RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 SEC23AQ15436 765 aa7.46□□□□□ -1.22
SMC4-217ENST00000485867 CSRP2Q16527 193 aa7.46□□□□□ -1.22
SMC4-217ENST00000485867 ZBTB41Q5SVQ8 909 aa7.46□□□□□ -1.22
SMC4-217ENST00000485867 IFIT1BQ5T764 474 aaKnown RBP7.46□□□□□ -1.22
SMC4-217ENST00000485867 CDKAL1Q5VV42 579 aa7.46□□□□□ -1.22
SMC4-217ENST00000485867 UNQ6494/PRO21346Q6UXR6 183 aa7.46□□□□□ -1.22
SMC4-217ENST00000485867 RSPO2Q6UXX9 243 aaPredicted RBP7.46□□□□□ -1.22
SMC4-217ENST00000485867 GET4Q7L5D6 327 aaPredicted RBP7.46□□□□□ -1.22
SMC4-217ENST00000485867 ZNF707Q96C28 371 aaPredicted RBP7.46□□□□□ -1.22
SMC4-217ENST00000485867 MYL10Q9BUA6 226 aa7.46□□□□□ -1.22
SMC4-217ENST00000485867 CHMP4BQ9H444 224 aaKnown RBP7.46□□□□□ -1.22
SMC4-217ENST00000485867 C19orf73Q9NVV2 129 aa7.46□□□□□ -1.22
SMC4-217ENST00000485867 SALL3Q9BXA9 1300 aa7.46□□□□□ -1.22
SMC4-217ENST00000485867 IGKV6D-21A0A0A0MT36 114 aa7.45□□□□□ -1.22
SMC4-217ENST00000485867 ZNF213O14771 459 aa7.45□□□□□ -1.22
SMC4-217ENST00000485867 B4GALT3O60512 393 aa7.45□□□□□ -1.22
SMC4-217ENST00000485867 PRPF40AO75400 957 aaKnown RBP7.45□□□□□ -1.22
SMC4-217ENST00000485867 C22orf31O95567 290 aa7.45□□□□□ -1.22
SMC4-217ENST00000485867 MYBP10242 640 aa7.45□□□□□ -1.22
SMC4-217ENST00000485867 MX1P20591 662 aa7.45□□□□□ -1.22
SMC4-217ENST00000485867 CD72P21854 359 aa7.45□□□□□ -1.22
SMC4-217ENST00000485867 AFMP43652 599 aa7.45□□□□□ -1.22
SMC4-217ENST00000485867 RPS9P46781 194 aaKnown RBP7.45□□□□□ -1.22
SMC4-217ENST00000485867 SLC11A1P49279 550 aa7.45□□□□□ -1.22
SMC4-217ENST00000485867 SLC26A2P50443 739 aa7.45□□□□□ -1.22
SMC4-217ENST00000485867 LIMK1P53667 647 aa7.45□□□□□ -1.22
SMC4-217ENST00000485867 NMIQ13287 307 aaPredicted RBP7.45□□□□□ -1.22
SMC4-217ENST00000485867 SLC44A4Q53GD3 710 aa7.45□□□□□ -1.22
SMC4-217ENST00000485867 ZNF484Q5JVG2 852 aa7.45□□□□□ -1.22
SMC4-217ENST00000485867 PRAMEF13Q5VWM6 474 aa7.45□□□□□ -1.22
SMC4-217ENST00000485867 IL31Q6EBC2 164 aa7.45□□□□□ -1.22
SMC4-217ENST00000485867 LRSAM1Q6UWE0 723 aa7.45□□□□□ -1.22
SMC4-217ENST00000485867 PARM1Q6UWI2 310 aa7.45□□□□□ -1.22
SMC4-217ENST00000485867 PRR23BQ6ZRT6 265 aa7.45□□□□□ -1.22
SMC4-217ENST00000485867 CELF5Q8N6W0 485 aaKnown RBP7.45□□□□□ -1.22
SMC4-217ENST00000485867 RSPH1Q8WYR4 309 aa7.45□□□□□ -1.22
SMC4-217ENST00000485867 FGF14Q92915 247 aa7.45□□□□□ -1.22
SMC4-217ENST00000485867 MAP4K1Q92918 833 aa7.45□□□□□ -1.22
SMC4-217ENST00000485867 CUL5Q93034 780 aa7.45□□□□□ -1.22
SMC4-217ENST00000485867 EVI5LQ96CN4 794 aa7.45□□□□□ -1.22
SMC4-217ENST00000485867 UBAC1Q9BSL1 405 aa7.45□□□□□ -1.22
SMC4-217ENST00000485867 KRTAP4-7Q9BYR0 210 aa7.45□□□□□ -1.22
SMC4-217ENST00000485867 JADE2Q9NQC1 790 aa7.45□□□□□ -1.22
SMC4-217ENST00000485867 TBC1D13Q9NVG8 400 aa7.45□□□□□ -1.22
SMC4-217ENST00000485867 FAM53CQ9NYF3 392 aa7.45□□□□□ -1.22
SMC4-217ENST00000485867 DNAJB4Q9UDY4 337 aa7.45□□□□□ -1.22
SMC4-217ENST00000485867 PCDHB5Q9Y5E4 795 aa7.45□□□□□ -1.22
SMC4-217ENST00000485867 ASH1LQ9NR48 2969 aaKnown RBP7.45□□□□□ -1.22
SMC4-217ENST00000485867 NFASCO94856 1347 aa7.45□□□□□ -1.22
SMC4-217ENST00000485867 TDRD15B5MCY1 1934 aaKnown RBP7.44□□□□□ -1.22
SMC4-217ENST00000485867 COL4A2P08572 1712 aa7.44□□□□□ -1.22
SMC4-217ENST00000485867 H3BS24 57 aa7.44□□□□□ -1.22
SMC4-217ENST00000485867 TEX28O15482 410 aa7.44□□□□□ -1.22
SMC4-217ENST00000485867 MAFGO15525 162 aa7.44□□□□□ -1.22
SMC4-217ENST00000485867 FOXD2O60548 495 aaPredicted RBP7.44□□□□□ -1.22
SMC4-217ENST00000485867 GLUD1P00367 558 aa7.44□□□□□ -1.22
SMC4-217ENST00000485867 CLCN3P51790 818 aa7.44□□□□□ -1.22
SMC4-217ENST00000485867 MTAPQ13126 283 aa7.44□□□□□ -1.22
SMC4-217ENST00000485867 SEPT6Q14141 434 aa7.44□□□□□ -1.22
SMC4-217ENST00000485867 ZNF746Q6NUN9 644 aaPredicted RBP7.44□□□□□ -1.22
SMC4-217ENST00000485867 AGMOQ6ZNB7 445 aa7.44□□□□□ -1.22
SMC4-217ENST00000485867 CCDC60Q8IWA6 550 aaPredicted RBP7.44□□□□□ -1.22
SMC4-217ENST00000485867 BHLHE22Q8NFJ8 381 aaPredicted RBP7.44□□□□□ -1.22
SMC4-217ENST00000485867 PIBF1Q8WXW3 757 aa7.44□□□□□ -1.22
SMC4-217ENST00000485867 LIN37Q96GY3 246 aaPredicted RBP7.44□□□□□ -1.22
SMC4-217ENST00000485867 FAM84AQ96KN4 292 aa7.44□□□□□ -1.22
SMC4-217ENST00000485867 SLC38A3Q99624 504 aa7.44□□□□□ -1.22
SMC4-217ENST00000485867 SDF4Q9BRK5 362 aa7.44□□□□□ -1.22
SMC4-217ENST00000485867 GBP3Q9H0R5 595 aa7.44□□□□□ -1.22
SMC4-217ENST00000485867 ADAMTS10Q9H324 1103 aa7.44□□□□□ -1.22
SMC4-217ENST00000485867 MRPL17Q9NRX2 175 aaKnown RBP7.44□□□□□ -1.22
SMC4-217ENST00000485867 STK39Q9UEW8 545 aa7.44□□□□□ -1.22
SMC4-217ENST00000485867 AK5Q9Y6K8 562 aa7.44□□□□□ -1.22
SMC4-217ENST00000485867 ZFP37Q9Y6Q3 630 aaPredicted RBP7.44□□□□□ -1.22
SMC4-217ENST00000485867 ADAMTS20P59510 1910 aa7.44□□□□□ -1.22
SMC4-217ENST00000485867 DSPP15924 2871 aaKnown RBP7.44□□□□□ -1.22
SMC4-217ENST00000485867 PDCD11Q14690 1871 aaKnown RBP7.43□□□□□ -1.22
SMC4-217ENST00000485867 TICRRQ7Z2Z1 1910 aa7.43□□□□□ -1.22
SMC4-217ENST00000485867 SRRM3A6NNA2 597 aaPredicted RBP7.43□□□□□ -1.22
SMC4-217ENST00000485867 MEIS3P2A8K0S8 358 aa7.43□□□□□ -1.22
SMC4-217ENST00000485867 NCAM2O15394 837 aa7.43□□□□□ -1.22
SMC4-217ENST00000485867 CCNE2O96020 404 aa7.43□□□□□ -1.22
SMC4-217ENST00000485867 URODP06132 367 aa7.43□□□□□ -1.22
SMC4-217ENST00000485867 DARSP14868 501 aaKnown RBP7.43□□□□□ -1.22
SMC4-217ENST00000485867 FGFR4P22455 802 aa7.43□□□□□ -1.22
SMC4-217ENST00000485867 AK2P54819 239 aa7.43□□□□□ -1.22
SMC4-217ENST00000485867 NLRP11P59045 1033 aaKnown RBP7.43□□□□□ -1.22
SMC4-217ENST00000485867 PFKPQ01813 784 aa7.43□□□□□ -1.22
SMC4-217ENST00000485867 RNASELQ05823 741 aaKnown RBP7.43□□□□□ -1.22
SMC4-217ENST00000485867 ITGB3BPQ13352 177 aaPredicted RBP7.43□□□□□ -1.22
SMC4-217ENST00000485867 MLANAQ16655 118 aa7.43□□□□□ -1.22
SMC4-217ENST00000485867 NOMO2Q5JPE7 1267 aa7.43□□□□□ -1.22
SMC4-217ENST00000485867 FAM160B1Q5W0V3 765 aa7.43□□□□□ -1.22
SMC4-217ENST00000485867 GLB1LQ6UWU2 654 aa7.43□□□□□ -1.22
SMC4-217ENST00000485867 TPRG1Q6ZUI0 275 aa7.43□□□□□ -1.22
SMC4-217ENST00000485867 THAP5Q7Z6K1 395 aa7.43□□□□□ -1.22
SMC4-217ENST00000485867 ZNF280BQ86YH2 543 aa7.43□□□□□ -1.22
SMC4-217ENST00000485867 METTL13Q8N6R0 699 aa7.43□□□□□ -1.22
SMC4-217ENST00000485867 LINC01465Q8N7H1 131 aa7.43□□□□□ -1.22
SMC4-217ENST00000485867 HDAC7Q8WUI4 952 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms