RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 MYL1P05976 194 aa19.79■□□□□ 0.76
PRPF40A-209ENST00000486100 HAPLN1P10915 354 aaPredicted RBP19.79■□□□□ 0.76
PRPF40A-209ENST00000486100 CYP2J2P51589 502 aa19.79■□□□□ 0.76
PRPF40A-209ENST00000486100 TSPY1Q01534 308 aa19.79■□□□□ 0.76
PRPF40A-209ENST00000486100 PRKCQQ04759 706 aa19.79■□□□□ 0.76
PRPF40A-209ENST00000486100 STK4Q13043 487 aa19.79■□□□□ 0.76
PRPF40A-209ENST00000486100 SNW1Q13573 536 aaKnown RBP19.79■□□□□ 0.76
PRPF40A-209ENST00000486100 KMT5BQ4FZB7 885 aa19.79■□□□□ 0.76
PRPF40A-209ENST00000486100 DPH6Q7L8W6 267 aa19.79■□□□□ 0.76
PRPF40A-209ENST00000486100 CCDC105Q8IYK2 499 aa19.79■□□□□ 0.76
PRPF40A-209ENST00000486100 TOP6BLQ8N6T0 577 aa19.79■□□□□ 0.76
PRPF40A-209ENST00000486100 ATOH1Q92858 354 aaPredicted RBP19.79■□□□□ 0.76
PRPF40A-209ENST00000486100 FNBP1Q96RU3 617 aa19.79■□□□□ 0.76
PRPF40A-209ENST00000486100 TRPV4Q9HBA0 871 aa19.79■□□□□ 0.76
PRPF40A-209ENST00000486100 EXOC1Q9NV70 894 aa19.79■□□□□ 0.76
PRPF40A-209ENST00000486100 DDX43Q9NXZ2 648 aaKnown RBP19.79■□□□□ 0.76
PRPF40A-209ENST00000486100 PCDHB5Q9Y5E4 795 aa19.79■□□□□ 0.76
PRPF40A-209ENST00000486100 ANK1P16157 1881 aa19.79■□□□□ 0.76
PRPF40A-209ENST00000486100 KMT2EQ8IZD2 1858 aa19.79■□□□□ 0.76
PRPF40A-209ENST00000486100 SCN1AP35498 2009 aa19.78■□□□□ 0.76
PRPF40A-209ENST00000486100 A0A1W2PRU2 124 aa19.78■□□□□ 0.76
PRPF40A-209ENST00000486100 PRPF40AO75400 957 aaKnown RBP19.78■□□□□ 0.76
PRPF40A-209ENST00000486100 FGF19O95750 216 aa19.78■□□□□ 0.76
PRPF40A-209ENST00000486100 SYKP43405 635 aa19.78■□□□□ 0.76
PRPF40A-209ENST00000486100 LHX1P48742 406 aa19.78■□□□□ 0.76
PRPF40A-209ENST00000486100 MRE11P49959 708 aa19.78■□□□□ 0.76
PRPF40A-209ENST00000486100 CDR1P51861 262 aa19.78■□□□□ 0.76
PRPF40A-209ENST00000486100 MYL7Q01449 175 aa19.78■□□□□ 0.76
PRPF40A-209ENST00000486100 CYP24A1Q07973 514 aa19.78■□□□□ 0.76
PRPF40A-209ENST00000486100 VEPH1Q14D04 833 aa19.78■□□□□ 0.76
PRPF40A-209ENST00000486100 PSMD6Q15008 389 aa19.78■□□□□ 0.76
PRPF40A-209ENST00000486100 MLF2Q15773 248 aaPredicted RBP19.78■□□□□ 0.76
PRPF40A-209ENST00000486100 NFE2Q16621 373 aaPredicted RBP19.78■□□□□ 0.76
PRPF40A-209ENST00000486100 TRAPPC11Q7Z392 1133 aa19.78■□□□□ 0.76
PRPF40A-209ENST00000486100 DTWD2Q8NBA8 298 aa19.78■□□□□ 0.76
PRPF40A-209ENST00000486100 GOLGA5Q8TBA6 731 aa19.78■□□□□ 0.76
PRPF40A-209ENST00000486100 ZSCAN18Q8TBC5 510 aaPredicted RBP19.78■□□□□ 0.76
PRPF40A-209ENST00000486100 FAM200AQ8TCP9 573 aa19.78■□□□□ 0.76
PRPF40A-209ENST00000486100 HPDLQ96IR7 371 aa19.78■□□□□ 0.76
PRPF40A-209ENST00000486100 PHOX2BQ99453 314 aa19.78■□□□□ 0.76
PRPF40A-209ENST00000486100 TMLHEQ9NVH6 421 aa19.78■□□□□ 0.76
PRPF40A-209ENST00000486100 SIT1Q9Y3P8 196 aa19.78■□□□□ 0.76
PRPF40A-209ENST00000486100 A0A1W2PQ27 194 aa19.77■□□□□ 0.76
PRPF40A-209ENST00000486100 A0A1W2PQ64 194 aa19.77■□□□□ 0.76
PRPF40A-209ENST00000486100 A0A1W2PQD8 194 aa19.77■□□□□ 0.76
PRPF40A-209ENST00000486100 GABRDO14764 452 aa19.77■□□□□ 0.76
PRPF40A-209ENST00000486100 DLATP10515 647 aaKnown RBP19.77■□□□□ 0.76
PRPF40A-209ENST00000486100 ATF6P18850 670 aa19.77■□□□□ 0.76
PRPF40A-209ENST00000486100 TNNI1P19237 187 aa19.77■□□□□ 0.76
PRPF40A-209ENST00000486100 NDUFA8P51970 172 aa19.77■□□□□ 0.76
PRPF40A-209ENST00000486100 BECN1Q14457 450 aa19.77■□□□□ 0.76
PRPF40A-209ENST00000486100 SOWAHAQ2M3V2 549 aa19.77■□□□□ 0.76
PRPF40A-209ENST00000486100 GAREM2Q75VX8 874 aa19.77■□□□□ 0.76
PRPF40A-209ENST00000486100 LIMS2Q7Z4I7 341 aa19.77■□□□□ 0.76
PRPF40A-209ENST00000486100 E2F7Q96AV8 911 aa19.77■□□□□ 0.76
PRPF40A-209ENST00000486100 CCDC127Q96BQ5 260 aa19.77■□□□□ 0.76
PRPF40A-209ENST00000486100 CGRRF1Q99675 332 aa19.77■□□□□ 0.76
PRPF40A-209ENST00000486100 LPIN3Q9BQK8 851 aa19.77■□□□□ 0.76
PRPF40A-209ENST00000486100 DDX23Q9BUQ8 820 aaKnown RBP19.77■□□□□ 0.76
PRPF40A-209ENST00000486100 TRMT61BQ9BVS5 477 aaKnown RBP19.77■□□□□ 0.76
PRPF40A-209ENST00000486100 ATXN3LQ9H3M9 355 aa19.77■□□□□ 0.76
PRPF40A-209ENST00000486100 SLITRK6Q9H5Y7 841 aa19.77■□□□□ 0.76
PRPF40A-209ENST00000486100 ZNF334Q9HCZ1 680 aaPredicted RBP19.77■□□□□ 0.76
PRPF40A-209ENST00000486100 ABI2Q9NYB9 513 aaPredicted RBP19.77■□□□□ 0.76
PRPF40A-209ENST00000486100 KANSL1LA0AUZ9 987 aa19.76■□□□□ 0.75
PRPF40A-209ENST00000486100 EXOC3O60645 756 aa19.76■□□□□ 0.75
PRPF40A-209ENST00000486100 CST3P01034 146 aaPredicted RBP19.76■□□□□ 0.75
PRPF40A-209ENST00000486100 PSMC3P17980 439 aa19.76■□□□□ 0.75
PRPF40A-209ENST00000486100 GABRR2P28476 465 aa19.76■□□□□ 0.75
PRPF40A-209ENST00000486100 VIPR2P41587 438 aa19.76■□□□□ 0.75
PRPF40A-209ENST00000486100 INTS6LQ5JSJ4 861 aaKnown RBP19.76■□□□□ 0.75
PRPF40A-209ENST00000486100 OSTM1Q86WC4 334 aa19.76■□□□□ 0.75
PRPF40A-209ENST00000486100 ADGRF2Q8IZF7 708 aa19.76■□□□□ 0.75
PRPF40A-209ENST00000486100 KIAA0895Q8NCT3 520 aa19.76■□□□□ 0.75
PRPF40A-209ENST00000486100 GIPC2Q8TF65 315 aa19.76■□□□□ 0.75
PRPF40A-209ENST00000486100 FAM86C1Q9NVL1 165 aa19.76■□□□□ 0.75
PRPF40A-209ENST00000486100 DCNP07585 359 aaKnown RBP19.75■□□□□ 0.75
PRPF40A-209ENST00000486100 ACAT1P24752 427 aaKnown RBP19.75■□□□□ 0.75
PRPF40A-209ENST00000486100 PCSK1P29120 753 aa19.75■□□□□ 0.75
PRPF40A-209ENST00000486100 GRM2Q14416 872 aa19.75■□□□□ 0.75
PRPF40A-209ENST00000486100 TAF12Q16514 161 aa19.75■□□□□ 0.75
PRPF40A-209ENST00000486100 VITQ6UXI7 678 aa19.75■□□□□ 0.75
PRPF40A-209ENST00000486100 MFSD6LQ8IWD5 586 aa19.75■□□□□ 0.75
PRPF40A-209ENST00000486100 TMEM174Q8WUU8 243 aa19.75■□□□□ 0.75
PRPF40A-209ENST00000486100 DEPDC1BQ8WUY9 529 aa19.75■□□□□ 0.75
PRPF40A-209ENST00000486100 ZNF516Q92618 1163 aa19.75■□□□□ 0.75
PRPF40A-209ENST00000486100 DNASE1L2Q92874 299 aa19.75■□□□□ 0.75
PRPF40A-209ENST00000486100 PKMYT1Q99640 499 aa19.75■□□□□ 0.75
PRPF40A-209ENST00000486100 PI4K2AQ9BTU6 479 aa19.75■□□□□ 0.75
PRPF40A-209ENST00000486100 FOXQ1Q9C009 403 aa19.75■□□□□ 0.75
PRPF40A-209ENST00000486100 BRD9Q9H8M2 597 aa19.75■□□□□ 0.75
PRPF40A-209ENST00000486100 DMAC2Q9NW81 257 aa19.75■□□□□ 0.75
PRPF40A-209ENST00000486100 DLGAP2Q9P1A6 1054 aa19.75■□□□□ 0.75
PRPF40A-209ENST00000486100 GTF3C4Q9UKN8 822 aa19.75■□□□□ 0.75
PRPF40A-209ENST00000486100 HEPACAM2A8MVW5 462 aa19.74■□□□□ 0.75
PRPF40A-209ENST00000486100 RPN1P04843 607 aaKnown RBP19.74■□□□□ 0.75
PRPF40A-209ENST00000486100 FAM163BP0C2L3 166 aa19.74■□□□□ 0.75
PRPF40A-209ENST00000486100 CDC25CP30307 473 aa19.74■□□□□ 0.75
PRPF40A-209ENST00000486100 ARHGAP15Q53QZ3 475 aa19.74■□□□□ 0.75
PRPF40A-209ENST00000486100 STXBP5Q5T5C0 1151 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms