RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 SHKBP1Q8TBC3 707 aa12.31□□□□□ -0.44
SPEN-205ENST00000487496 C2orf15Q8WU43 125 aaKnown RBP12.31□□□□□ -0.44
SPEN-205ENST00000487496 PSMG2Q969U7 264 aa12.31□□□□□ -0.44
SPEN-205ENST00000487496 HPDLQ96IR7 371 aa12.31□□□□□ -0.44
SPEN-205ENST00000487496 ZSWIM3Q96MP5 696 aa12.31□□□□□ -0.44
SPEN-205ENST00000487496 FNBP1Q96RU3 617 aa12.31□□□□□ -0.44
SPEN-205ENST00000487496 SEPT5Q99719 369 aaPredicted RBP12.31□□□□□ -0.44
SPEN-205ENST00000487496 ACBD6Q9BR61 282 aa12.31□□□□□ -0.44
SPEN-205ENST00000487496 PLA2G2FQ9BZM2 168 aa12.31□□□□□ -0.44
SPEN-205ENST00000487496 GZF1Q9H116 711 aaPredicted RBP12.31□□□□□ -0.44
SPEN-205ENST00000487496 GOLPH3LQ9H4A5 285 aa12.31□□□□□ -0.44
SPEN-205ENST00000487496 ARHGEF3Q9NR81 526 aa12.31□□□□□ -0.44
SPEN-205ENST00000487496 TMLHEQ9NVH6 421 aa12.31□□□□□ -0.44
SPEN-205ENST00000487496 DDX43Q9NXZ2 648 aaKnown RBP12.31□□□□□ -0.44
SPEN-205ENST00000487496 R3HCC1Q9Y3T6 440 aaKnown RBP12.31□□□□□ -0.44
SPEN-205ENST00000487496 ASB3Q9Y575 518 aa12.31□□□□□ -0.44
SPEN-205ENST00000487496 TSC2P49815 1807 aa12.31□□□□□ -0.44
SPEN-205ENST00000487496 KMT2EQ8IZD2 1858 aa12.31□□□□□ -0.44
SPEN-205ENST00000487496 GABRDO14764 452 aa12.3□□□□□ -0.44
SPEN-205ENST00000487496 EXOC3O60645 756 aa12.3□□□□□ -0.44
SPEN-205ENST00000487496 PRPF40AO75400 957 aaKnown RBP12.3□□□□□ -0.44
SPEN-205ENST00000487496 ZNF202O95125 648 aa12.3□□□□□ -0.44
SPEN-205ENST00000487496 CST3P01034 146 aaPredicted RBP12.3□□□□□ -0.44
SPEN-205ENST00000487496 RPN1P04843 607 aaKnown RBP12.3□□□□□ -0.44
SPEN-205ENST00000487496 ATF6P18850 670 aa12.3□□□□□ -0.44
SPEN-205ENST00000487496 FCARP24071 287 aa12.3□□□□□ -0.44
SPEN-205ENST00000487496 NUCB2P80303 420 aa12.3□□□□□ -0.44
SPEN-205ENST00000487496 MYL7Q01449 175 aa12.3□□□□□ -0.44
SPEN-205ENST00000487496 TSPY1Q01534 308 aa12.3□□□□□ -0.44
SPEN-205ENST00000487496 SOWAHAQ2M3V2 549 aa12.3□□□□□ -0.44
SPEN-205ENST00000487496 KRBA2Q6ZNG9 492 aa12.3□□□□□ -0.44
SPEN-205ENST00000487496 DPH6Q7L8W6 267 aa12.3□□□□□ -0.44
SPEN-205ENST00000487496 ITIH5Q86UX2 942 aa12.3□□□□□ -0.44
SPEN-205ENST00000487496 ADGRF2Q8IZF7 708 aa12.3□□□□□ -0.44
SPEN-205ENST00000487496 SPATA18Q8TC71 538 aa12.3□□□□□ -0.44
SPEN-205ENST00000487496 FAM200AQ8TCP9 573 aa12.3□□□□□ -0.44
SPEN-205ENST00000487496 SPPL2BQ8TCT7 592 aa12.3□□□□□ -0.44
SPEN-205ENST00000487496 TMEM174Q8WUU8 243 aa12.3□□□□□ -0.44
SPEN-205ENST00000487496 ZNF516Q92618 1163 aa12.3□□□□□ -0.44
SPEN-205ENST00000487496 ELSPBP1Q96BH3 223 aa12.3□□□□□ -0.44
SPEN-205ENST00000487496 ASB16Q96NS5 453 aa12.3□□□□□ -0.44
SPEN-205ENST00000487496 CGRRF1Q99675 332 aa12.3□□□□□ -0.44
SPEN-205ENST00000487496 LPIN3Q9BQK8 851 aa12.3□□□□□ -0.44
SPEN-205ENST00000487496 KCTD10Q9H3F6 313 aa12.3□□□□□ -0.44
SPEN-205ENST00000487496 TBC1D17Q9HA65 648 aa12.3□□□□□ -0.44
SPEN-205ENST00000487496 ZFP14Q9HCL3 533 aa12.3□□□□□ -0.44
SPEN-205ENST00000487496 ZNF334Q9HCZ1 680 aaPredicted RBP12.3□□□□□ -0.44
SPEN-205ENST00000487496 ABI2Q9NYB9 513 aaPredicted RBP12.3□□□□□ -0.44
SPEN-205ENST00000487496 A0A1W2PRU2 124 aa12.29□□□□□ -0.44
SPEN-205ENST00000487496 STK25O00506 426 aa12.29□□□□□ -0.44
SPEN-205ENST00000487496 PDXKO00764 312 aa12.29□□□□□ -0.44
SPEN-205ENST00000487496 GALR2O43603 387 aaPredicted RBP12.29□□□□□ -0.44
SPEN-205ENST00000487496 HAPLN1P10915 354 aaPredicted RBP12.29□□□□□ -0.44
SPEN-205ENST00000487496 ACAT1P24752 427 aaKnown RBP12.29□□□□□ -0.44
SPEN-205ENST00000487496 LHX1P48742 406 aa12.29□□□□□ -0.44
SPEN-205ENST00000487496 PFKPQ01813 784 aa12.29□□□□□ -0.44
SPEN-205ENST00000487496 DPYDQ12882 1025 aa12.29□□□□□ -0.44
SPEN-205ENST00000487496 SNW1Q13573 536 aaKnown RBP12.29□□□□□ -0.44
SPEN-205ENST00000487496 NFE2Q16621 373 aaPredicted RBP12.29□□□□□ -0.44
SPEN-205ENST00000487496 SLC44A4Q53GD3 710 aa12.29□□□□□ -0.44
SPEN-205ENST00000487496 INTS6LQ5JSJ4 861 aaKnown RBP12.29□□□□□ -0.44
SPEN-205ENST00000487496 PHLDB3Q6NSJ2 640 aa12.29□□□□□ -0.44
SPEN-205ENST00000487496 GAREM2Q75VX8 874 aa12.29□□□□□ -0.44
SPEN-205ENST00000487496 LIMS2Q7Z4I7 341 aa12.29□□□□□ -0.44
SPEN-205ENST00000487496 SLC9A9Q8IVB4 645 aa12.29□□□□□ -0.44
SPEN-205ENST00000487496 ZSCAN18Q8TBC5 510 aaPredicted RBP12.29□□□□□ -0.44
SPEN-205ENST00000487496 SMARCD2Q92925 531 aa12.29□□□□□ -0.44
SPEN-205ENST00000487496 PKMYT1Q99640 499 aa12.29□□□□□ -0.44
SPEN-205ENST00000487496 GPR88Q9GZN0 384 aa12.29□□□□□ -0.44
SPEN-205ENST00000487496 DMAC2Q9NW81 257 aa12.29□□□□□ -0.44
SPEN-205ENST00000487496 GTF3C4Q9UKN8 822 aa12.29□□□□□ -0.44
SPEN-205ENST00000487496 PCDHB5Q9Y5E4 795 aa12.29□□□□□ -0.44
SPEN-205ENST00000487496 MYBPHLA2RUH7 354 aa12.28□□□□□ -0.44
SPEN-205ENST00000487496 HCRTO43612 131 aa12.28□□□□□ -0.44
SPEN-205ENST00000487496 RHOBTB3O94955 611 aa12.28□□□□□ -0.44
SPEN-205ENST00000487496 FGF19O95750 216 aa12.28□□□□□ -0.44
SPEN-205ENST00000487496 RFX1P22670 979 aa12.28□□□□□ -0.44
SPEN-205ENST00000487496 GABRR2P28476 465 aa12.28□□□□□ -0.44
SPEN-205ENST00000487496 HOXD11P31277 338 aaPredicted RBP12.28□□□□□ -0.44
SPEN-205ENST00000487496 VIPR2P41587 438 aa12.28□□□□□ -0.44
SPEN-205ENST00000487496 CASP4P49662 377 aa12.28□□□□□ -0.44
SPEN-205ENST00000487496 STARD6P59095 220 aa12.28□□□□□ -0.44
SPEN-205ENST00000487496 VEPH1Q14D04 833 aa12.28□□□□□ -0.44
SPEN-205ENST00000487496 STXBP5Q5T5C0 1151 aa12.28□□□□□ -0.44
SPEN-205ENST00000487496 PLEKHO2Q8TD55 490 aa12.28□□□□□ -0.44
SPEN-205ENST00000487496 GIPC2Q8TF65 315 aa12.28□□□□□ -0.44
SPEN-205ENST00000487496 KBTBD7Q8WVZ9 684 aa12.28□□□□□ -0.44
SPEN-205ENST00000487496 CCDC47Q96A33 483 aaKnown RBP12.28□□□□□ -0.44
SPEN-205ENST00000487496 SHDQ96IW2 340 aa12.28□□□□□ -0.44
SPEN-205ENST00000487496 PI4K2AQ9BTU6 479 aa12.28□□□□□ -0.44
SPEN-205ENST00000487496 ATXN3LQ9H3M9 355 aa12.28□□□□□ -0.44
SPEN-205ENST00000487496 TRPV4Q9HBA0 871 aa12.28□□□□□ -0.44
SPEN-205ENST00000487496 TCHHQ07283 1943 aa12.28□□□□□ -0.44
SPEN-205ENST00000487496 H0Y858 1186 aa12.27□□□□□ -0.45
SPEN-205ENST00000487496 KIF20AO95235 890 aa12.27□□□□□ -0.45
SPEN-205ENST00000487496 NR3C1P04150 777 aa12.27□□□□□ -0.45
SPEN-205ENST00000487496 ATXN8OSP0DMR3 200 aa12.27□□□□□ -0.45
SPEN-205ENST00000487496 PSMC3P17980 439 aa12.27□□□□□ -0.45
SPEN-205ENST00000487496 LMO2P25791 158 aa12.27□□□□□ -0.45
SPEN-205ENST00000487496 PCSK1P29120 753 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms