RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 ALOXE3Q9BYJ1 711 aa4.42□□□□□ -1.7
SNRNP27-204ENST00000487029 C11orf54Q9H0W9 315 aaPredicted RBP4.42□□□□□ -1.7
SNRNP27-204ENST00000487029 BHMT2Q9H2M3 363 aa4.42□□□□□ -1.7
SNRNP27-204ENST00000487029 ASB6Q9NWX5 421 aa4.42□□□□□ -1.7
SNRNP27-204ENST00000487029 RUVBL1Q9Y265 456 aaKnown RBP4.42□□□□□ -1.7
SNRNP27-204ENST00000487029 CFAP69A5D8W1 941 aa4.41□□□□□ -1.7
SNRNP27-204ENST00000487029 NT5C1B-RDH14C9J2C7 533 aa4.41□□□□□ -1.7
SNRNP27-204ENST00000487029 FRS3O43559 492 aa4.41□□□□□ -1.7
SNRNP27-204ENST00000487029 MGEA5O60502 916 aa4.41□□□□□ -1.7
SNRNP27-204ENST00000487029 CD1AP06126 327 aa4.41□□□□□ -1.7
SNRNP27-204ENST00000487029 IFIT2P09913 472 aaKnown RBP4.41□□□□□ -1.7
SNRNP27-204ENST00000487029 RAP2AP10114 183 aa4.41□□□□□ -1.7
SNRNP27-204ENST00000487029 PEX2P28328 305 aa4.41□□□□□ -1.7
SNRNP27-204ENST00000487029 NEK3P51956 506 aa4.41□□□□□ -1.7
SNRNP27-204ENST00000487029 CREMQ03060 361 aa4.41□□□□□ -1.7
SNRNP27-204ENST00000487029 BIRC2Q13490 618 aa4.41□□□□□ -1.7
SNRNP27-204ENST00000487029 FLYWCH1Q4VC44 716 aa4.41□□□□□ -1.7
SNRNP27-204ENST00000487029 OTUD7BQ6GQQ9 843 aa4.41□□□□□ -1.7
SNRNP27-204ENST00000487029 MAPKAPK5Q8IW41 473 aa4.41□□□□□ -1.7
SNRNP27-204ENST00000487029 DCBLD1Q8N8Z6 715 aa4.41□□□□□ -1.7
SNRNP27-204ENST00000487029 PMM1Q92871 262 aa4.41□□□□□ -1.7
SNRNP27-204ENST00000487029 FUBP1Q96AE4 644 aaKnown RBP4.41□□□□□ -1.7
SNRNP27-204ENST00000487029 SLC39A13Q96H72 371 aa4.41□□□□□ -1.7
SNRNP27-204ENST00000487029 RPS6KC1Q96S38 1066 aa4.41□□□□□ -1.7
SNRNP27-204ENST00000487029 ZSWIM1Q9BR11 485 aa4.41□□□□□ -1.7
SNRNP27-204ENST00000487029 KLHL11Q9NVR0 708 aa4.41□□□□□ -1.7
SNRNP27-204ENST00000487029 ARPP21Q9UBL0 812 aaPredicted RBP4.41□□□□□ -1.7
SNRNP27-204ENST00000487029 PCDHGB6Q9Y5F9 930 aa4.41□□□□□ -1.7
SNRNP27-204ENST00000487029 A0A1W2PPL8 197 aa4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 CXorf49A8MYA2 514 aaPredicted RBP4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 F2RL2O00254 374 aa4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 PJA2O43164 708 aa4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 PHGDHO43175 533 aaKnown RBP4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 PQBP1O60828 265 aaKnown RBP4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 PROP1O75360 226 aa4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 SNRPA1P09661 255 aaKnown RBP4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 SLC5A1P13866 664 aa4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 ATP5JP18859 108 aa4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 PRDX5P30044 214 aa4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 OS9Q13438 667 aaPredicted RBP4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 POLD3Q15054 466 aaPredicted RBP4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 PABPC1LQ4VXU2 614 aaKnown RBP4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 DACT2Q5SW24 774 aa4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 APOA5Q6Q788 366 aa4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 SEM1Q6ZVN7 128 aa4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 COL23A1Q86Y22 540 aaPredicted RBP4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 KRT78Q8N1N4 520 aa4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 BRIX1Q8TDN6 353 aaKnown RBP4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 DPF1Q92782 380 aa4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 NACC2Q96BF6 587 aa4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 NT5C1BQ96P26 610 aa4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 STRBPQ96SI9 672 aaKnown RBP4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 MPHOSPH6Q99547 160 aaKnown RBP4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 MRI1Q9BV20 369 aa4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 C22orf23Q9BZE7 217 aa4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 NUP62CLQ9H1M0 184 aa4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 ZMAT3Q9HA38 289 aaKnown RBP4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 ATP6V0A4Q9HBG4 840 aa4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 SARS2Q9NP81 518 aaKnown RBP4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 CNNM1Q9NRU3 951 aa4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 GNL3LQ9NVN8 582 aaKnown RBP4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 SIDT1Q9NXL6 827 aaKnown RBP4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 STAP2Q9UGK3 403 aa4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 ATP11BQ9Y2G3 1177 aa4.4□□□□□ -1.71
SNRNP27-204ENST00000487029 GRM6O15303 877 aa4.39□□□□□ -1.71
SNRNP27-204ENST00000487029 MTHFD1P11586 935 aaKnown RBP4.39□□□□□ -1.71
SNRNP27-204ENST00000487029 MYF5P13349 255 aa4.39□□□□□ -1.71
SNRNP27-204ENST00000487029 CLRN1P58418 232 aa4.39□□□□□ -1.71
SNRNP27-204ENST00000487029 MRPS35P82673 323 aaKnown RBP4.39□□□□□ -1.71
SNRNP27-204ENST00000487029 TSHZ3Q63HK5 1081 aa4.39□□□□□ -1.71
SNRNP27-204ENST00000487029 ARMC6Q6NXE6 501 aa4.39□□□□□ -1.71
SNRNP27-204ENST00000487029 FAM90A1Q86YD7 464 aa4.39□□□□□ -1.71
SNRNP27-204ENST00000487029 RHOT2Q8IXI1 618 aa4.39□□□□□ -1.71
SNRNP27-204ENST00000487029 APIPQ96GX9 242 aa4.39□□□□□ -1.71
SNRNP27-204ENST00000487029 ELAC2Q9BQ52 826 aaKnown RBP4.39□□□□□ -1.71
SNRNP27-204ENST00000487029 BRIP1Q9BX63 1249 aa4.39□□□□□ -1.71
SNRNP27-204ENST00000487029 NAA15Q9BXJ9 866 aaKnown RBP4.39□□□□□ -1.71
SNRNP27-204ENST00000487029 LRRC27Q9C0I9 530 aa4.39□□□□□ -1.71
SNRNP27-204ENST00000487029 MRPL46Q9H2W6 279 aaKnown RBP4.39□□□□□ -1.71
SNRNP27-204ENST00000487029 CASS4Q9NQ75 786 aa4.39□□□□□ -1.71
SNRNP27-204ENST00000487029 SLC23A1Q9UHI7 598 aa4.39□□□□□ -1.71
SNRNP27-204ENST00000487029 CPA4Q9UI42 421 aa4.39□□□□□ -1.71
SNRNP27-204ENST00000487029 TPCN1Q9ULQ1 816 aa4.39□□□□□ -1.71
SNRNP27-204ENST00000487029 PHTF1Q9UMS5 762 aa4.39□□□□□ -1.71
SNRNP27-204ENST00000487029 PCDHA1Q9Y5I3 950 aa4.39□□□□□ -1.71
SNRNP27-204ENST00000487029 COMMD10Q9Y6G5 202 aa4.39□□□□□ -1.71
SNRNP27-204ENST00000487029 PNPLA7Q6ZV29 1317 aa4.39□□□□□ -1.71
SNRNP27-204ENST00000487029 ZFPL1O95159 310 aa4.38□□□□□ -1.71
SNRNP27-204ENST00000487029 PIK3CGP48736 1102 aa4.38□□□□□ -1.71
SNRNP27-204ENST00000487029 AK2P54819 239 aa4.38□□□□□ -1.71
SNRNP27-204ENST00000487029 KHDC1LQ5JSQ8 128 aa4.38□□□□□ -1.71
SNRNP27-204ENST00000487029 ZNF529Q6P280 563 aa4.38□□□□□ -1.71
SNRNP27-204ENST00000487029 PPP1R3BQ86XI6 285 aa4.38□□□□□ -1.71
SNRNP27-204ENST00000487029 IL17RDQ8NFM7 739 aa4.38□□□□□ -1.71
SNRNP27-204ENST00000487029 NLGN4YQ8NFZ3 816 aaPredicted RBP4.38□□□□□ -1.71
SNRNP27-204ENST00000487029 ZFP28Q8NHY6 868 aa4.38□□□□□ -1.71
SNRNP27-204ENST00000487029 IL31RAQ8NI17 732 aa4.38□□□□□ -1.71
SNRNP27-204ENST00000487029 ACTRT2Q8TDY3 377 aa4.38□□□□□ -1.71
SNRNP27-204ENST00000487029 ZBTB9Q96C00 473 aa4.38□□□□□ -1.71
SNRNP27-204ENST00000487029 PSMD1Q99460 953 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms