5 372 aa14.22□□□□□ -0.13
COL4A6-207ENST00000487645 SLC22A17Q8WUG5 538 aa14.22□□□□□ -0.13
COL4A6-207ENST00000487645 NAP1L5Q96NT1 182 aaPredicted RBP14.22□□□□□ -0.13
COL4A6-207ENST00000487645 ZCWPW1Q9H0M4 648 aa14.22□□□□□ -0.13
COL4A6-207ENST00000487645 SIX2Q9NPC8 291 aa14.22□□□□□ -0.13
COL4A6-207ENST00000487645 UBE2TQ9NPD8 197 aaPredicted RBP14.22□□□□□ -0.13
COL4A6-207ENST00000487645 CISHQ9NSE2 258 aa14.22□□□□□ -0.13
COL4A6-207ENST00000487645 DPP7Q9UHL4 492 aa14.22□□□□□ -0.13
COL4A6-207ENST00000487645 SIK3Q9Y2K2 1263 aa14.22□□□□□ -0.13
COL4A6-207ENST00000487645 DAAM1Q9Y4D1 1078 aa14.22□□□□□ -0.13
COL4A6-207ENST00000487645 PTPRDP23468 1912 aa14.21□□□□□ -0.13
COL4A6-207ENST00000487645 A8MXQ7 604 aa14.21□□□□□ -0.13
COL4A6-207ENST00000487645 PER2O15055 1255 aa14.21□□□□□ -0.13
COL4A6-207ENST00000487645 TEX33O43247 280 aa14.21□□□□□ -0.13
COL4A6-207ENST00000487645 TRIM21P19474 475 aaKnown RBP14.21□□□□□ -0.13
COL4A6-207ENST00000487645 RFX1P22670 979 aa14.21□□□□□ -0.13
COL4A6-207ENST00000487645 RAP1GAPP47736 663 aa14.21□□□□□ -0.13
COL4A6-207ENST00000487645 CLCN4P51793 760 aa14.21□□□□□ -0.13
COL4A6-207ENST00000487645 NDST1P52848 882 aa14.21□□□□□ -0.13
COL4A6-207ENST00000487645 HYAL1Q12794 435 aa14.21□□□□□ -0.13
COL4A6-207ENST00000487645 KCNC3Q14003 757 aa14.21□□□□□ -0.13
COL4A6-207ENST00000487645 MAPRE1Q15691 268 aaKnown RBP14.21□□□□□ -0.13
COL4A6-207ENST00000487645 KLHDC7AQ5VTJ3 777 aa14.21□□□□□ -0.13
COL4A6-207ENST00000487645 FAM171BQ6P995 826 aa14.21□□□□□ -0.13
COL4A6-207ENST00000487645 TMEM184AQ6ZMB5 413 aa14.21□□□□□ -0.13
COL4A6-207ENST00000487645 RTL10Q7L3V2 364 aa14.21□□□□□ -0.13
COL4A6-207ENST00000487645 RRAGAQ7L523 313 aa14.21□□□□□ -0.13
COL4A6-207ENST00000487645 RBM23Q86U06 439 aaKnown RBP14.21□□□□□ -0.13
COL4A6-207ENST00000487645 PALB2Q86YC2 1186 aa14.21□□□□□ -0.13
COL4A6-207ENST00000487645 ARHGEF19Q8IW93 802 aa14.21□□□□□ -0.13
COL4A6-207ENST00000487645 EFHBQ8N7U6 833 aa14.21□□□□□ -0.13
COL4A6-207ENST00000487645 OR10T2Q8NGX3 314 aa14.21□□□□□ -0.13
COL4A6-207ENST00000487645 C2orf15Q8WU43 125 aaKnown RBP14.21□□□□□ -0.13
COL4A6-207ENST00000487645 HDAC7Q8WUI4 952 aa14.21□□□□□ -0.13
COL4A6-207ENST00000487645 TNIP3Q96KP6 325 aa14.21□□□□□ -0.13
COL4A6-207ENST00000487645 A0A1W2PQC6 194 aa14.2□□□□□ -0.14
COL4A6-207ENST00000487645 CBFA2T2O43439 604 aa14.2□□□□□ -0.14
COL4A6-207ENST00000487645 TGM5O43548 720 aa14.2□□□□□ -0.14
COL4A6-207ENST00000487645 CILPO75339 1184 aa14.2□□□□□ -0.14
COL4A6-207ENST00000487645 TPM3P06753 285 aa14.2□□□□□ -0.14
COL4A6-207ENST00000487645 ATF2P15336 505 aa14.2□□□□□ -0.14
COL4A6-207ENST00000487645 PTPN1P18031 435 aaKnown RBP14.2□□□□□ -0.14
COL4A6-207ENST00000487645 ROR1Q01973 937 aa14.2□□□□□ -0.14
COL4A6-207ENST00000487645 ADAM15Q13444 863 aa14.2□□□□□ -0.14
COL4A6-207ENST00000487645 COL19A1Q14993 1142 aa14.2□□□□□ -0.14
COL4A6-207ENST00000487645 SYCP1Q15431 976 aa14.2□□□□□ -0.14
COL4A6-207ENST00000487645 NFE2Q16621 373 aaPredicted RBP14.2□□□□□ -0.14
COL4A6-207ENST00000487645 UVSSAQ2YD98 709 aa14.2□□□□□ -0.14
COL4A6-207ENST00000487645 INTS6LQ5JSJ4 861 aaKnown RBP14.2□□□□□ -0.14
COL4A6-207ENST00000487645 ELMSAN1Q6PJG2 1045 aa14.2□□□□□ -0.14
COL4A6-207ENST00000487645 LRRTM3Q86VH5 581 aa14.2□□□□□ -0.14
COL4A6-207ENST00000487645 UBR7Q8N806 425 aa14.2□□□□□ -0.14
COL4A6-207ENST00000487645 KREMEN1Q96MU8 473 aa14.2□□□□□ -0.14
COL4A6-207ENST00000487645 TMEM209Q96SK2 561 aa14.2□□□□□ -0.14
COL4A6-207ENST00000487645 PKMYT1Q99640 499 aa14.2□□□□□ -0.14
COL4A6-207ENST00000487645 ARID3AQ99856 593 aa14.2□□□□□ -0.14
COL4A6-207ENST00000487645 SYT15Q9BQS2 421 aa14.2□□□□□ -0.14
COL4A6-207ENST00000487645 LSM14BQ9BX40 385 aaKnown RBP14.2□□□□□ -0.14
COL4A6-207ENST00000487645 NT5C1AQ9BXI3 368 aa14.2□□□□□ -0.14
COL4A6-207ENST00000487645 PLEKHA4Q9H4M7 779 aa14.2□□□□□ -0.14
COL4A6-207ENST00000487645 IFNKQ9P0W0 207 aa14.2□□□□□ -0.14
COL4A6-207ENST00000487645 HSFX1Q9UBD0 423 aa14.2□□□□□ -0.14
COL4A6-207ENST00000487645 AFF4Q9UHB7 1163 aaKnown RBP14.2□□□□□ -0.14
COL4A6-207ENST00000487645 CNTN6Q9UQ52 1028 aa14.2□□□□□ -0.14
COL4A6-207ENST00000487645 NME7Q9Y5B8 376 aa14.2□□□□□ -0.14
COL4A6-207ENST00000487645 WDR27A2RRH5 827 aa14.19□□□□□ -0.14
COL4A6-207ENST00000487645 GLUD1P00367 558 aa14.19□□□□□ -0.14
COL4A6-207ENST00000487645 CPB1P15086 417 aa14.19□□□□□ -0.14
COL4A6-207ENST00000487645 UCHL3P15374 230 aa14.19□□□□□ -0.14
COL4A6-207ENST00000487645 CD58P19256 250 aa14.19□□□□□ -0.14
COL4A6-207ENST00000487645 ACO1P21399 889 aaKnown RBP14.19□□□□□ -0.14
COL4A6-207ENST00000487645 ACAT1P24752 427 aaKnown RBP14.19□□□□□ -0.14
COL4A6-207ENST00000487645 ARPP19P56211 112 aa14.19□□□□□ -0.14
COL4A6-207ENST00000487645 CTC1Q2NKJ3 1217 aa14.19□□□□□ -0.14
COL4A6-207ENST00000487645 SLC39A12Q504Y0 691 aa14.19□□□□□ -0.14
COL4A6-207ENST00000487645 SARM1Q6SZW1 724 aa14.19□□□□□ -0.14
COL4A6-207ENST00000487645 RNF19BQ6ZMZ0 732 aa14.19□□□□□ -0.14
COL4A6-207ENST00000487645 GLYCTKQ8IVS8 523 aa14.19□□□□□ -0.14
COL4A6-207ENST00000487645 B3GALNT2Q8NCR0 500 aa14.19□□□□□ -0.14
COL4A6-207ENST00000487645 NEK11Q8NG66 645 aa14.19□□□□□ -0.14
COL4A6-207ENST00000487645 MYCBPAPQ8TBZ2 947 aa14.19□□□□□ -0.14
COL4A6-207ENST00000487645 WHAMMQ8TF30 809 aa14.19□□□□□ -0.14
COL4A6-207ENST00000487645 TMEM176AQ96HP8 235 aa14.19□□□□□ -0.14
COL4A6-207ENST00000487645 PCMTD1Q96MG8 357 aaPredicted RBP14.19□□□□□ -0.14
COL4A6-207ENST00000487645 NAA15Q9BXJ9 866 aaKnown RBP14.19□□□□□ -0.14
COL4A6-207ENST00000487645 IGFLR1Q9H665 355 aa14.19□□□□□ -0.14
COL4A6-207ENST00000487645 DNAJC12Q9UKB3 198 aa14.19□□□□□ -0.14
COL4A6-207ENST00000487645 GTF3C4Q9UKN8 822 aa14.19□□□□□ -0.14
COL4A6-207ENST00000487645 KIAA1257Q9ULG3 409 aa14.19□□□□□ -0.14
COL4A6-207ENST00000487645 HCFC2Q9Y5Z7 792 aa14.19□□□□□ -0.14
COL4A6-207ENST00000487645 MYBPHLA2RUH7 354 aa14.18□□□□□ -0.14
COL4A6-207ENST00000487645 HCRTO43612 131 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms