RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 ZDHHC8Q9ULC8 765 aa4.78□□□□□ -1.64
PTCD3-216ENST00000487043 MED16Q9Y2X0 877 aa4.78□□□□□ -1.64
PTCD3-216ENST00000487043 PTPRTO14522 1441 aa4.78□□□□□ -1.64
PTCD3-216ENST00000487043 ARHGEF40Q8TER5 1519 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 E9PCH4 1651 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 TRIM43BA6NCK2 446 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 PRSS29PA6NIE9 313 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 CXorf49A8MYA2 514 aaPredicted RBP4.77□□□□□ -1.65
PTCD3-216ENST00000487043 FFAR3O14843 346 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 TLR5O60602 858 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 ABHD16AO95870 558 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 CSTBP04080 98 aaKnown RBP4.77□□□□□ -1.65
PTCD3-216ENST00000487043 THP07101 528 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 GJB1P08034 283 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 CD53P19397 219 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 ALDH9A1P49189 494 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 GZMKP49863 264 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 SLURP1P55000 103 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 NPEPPSP55786 919 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 PSMC1P62191 440 aaKnown RBP4.77□□□□□ -1.65
PTCD3-216ENST00000487043 ADAM8P78325 824 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 HTRA4P83105 476 aaPredicted RBP4.77□□□□□ -1.65
PTCD3-216ENST00000487043 DLX2Q07687 328 aaPredicted RBP4.77□□□□□ -1.65
PTCD3-216ENST00000487043 EFEMP1Q12805 493 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 CTBP1Q13363 440 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 PUM1Q14671 1186 aaKnown RBP eCLIP4.77□□□□□ -1.659e-7■□□□□ 9.3
PTCD3-216ENST00000487043 GAGE13Q4V321 117 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 SLC44A4Q53GD3 710 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 ALFQ53S48 1182 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 ZFYVE27Q5T4F4 411 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 RRAGBQ5VZM2 374 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 OTUD7BQ6GQQ9 843 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 ZNF529Q6P280 563 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 UBE3BQ7Z3V4 1068 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 ADGRG2Q8IZP9 1017 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 KLHL36Q8N4N3 616 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 TXNDC5Q8NBS9 432 aaKnown RBP4.77□□□□□ -1.65
PTCD3-216ENST00000487043 IL17RDQ8NFM7 739 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 MUL1Q969V5 352 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 TRIM43Q96BQ3 446 aaPredicted RBP4.77□□□□□ -1.65
PTCD3-216ENST00000487043 GPHA2Q96T91 129 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 GPR20Q99678 358 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 EPC1Q9H2F5 836 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 SMURF2Q9HAU4 748 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 AGO4Q9HCK5 861 aaKnown RBP4.77□□□□□ -1.65
PTCD3-216ENST00000487043 SERHLQ9NQF3 203 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 C9orf78Q9NZ63 289 aaPredicted RBP4.77□□□□□ -1.65
PTCD3-216ENST00000487043 MYO1AQ9UBC5 1043 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 ADAM29Q9UKF5 820 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 ITGB1BP2Q9UKP3 347 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 NR2E1Q9Y466 385 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 ARHGAP31Q2M1Z3 1444 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 ABCC3O15438 1527 aa4.77□□□□□ -1.65
PTCD3-216ENST00000487043 A0A1B0GTL3 188 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 CCDC144AA2RUR9 1427 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 TMEM233B4DJY2 109 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 K7ESM1 405 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 ARHGAP6O43182 974 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 THAP12O43422 761 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 PRICKLE3O43900 615 aaPredicted RBP4.76□□□□□ -1.65
PTCD3-216ENST00000487043 PLA2G6O60733 806 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 SLC43A1O75387 559 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 SKAP2O75563 359 aaPredicted RBP4.76□□□□□ -1.65
PTCD3-216ENST00000487043 MT-ND5P03915 603 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 GNAI2P04899 355 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 ANXA2P07355 339 aaKnown RBP4.76□□□□□ -1.65
PTCD3-216ENST00000487043 MYL4P12829 197 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 CCT5P48643 541 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 RAP2BP61225 183 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 HGFACQ04756 655 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 RAB32Q13637 225 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 KIF22Q14807 665 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 VWA3BQ502W6 1294 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 PRR16Q569H4 304 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 LMBRD2Q68DH5 695 aaPredicted RBP4.76□□□□□ -1.65
PTCD3-216ENST00000487043 SEM1Q6ZVN7 128 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 UNC13DQ70J99 1090 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 RNF44Q7L0R7 432 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 BEND5Q7L4P6 421 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 RALYLQ86SE5 291 aaKnown RBP4.76□□□□□ -1.65
PTCD3-216ENST00000487043 MICU3Q86XE3 530 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 ATG16L2Q8NAA4 619 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 SLC35B2Q8TB61 432 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 C18orf8Q96DM3 657 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 LTV1Q96GA3 475 aaPredicted RBP4.76□□□□□ -1.65
PTCD3-216ENST00000487043 DPH1Q9BZG8 443 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 ZNF518BQ9C0D4 1074 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 KCNH6Q9H252 994 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 JADE2Q9NQC1 790 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 TBC1D23Q9NUY8 699 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 CFAP97Q9P2B7 532 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 SLC39A10Q9ULF5 831 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 SLC45A2Q9UMX9 530 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 LZTS1Q9Y250 596 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 MAN2B2Q9Y2E5 1009 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 ZC3H13Q5T200 1668 aaKnown RBP4.76□□□□□ -1.65
PTCD3-216ENST00000487043 EFCAB6Q5THR3 1501 aa4.76□□□□□ -1.65
PTCD3-216ENST00000487043 CEP152O94986 1710 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 SIGLEC1Q9BZZ2 1709 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 NPATQ14207 1427 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms