RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 ANKRD63C9JTQ0 380 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 SYN3O14994 580 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 KLRC4O43908 158 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 MICAL2O94851 1124 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 RHOBTB3O94955 611 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 RPN1P04843 607 aaKnown RBP10.8□□□□□ -0.68
CPSF4-213ENST00000484112 RETP07949 1114 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 ADRB1P08588 477 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 CXCL8P10145 99 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 TDGF1P13385 188 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 ADSSP30520 456 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 LRPAP1P30533 357 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 MCM4P33991 863 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 FNTBP49356 437 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 KPNA1P52294 538 aaPredicted RBP10.8□□□□□ -0.68
CPSF4-213ENST00000484112 DMWDQ09019 674 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 DPYDQ12882 1025 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 SRSF5Q13243 272 aaKnown RBP10.8□□□□□ -0.68
CPSF4-213ENST00000484112 SURF1Q15526 300 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 TEAD2Q15562 447 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 ZBTB6Q15916 424 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 ENOX2Q16206 610 aaKnown RBP10.8□□□□□ -0.68
CPSF4-213ENST00000484112 ST3GAL2Q16842 350 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 HEATR6Q6AI08 1181 aaKnown RBP10.8□□□□□ -0.68
CPSF4-213ENST00000484112 CLEC17AQ6ZS10 378 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 HS2ST1Q7LGA3 356 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 C12orf56Q8IXR9 622 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 ENGASEQ8NFI3 743 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 TTC8Q8TAM2 541 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 NETO1Q8TDF5 533 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 CSGALNACT1Q8TDX6 532 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 DEPDC1BQ8WUY9 529 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 SCFD1Q8WVM8 642 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 C18orf25Q96B23 403 aaPredicted RBP10.8□□□□□ -0.68
CPSF4-213ENST00000484112 ZMAT2Q96NC0 199 aaKnown RBP10.8□□□□□ -0.68
CPSF4-213ENST00000484112 BLZF1Q9H2G9 400 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 GOLPH3LQ9H4A5 285 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 ASAH2Q9NR71 780 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 SEMA4GQ9NTN9 838 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 RBM12Q9NTZ6 932 aaKnown RBP10.8□□□□□ -0.68
CPSF4-213ENST00000484112 RMND1Q9NWS8 449 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 CEP72Q9P209 647 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 CITO14578 2027 aa10.8□□□□□ -0.68
CPSF4-213ENST00000484112 HEPACAM2A8MVW5 462 aa10.79□□□□□ -0.68
CPSF4-213ENST00000484112 SLC30A4O14863 429 aa10.79□□□□□ -0.68
CPSF4-213ENST00000484112 HRO43593 1189 aa10.79□□□□□ -0.68
CPSF4-213ENST00000484112 EXTL3O43909 919 aa10.79□□□□□ -0.68
CPSF4-213ENST00000484112 MOSPD3O75425 235 aa10.79□□□□□ -0.68
CPSF4-213ENST00000484112 PRPF6O94906 941 aaKnown RBP10.79□□□□□ -0.68
CPSF4-213ENST00000484112 SMC2O95347 1197 aa10.79□□□□□ -0.68
CPSF4-213ENST00000484112 CHRNB1P11230 501 aa10.79□□□□□ -0.68
CPSF4-213ENST00000484112 CPB1P15086 417 aa10.79□□□□□ -0.68
CPSF4-213ENST00000484112 SOX9P48436 509 aa10.79□□□□□ -0.68
CPSF4-213ENST00000484112 KCNA1Q09470 495 aa10.79□□□□□ -0.68
CPSF4-213ENST00000484112 MRPL58Q14197 206 aaKnown RBP10.79□□□□□ -0.68
CPSF4-213ENST00000484112 MYBPC2Q14324 1141 aa10.79□□□□□ -0.68
CPSF4-213ENST00000484112 GAS6Q14393 721 aa10.79□□□□□ -0.68
CPSF4-213ENST00000484112 KNOP1Q1ED39 458 aaKnown RBP10.79□□□□□ -0.68
CPSF4-213ENST00000484112 KMT5BQ4FZB7 885 aa10.79□□□□□ -0.68
CPSF4-213ENST00000484112 TPGS2Q68CL5 300 aa10.79□□□□□ -0.68
CPSF4-213ENST00000484112 ZNF280DQ6N043 979 aa10.79□□□□□ -0.68
CPSF4-213ENST00000484112 ARMCX5Q6P1M9 558 aa10.79□□□□□ -0.68
CPSF4-213ENST00000484112 RNF19BQ6ZMZ0 732 aa10.79□□□□□ -0.68
CPSF4-213ENST00000484112 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.79□□□□□ -0.68
CPSF4-213ENST00000484112 MFSD6LQ8IWD5 586 aa10.79□□□□□ -0.68
CPSF4-213ENST00000484112 GPD1LQ8N335 351 aa10.79□□□□□ -0.68
CPSF4-213ENST00000484112 IPO9Q96P70 1041 aaKnown RBP10.79□□□□□ -0.68
CPSF4-213ENST00000484112 PGLYRP2Q96PD5 576 aa10.79□□□□□ -0.68
CPSF4-213ENST00000484112 GSDMAQ96QA5 445 aa10.79□□□□□ -0.68
CPSF4-213ENST00000484112 IER2Q9BTL4 223 aa10.79□□□□□ -0.68
CPSF4-213ENST00000484112 OXCT2Q9BYC2 517 aaPredicted RBP10.79□□□□□ -0.68
CPSF4-213ENST00000484112 AFF4Q9UHB7 1163 aaKnown RBP10.79□□□□□ -0.68
CPSF4-213ENST00000484112 CEP250Q9BV73 2442 aa10.79□□□□□ -0.68
CPSF4-213ENST00000484112 NCOR2Q9Y618 2525 aa10.78□□□□□ -0.68
CPSF4-213ENST00000484112 ZNF292O60281 2723 aa10.78□□□□□ -0.68
CPSF4-213ENST00000484112 SLC38A8A6NNN8 435 aa10.78□□□□□ -0.68
CPSF4-213ENST00000484112 LACTBL1A8MY62 500 aa10.78□□□□□ -0.68
CPSF4-213ENST00000484112 PDXKO00764 312 aa10.78□□□□□ -0.68
CPSF4-213ENST00000484112 MEFVO15553 781 aaPredicted RBP10.78□□□□□ -0.68
CPSF4-213ENST00000484112 GDF9O60383 454 aa10.78□□□□□ -0.68
CPSF4-213ENST00000484112 TNFSF9P41273 254 aa10.78□□□□□ -0.68
CPSF4-213ENST00000484112 UBE2HP62256 183 aa10.78□□□□□ -0.68
CPSF4-213ENST00000484112 STK4Q13043 487 aa10.78□□□□□ -0.68
CPSF4-213ENST00000484112 LRRC32Q14392 662 aa10.78□□□□□ -0.68
CPSF4-213ENST00000484112 TMEM132DQ14C87 1099 aa10.78□□□□□ -0.68
CPSF4-213ENST00000484112 SEZ6Q53EL9 994 aa10.78□□□□□ -0.68
CPSF4-213ENST00000484112 COBLL1Q53SF7 1204 aa10.78□□□□□ -0.68
CPSF4-213ENST00000484112 SPATA1Q5VX52 437 aa10.78□□□□□ -0.68
CPSF4-213ENST00000484112 CRELD2Q6UXH1 353 aaPredicted RBP10.78□□□□□ -0.68
CPSF4-213ENST00000484112 MAMSTRQ6ZN01 415 aa10.78□□□□□ -0.68
CPSF4-213ENST00000484112 PRR23CQ6ZRP0 262 aa10.78□□□□□ -0.68
CPSF4-213ENST00000484112 CEP68Q76N32 757 aa10.78□□□□□ -0.68
CPSF4-213ENST00000484112 SLC9A9Q8IVB4 645 aa10.78□□□□□ -0.68
CPSF4-213ENST00000484112 BRSK2Q8IWQ3 736 aa10.78□□□□□ -0.68
CPSF4-213ENST00000484112 SPEM1Q8N4L4 309 aa10.78□□□□□ -0.68
CPSF4-213ENST00000484112 APPL2Q8NEU8 664 aa10.78□□□□□ -0.68
CPSF4-213ENST00000484112 BEST2Q8NFU1 509 aa10.78□□□□□ -0.68
CPSF4-213ENST00000484112 SPATA20Q8TB22 786 aa10.78□□□□□ -0.68
CPSF4-213ENST00000484112 SHKBP1Q8TBC3 707 aa10.78□□□□□ -0.68
CPSF4-213ENST00000484112 FAM200AQ8TCP9 573 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms