RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 BLOC1S6Q9UL45 172 aa15.35■□□□□ 0.05
EPHB4-206ENST00000487222 FARP1Q9Y4F1 1045 aaPredicted RBP15.35■□□□□ 0.05
EPHB4-206ENST00000487222 TRAPPC3O43617 180 aa15.35■□□□□ 0.05
EPHB4-206ENST00000487222 MUTP22033 750 aa15.35■□□□□ 0.05
EPHB4-206ENST00000487222 KCNA4P22459 653 aa15.35■□□□□ 0.05
EPHB4-206ENST00000487222 NEK2P51955 445 aa15.35■□□□□ 0.05
EPHB4-206ENST00000487222 CUL2Q13617 745 aa15.35■□□□□ 0.05
EPHB4-206ENST00000487222 PTK2BQ14289 1009 aa15.35■□□□□ 0.05
EPHB4-206ENST00000487222 LRRC8BQ6P9F7 803 aa15.35■□□□□ 0.05
EPHB4-206ENST00000487222 USP33Q8TEY7 942 aa15.35■□□□□ 0.05
EPHB4-206ENST00000487222 ELP3Q9H9T3 547 aa15.35■□□□□ 0.05
EPHB4-206ENST00000487222 PDGFRBP09619 1106 aa15.34■□□□□ 0.05
EPHB4-206ENST00000487222 GZMAP12544 262 aa15.34■□□□□ 0.05
EPHB4-206ENST00000487222 GRIK1P39086 918 aa15.34■□□□□ 0.05
EPHB4-206ENST00000487222 MTM1Q13496 603 aa15.34■□□□□ 0.05
EPHB4-206ENST00000487222 ZC3H12BQ5HYM0 836 aaKnown RBP15.34■□□□□ 0.05
EPHB4-206ENST00000487222 EFHC1Q5JVL4 640 aa15.34■□□□□ 0.05
EPHB4-206ENST00000487222 LRRC6Q86X45 466 aa15.34■□□□□ 0.05
EPHB4-206ENST00000487222 ZNF555Q8NEP9 628 aa15.34■□□□□ 0.05
EPHB4-206ENST00000487222 SEMA6BQ9H3T3 888 aa15.34■□□□□ 0.05
EPHB4-206ENST00000487222 WHRNQ9P202 907 aa15.34■□□□□ 0.05
EPHB4-206ENST00000487222 TSR3Q9UJK0 312 aaKnown RBP15.34■□□□□ 0.05
EPHB4-206ENST00000487222 AP5Z1O43299 807 aa15.34■□□□□ 0.05
EPHB4-206ENST00000487222 HNRNPCP07910 306 aaKnown RBP eCLIP15.34■□□□□ 0.05
EPHB4-206ENST00000487222 RARBP10826 455 aa15.34■□□□□ 0.05
EPHB4-206ENST00000487222 MAP4P27816 1152 aaKnown RBP15.34■□□□□ 0.05
EPHB4-206ENST00000487222 VEPH1Q14D04 833 aa15.34■□□□□ 0.05
EPHB4-206ENST00000487222 DDX50Q9BQ39 737 aaKnown RBP15.34■□□□□ 0.05
EPHB4-206ENST00000487222 FAM49BQ9NUQ9 324 aa15.34■□□□□ 0.05
EPHB4-206ENST00000487222 hCG_2014768A0A024R1R8 64 aa15.34■□□□□ 0.05
EPHB4-206ENST00000487222 CCDC78A2IDD5 438 aa15.34■□□□□ 0.05
EPHB4-206ENST00000487222 HSPA1AP0DMV8 641 aaKnown RBP15.34■□□□□ 0.05
EPHB4-206ENST00000487222 HSPA1BP0DMV9 641 aaKnown RBP15.34■□□□□ 0.05
EPHB4-206ENST00000487222 CTCFP49711 727 aaPredicted RBP15.34■□□□□ 0.05
EPHB4-206ENST00000487222 MFSD14CQ5VZR4 134 aa15.34■□□□□ 0.05
EPHB4-206ENST00000487222 OR6J1Q8NGC5 347 aa15.34■□□□□ 0.05
EPHB4-206ENST00000487222 AGXT2Q9BYV1 514 aa15.34■□□□□ 0.05
EPHB4-206ENST00000487222 METTL5Q9NRN9 209 aaKnown RBP15.34■□□□□ 0.05
EPHB4-206ENST00000487222 MAP3K20Q9NYL2 800 aaKnown RBP15.34■□□□□ 0.05
EPHB4-206ENST00000487222 PHTF1Q9UMS5 762 aa15.34■□□□□ 0.05
EPHB4-206ENST00000487222 A0A0A6YYK5 440 aaPredicted RBP15.34■□□□□ 0.05
EPHB4-206ENST00000487222 LOC100653049A0A140TA62 436 aa15.34■□□□□ 0.05
EPHB4-206ENST00000487222 SUPT3HO75486 399 aa15.34■□□□□ 0.05
EPHB4-206ENST00000487222 KRT34O76011 436 aa15.34■□□□□ 0.05
EPHB4-206ENST00000487222 ACADSP16219 412 aa15.34■□□□□ 0.05
EPHB4-206ENST00000487222 BRD2P25440 801 aaKnown RBP15.34■□□□□ 0.05
EPHB4-206ENST00000487222 DCAF4L1Q3SXM0 396 aa15.34■□□□□ 0.05
EPHB4-206ENST00000487222 MROH9Q5TGP6 573 aa15.34■□□□□ 0.05
EPHB4-206ENST00000487222 INTS5Q6P9B9 1019 aaKnown RBP15.34■□□□□ 0.05
EPHB4-206ENST00000487222 NUP93Q8N1F7 819 aa15.34■□□□□ 0.05
EPHB4-206ENST00000487222 C1orf131Q8NDD1 294 aaKnown RBP15.34■□□□□ 0.05
EPHB4-206ENST00000487222 EPS8L3Q8TE67 593 aaKnown RBP15.34■□□□□ 0.05
EPHB4-206ENST00000487222 MOSPD1Q9UJG1 213 aa15.34■□□□□ 0.05
EPHB4-206ENST00000487222 GTPBP10A4D1E9 387 aaKnown RBP15.33■□□□□ 0.05
EPHB4-206ENST00000487222 MED24O75448 989 aa15.33■□□□□ 0.05
EPHB4-206ENST00000487222 NDUFS3O75489 264 aa15.33■□□□□ 0.05
EPHB4-206ENST00000487222 DDX5P17844 614 aaKnown RBP15.33■□□□□ 0.05
EPHB4-206ENST00000487222 RANBP1P43487 201 aa15.33■□□□□ 0.05
EPHB4-206ENST00000487222 CACNB2Q08289 660 aaPredicted RBP15.33■□□□□ 0.05
EPHB4-206ENST00000487222 ACCSLQ4AC99 568 aa15.33■□□□□ 0.05
EPHB4-206ENST00000487222 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.33■□□□□ 0.05
EPHB4-206ENST00000487222 SALL3Q9BXA9 1300 aa15.33■□□□□ 0.04
EPHB4-206ENST00000487222 DEAF1O75398 565 aaPredicted RBP15.33■□□□□ 0.04
EPHB4-206ENST00000487222 NAPEPLDQ6IQ20 393 aa15.33■□□□□ 0.04
EPHB4-206ENST00000487222 RRM2BQ7LG56 351 aa15.33■□□□□ 0.04
EPHB4-206ENST00000487222 IFNEQ86WN2 208 aa15.33■□□□□ 0.04
EPHB4-206ENST00000487222 ZNF669Q96BR6 464 aaPredicted RBP15.33■□□□□ 0.04
EPHB4-206ENST00000487222 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.33■□□□□ 0.041e-8■■□□□ 12.8
EPHB4-206ENST00000487222 ARHGAP20Q9P2F6 1191 aa15.33■□□□□ 0.04
EPHB4-206ENST00000487222 ENO4A6NNW6 628 aa15.33■□□□□ 0.04
EPHB4-206ENST00000487222 HIST1H2AGP0C0S8 130 aaPredicted RBP15.33■□□□□ 0.04
EPHB4-206ENST00000487222 HIST1H2ADP20671 130 aa15.33■□□□□ 0.04
EPHB4-206ENST00000487222 PTGER2P43116 358 aa15.33■□□□□ 0.04
EPHB4-206ENST00000487222 CAVIN3Q969G5 261 aa15.33■□□□□ 0.04
EPHB4-206ENST00000487222 GPRASP2Q96D09 838 aa15.33■□□□□ 0.04
EPHB4-206ENST00000487222 PABPC5Q96DU9 382 aaKnown RBP15.33■□□□□ 0.04
EPHB4-206ENST00000487222 HIST1H2AHQ96KK5 128 aa15.33■□□□□ 0.04
EPHB4-206ENST00000487222 MAGEB18Q96M61 343 aa15.33■□□□□ 0.04
EPHB4-206ENST00000487222 HIST1H2AJQ99878 128 aa15.33■□□□□ 0.04
EPHB4-206ENST00000487222 H2AFJQ9BTM1 129 aa15.33■□□□□ 0.04
EPHB4-206ENST00000487222 PACSIN1Q9BY11 444 aa15.33■□□□□ 0.04
EPHB4-206ENST00000487222 ZNF711Q9Y462 761 aa15.33■□□□□ 0.04
EPHB4-206ENST00000487222 LOC102724159A0A0B4J2E5 919 aa15.33■□□□□ 0.04
EPHB4-206ENST00000487222 COPAP53621 1224 aa15.33■□□□□ 0.04
EPHB4-206ENST00000487222 PWP2Q15269 919 aaKnown RBP15.33■□□□□ 0.04
EPHB4-206ENST00000487222 CLEC4FQ8N1N0 589 aa15.33■□□□□ 0.04
EPHB4-206ENST00000487222 ATP8B4Q8TF62 1192 aa15.33■□□□□ 0.04
EPHB4-206ENST00000487222 ARHGEF9O43307 516 aa15.32■□□□□ 0.04
EPHB4-206ENST00000487222 ZC3H11AO75152 810 aaKnown RBP eCLIP15.32■□□□□ 0.04
EPHB4-206ENST00000487222 SGPL1O95470 568 aa15.32■□□□□ 0.04
EPHB4-206ENST00000487222 GH1P01241 217 aa15.32■□□□□ 0.04
EPHB4-206ENST00000487222 ATXN8OSP0DMR3 200 aa15.32■□□□□ 0.04
EPHB4-206ENST00000487222 CYP2C8P10632 490 aa15.32■□□□□ 0.04
EPHB4-206ENST00000487222 SEC23AQ15436 765 aa15.32■□□□□ 0.04
EPHB4-206ENST00000487222 NTRK3Q16288 839 aa15.32■□□□□ 0.04
EPHB4-206ENST00000487222 THEMIS2Q5TEJ8 643 aa15.32■□□□□ 0.04
EPHB4-206ENST00000487222 EFHBQ8N7U6 833 aa15.32■□□□□ 0.04
EPHB4-206ENST00000487222 SHCBP1Q8NEM2 672 aa15.32■□□□□ 0.04
EPHB4-206ENST00000487222 FAM111AQ96PZ2 611 aa15.32■□□□□ 0.04
EPHB4-206ENST00000487222 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms