RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 C1orf43Q9BWL3 253 aa5.33□□□□□ -1.56
SMC4-215ENST00000484799 GPR35Q9HC97 309 aa5.33□□□□□ -1.56
SMC4-215ENST00000484799 SARS2Q9NP81 518 aaKnown RBP5.33□□□□□ -1.56
SMC4-215ENST00000484799 ARHGEF3Q9NR81 526 aa5.33□□□□□ -1.56
SMC4-215ENST00000484799 PNPOQ9NVS9 261 aa5.33□□□□□ -1.56
SMC4-215ENST00000484799 VSX1Q9NZR4 365 aaPredicted RBP5.33□□□□□ -1.56
SMC4-215ENST00000484799 PCDHA1Q9Y5I3 950 aa5.33□□□□□ -1.56
SMC4-215ENST00000484799 COL4A3BPQ9Y5P4 624 aa5.33□□□□□ -1.56
SMC4-215ENST00000484799 MANSC4A6NHS7 340 aaPredicted RBP5.32□□□□□ -1.56
SMC4-215ENST00000484799 E9PLN8 166 aa5.32□□□□□ -1.56
SMC4-215ENST00000484799 C1QL1O75973 258 aa5.32□□□□□ -1.56
SMC4-215ENST00000484799 PRKCGP05129 697 aa5.32□□□□□ -1.56
SMC4-215ENST00000484799 HNRNPCP07910 306 aaKnown RBP eCLIP5.32□□□□□ -1.56
SMC4-215ENST00000484799 NCLP19338 710 aaKnown RBP5.32□□□□□ -1.56
SMC4-215ENST00000484799 GCLCP48506 637 aaPredicted RBP5.32□□□□□ -1.56
SMC4-215ENST00000484799 PDE1AP54750 535 aa5.32□□□□□ -1.56
SMC4-215ENST00000484799 KRTAP1-1Q07627 177 aa5.32□□□□□ -1.56
SMC4-215ENST00000484799 KIF22Q14807 665 aa5.32□□□□□ -1.56
SMC4-215ENST00000484799 PGS1Q32NB8 556 aa5.32□□□□□ -1.56
SMC4-215ENST00000484799 FAM160B1Q5W0V3 765 aa5.32□□□□□ -1.56
SMC4-215ENST00000484799 USP45Q70EL2 814 aa5.32□□□□□ -1.56
SMC4-215ENST00000484799 SRRM1Q8IYB3 904 aaKnown RBP5.32□□□□□ -1.56
SMC4-215ENST00000484799 FANCBQ8NB91 859 aa5.32□□□□□ -1.56
SMC4-215ENST00000484799 BRIX1Q8TDN6 353 aaKnown RBP5.32□□□□□ -1.56
SMC4-215ENST00000484799 HSPBAP1Q96EW2 488 aa5.32□□□□□ -1.56
SMC4-215ENST00000484799 VKORC1Q9BQB6 163 aa5.32□□□□□ -1.56
SMC4-215ENST00000484799 SMOC2Q9H3U7 446 aa5.32□□□□□ -1.56
SMC4-215ENST00000484799 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.32□□□□□ -1.56
SMC4-215ENST00000484799 LUC7L2Q9Y383 392 aaKnown RBP5.32□□□□□ -1.56
SMC4-215ENST00000484799 POLR2AP24928 1970 aaKnown RBP5.31□□□□□ -1.56
SMC4-215ENST00000484799 ADGRA2Q96PE1 1338 aa5.31□□□□□ -1.56
SMC4-215ENST00000484799 NT5C1B-RDH14C9J2C7 533 aa5.31□□□□□ -1.56
SMC4-215ENST00000484799 MYO1CO00159 1063 aa5.31□□□□□ -1.56
SMC4-215ENST00000484799 RHOP08100 348 aa5.31□□□□□ -1.56
SMC4-215ENST00000484799 HK3P52790 923 aa5.31□□□□□ -1.56
SMC4-215ENST00000484799 EIF2B5Q13144 721 aaKnown RBP5.31□□□□□ -1.56
SMC4-215ENST00000484799 TMEM119Q4V9L6 283 aa5.31□□□□□ -1.56
SMC4-215ENST00000484799 ICE2Q659A1 982 aa5.31□□□□□ -1.56
SMC4-215ENST00000484799 CEP85Q6P2H3 762 aa5.31□□□□□ -1.56
SMC4-215ENST00000484799 SLC29A4Q7RTT9 530 aa5.31□□□□□ -1.56
SMC4-215ENST00000484799 FAM46DQ8NEK8 389 aa5.31□□□□□ -1.56
SMC4-215ENST00000484799 MTFMTQ96DP5 389 aaKnown RBP5.31□□□□□ -1.56
SMC4-215ENST00000484799 TINAGL1Q9GZM7 467 aaPredicted RBP5.31□□□□□ -1.56
SMC4-215ENST00000484799 PCDH12Q9NPG4 1184 aa5.31□□□□□ -1.56
SMC4-215ENST00000484799 AASDHPPTQ9NRN7 309 aa5.31□□□□□ -1.56
SMC4-215ENST00000484799 FZD9O00144 591 aa5.3□□□□□ -1.56
SMC4-215ENST00000484799 LPOP22079 712 aaPredicted RBP5.3□□□□□ -1.56
SMC4-215ENST00000484799 SLC10A2Q12908 348 aaPredicted RBP5.3□□□□□ -1.56
SMC4-215ENST00000484799 EZH2Q15910 746 aaKnown RBP5.3□□□□□ -1.56
SMC4-215ENST00000484799 KHDC1LQ5JSQ8 128 aa5.3□□□□□ -1.56
SMC4-215ENST00000484799 TMEM108Q6UXF1 575 aa5.3□□□□□ -1.56
SMC4-215ENST00000484799 DDB2Q92466 427 aa5.3□□□□□ -1.56
SMC4-215ENST00000484799 TTYH3Q9C0H2 523 aa5.3□□□□□ -1.56
SMC4-215ENST00000484799 MRPL46Q9H2W6 279 aaKnown RBP5.3□□□□□ -1.56
SMC4-215ENST00000484799 ETAA1Q9NY74 926 aa5.3□□□□□ -1.56
SMC4-215ENST00000484799 SH3BP4Q9P0V3 963 aa5.3□□□□□ -1.56
SMC4-215ENST00000484799 PPM1DO15297 605 aa5.29□□□□□ -1.56
SMC4-215ENST00000484799 TLR5O60602 858 aa5.29□□□□□ -1.56
SMC4-215ENST00000484799 JTBO76095 146 aa5.29□□□□□ -1.56
SMC4-215ENST00000484799 POU2F2P09086 479 aa5.29□□□□□ -1.56
SMC4-215ENST00000484799 TYRP14679 529 aa5.29□□□□□ -1.56
SMC4-215ENST00000484799 PXNP49023 591 aaPredicted RBP5.29□□□□□ -1.56
SMC4-215ENST00000484799 IQCB1Q15051 598 aa5.29□□□□□ -1.56
SMC4-215ENST00000484799 LLGL1Q15334 1064 aa5.29□□□□□ -1.56
SMC4-215ENST00000484799 LONRF3Q496Y0 759 aa5.29□□□□□ -1.56
SMC4-215ENST00000484799 ZNF618Q5T7W0 954 aa5.29□□□□□ -1.56
SMC4-215ENST00000484799 ZNF804AQ7Z570 1209 aa5.29□□□□□ -1.56
SMC4-215ENST00000484799 FAM90A1Q86YD7 464 aa5.29□□□□□ -1.56
SMC4-215ENST00000484799 CDK5RAP3Q96JB5 506 aa5.29□□□□□ -1.56
SMC4-215ENST00000484799 MAP3K14Q99558 947 aa5.29□□□□□ -1.56
SMC4-215ENST00000484799 NRIP3Q9NQ35 241 aa5.29□□□□□ -1.56
SMC4-215ENST00000484799 SERTAD4Q9NUC0 356 aa5.29□□□□□ -1.56
SMC4-215ENST00000484799 RNF7Q9UBF6 113 aa5.29□□□□□ -1.56
SMC4-215ENST00000484799 DNAJC9-AS1A6NH13 148 aa5.28□□□□□ -1.56
SMC4-215ENST00000484799 VWC2LB2RUY7 222 aa5.28□□□□□ -1.56
SMC4-215ENST00000484799 SLC16A3O15427 465 aaKnown RBP5.28□□□□□ -1.56
SMC4-215ENST00000484799 ONECUT2O95948 504 aa5.28□□□□□ -1.56
SMC4-215ENST00000484799 AHSGP02765 367 aa5.28□□□□□ -1.56
SMC4-215ENST00000484799 ATXN1LP0C7T5 689 aaKnown RBP5.28□□□□□ -1.56
SMC4-215ENST00000484799 ELFN1P0C7U0 828 aa5.28□□□□□ -1.56
SMC4-215ENST00000484799 AKAP5P24588 427 aa5.28□□□□□ -1.56
SMC4-215ENST00000484799 ZNF81P51508 661 aa5.28□□□□□ -1.56
SMC4-215ENST00000484799 E2F2Q14209 437 aa5.28□□□□□ -1.56
SMC4-215ENST00000484799 TBC1D25Q3MII6 688 aa5.28□□□□□ -1.56
SMC4-215ENST00000484799 PCID2Q5JVF3 399 aa5.28□□□□□ -1.56
SMC4-215ENST00000484799 TMPRSS9Q7Z410 1059 aa5.28□□□□□ -1.56
SMC4-215ENST00000484799 LRRC71Q8N4P6 559 aa5.28□□□□□ -1.56
SMC4-215ENST00000484799 CHMP4CQ96CF2 233 aa5.28□□□□□ -1.56
SMC4-215ENST00000484799 SLC46A1Q96NT5 459 aa5.28□□□□□ -1.56
SMC4-215ENST00000484799 ASPSCR1Q9BZE9 553 aa5.28□□□□□ -1.56
SMC4-215ENST00000484799 DKK3Q9UBP4 350 aa5.28□□□□□ -1.56
SMC4-215ENST00000484799 AGAP1Q9UPQ3 857 aa5.28□□□□□ -1.56
SMC4-215ENST00000484799 ANKRD6Q9Y2G4 727 aa5.28□□□□□ -1.56
SMC4-215ENST00000484799 WDR27A2RRH5 827 aa5.27□□□□□ -1.57
SMC4-215ENST00000484799 WDR91A4D1P6 747 aa5.27□□□□□ -1.57
SMC4-215ENST00000484799 TARM1B6A8C7 271 aa5.27□□□□□ -1.57
SMC4-215ENST00000484799 MARCH6O60337 910 aa5.27□□□□□ -1.57
SMC4-215ENST00000484799 CYP2C18P33260 490 aa5.27□□□□□ -1.57
SMC4-215ENST00000484799 FXR1P51114 621 aaKnown RBP eCLIP5.27□□□□□ -1.57
SMC4-215ENST00000484799 MAP2K6P52564 334 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms