RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 MEIS3P2A8K0S8 358 aa14.9□□□□□ -0.02
CLK3-204ENST00000483723 KPNA7A9QM74 516 aa14.9□□□□□ -0.02
CLK3-204ENST00000483723 MYO1FO00160 1098 aa14.9□□□□□ -0.02
CLK3-204ENST00000483723 ARVCFO00192 962 aa14.9□□□□□ -0.02
CLK3-204ENST00000483723 SPTLC1O15269 473 aa14.9□□□□□ -0.02
CLK3-204ENST00000483723 MICAL2O94851 1124 aa14.9□□□□□ -0.02
CLK3-204ENST00000483723 RHOXF2BP0C7M4 288 aa14.9□□□□□ -0.02
CLK3-204ENST00000483723 GHRP10912 638 aa14.9□□□□□ -0.02
CLK3-204ENST00000483723 TAF6P49848 677 aa14.9□□□□□ -0.02
CLK3-204ENST00000483723 CDK7P50613 346 aa14.9□□□□□ -0.02
CLK3-204ENST00000483723 RAB27AP51159 221 aa14.9□□□□□ -0.02
CLK3-204ENST00000483723 CLCN6P51797 869 aa14.9□□□□□ -0.02
CLK3-204ENST00000483723 PAK2Q13177 524 aa14.9□□□□□ -0.02
CLK3-204ENST00000483723 BRD3Q15059 726 aa14.9□□□□□ -0.02
CLK3-204ENST00000483723 STILQ15468 1287 aa14.9□□□□□ -0.02
CLK3-204ENST00000483723 SGO2Q562F6 1265 aa14.9□□□□□ -0.02
CLK3-204ENST00000483723 PPP1R15BQ5SWA1 713 aa14.9□□□□□ -0.02
CLK3-204ENST00000483723 LLGL2Q6P1M3 1020 aa14.9□□□□□ -0.02
CLK3-204ENST00000483723 WDR93Q6P2C0 686 aa14.9□□□□□ -0.02
CLK3-204ENST00000483723 LCLAT1Q6UWP7 414 aa14.9□□□□□ -0.02
CLK3-204ENST00000483723 DPH6Q7L8W6 267 aa14.9□□□□□ -0.02
CLK3-204ENST00000483723 MTERF4Q7Z6M4 381 aaKnown RBP14.9□□□□□ -0.02
CLK3-204ENST00000483723 ERICH1Q86X53 443 aa14.9□□□□□ -0.02
CLK3-204ENST00000483723 FEZF2Q8TBJ5 459 aa14.9□□□□□ -0.02
CLK3-204ENST00000483723 HEXIM2Q96MH2 286 aaKnown RBP14.9□□□□□ -0.02
CLK3-204ENST00000483723 PNKPQ96T60 521 aa14.9□□□□□ -0.02
CLK3-204ENST00000483723 RHOXF2Q9BQY4 288 aa14.9□□□□□ -0.02
CLK3-204ENST00000483723 RBM12Q9NTZ6 932 aaKnown RBP14.9□□□□□ -0.02
CLK3-204ENST00000483723 SLC38A7Q9NVC3 462 aa14.9□□□□□ -0.02
CLK3-204ENST00000483723 MIOSQ9NXC5 875 aa14.9□□□□□ -0.02
CLK3-204ENST00000483723 CYTH4Q9UIA0 394 aa14.9□□□□□ -0.02
CLK3-204ENST00000483723 NOD1Q9Y239 953 aa14.9□□□□□ -0.02
CLK3-204ENST00000483723 TRIM17Q9Y577 477 aa14.9□□□□□ -0.02
CLK3-204ENST00000483723 TMEM191CA6NGB0 347 aa14.89□□□□□ -0.03
CLK3-204ENST00000483723 PGRMC1O00264 195 aaKnown RBP14.89□□□□□ -0.03
CLK3-204ENST00000483723 CKBP12277 381 aa14.89□□□□□ -0.03
CLK3-204ENST00000483723 CTNNA1P35221 906 aaKnown RBP14.89□□□□□ -0.03
CLK3-204ENST00000483723 GPD2P43304 727 aa14.89□□□□□ -0.03
CLK3-204ENST00000483723 GABRB2P47870 512 aa14.89□□□□□ -0.03
CLK3-204ENST00000483723 SV2CQ496J9 727 aa14.89□□□□□ -0.03
CLK3-204ENST00000483723 GLE1Q53GS7 698 aaKnown RBP14.89□□□□□ -0.03
CLK3-204ENST00000483723 CRYBG2Q8N1P7 616 aa14.89□□□□□ -0.03
CLK3-204ENST00000483723 UBL4BQ8N7F7 174 aa14.89□□□□□ -0.03
CLK3-204ENST00000483723 KRT35Q92764 455 aa14.89□□□□□ -0.03
CLK3-204ENST00000483723 ZFP42Q96MM3 310 aa14.89□□□□□ -0.03
CLK3-204ENST00000483723 TRIM7Q9C029 511 aa14.89□□□□□ -0.03
CLK3-204ENST00000483723 TRPV6Q9H1D0 765 aa14.89□□□□□ -0.03
CLK3-204ENST00000483723 STARD7Q9NQZ5 370 aa14.89□□□□□ -0.03
CLK3-204ENST00000483723 CCDC151A5D8V7 595 aa14.89□□□□□ -0.03
CLK3-204ENST00000483723 TMEM110-MUSTN1A8MSY1 372 aa14.89□□□□□ -0.03
CLK3-204ENST00000483723 PROSCO94903 275 aa14.89□□□□□ -0.03
CLK3-204ENST00000483723 SKIP12755 728 aa14.89□□□□□ -0.03
CLK3-204ENST00000483723 LILRA4P59901 499 aa14.89□□□□□ -0.03
CLK3-204ENST00000483723 TAP1Q03518 808 aa14.89□□□□□ -0.03
CLK3-204ENST00000483723 ORC1Q13415 861 aa14.89□□□□□ -0.03
CLK3-204ENST00000483723 PTPN20Q4JDL3 420 aa14.89□□□□□ -0.03
CLK3-204ENST00000483723 PKDCCQ504Y2 493 aa14.89□□□□□ -0.03
CLK3-204ENST00000483723 ARHGAP17Q68EM7 881 aa14.89□□□□□ -0.03
CLK3-204ENST00000483723 PHLDB2Q86SQ0 1253 aa14.89□□□□□ -0.03
CLK3-204ENST00000483723 CPNE8Q86YQ8 564 aa14.89□□□□□ -0.03
CLK3-204ENST00000483723 HNRNPLLQ8WVV9 542 aaKnown RBP14.89□□□□□ -0.03
CLK3-204ENST00000483723 KBTBD7Q8WVZ9 684 aa14.89□□□□□ -0.03
CLK3-204ENST00000483723 GAD1Q99259 594 aa14.89□□□□□ -0.03
CLK3-204ENST00000483723 GOLGA2P5Q9HBQ8 144 aa14.89□□□□□ -0.03
CLK3-204ENST00000483723 ARGLU1Q9NWB6 273 aaPredicted RBP14.89□□□□□ -0.03
CLK3-204ENST00000483723 LCMT1Q9UIC8 334 aa14.89□□□□□ -0.03
CLK3-204ENST00000483723 STRIP2Q9ULQ0 834 aa14.89□□□□□ -0.03
CLK3-204ENST00000483723 THP07101 528 aa14.88□□□□□ -0.03
CLK3-204ENST00000483723 MAN1A1P33908 653 aa14.88□□□□□ -0.03
CLK3-204ENST00000483723 ZNF268Q14587 947 aaPredicted RBP14.88□□□□□ -0.03
CLK3-204ENST00000483723 CLUL1Q15846 466 aa14.88□□□□□ -0.03
CLK3-204ENST00000483723 TOP6BLQ8N6T0 577 aa14.88□□□□□ -0.03
CLK3-204ENST00000483723 C3orf20Q8ND61 904 aa14.88□□□□□ -0.03
CLK3-204ENST00000483723 RUBCNQ92622 972 aa14.88□□□□□ -0.03
CLK3-204ENST00000483723 LRRC1Q9BTT6 524 aa14.88□□□□□ -0.03
CLK3-204ENST00000483723 TSPYL2Q9H2G4 693 aaPredicted RBP14.88□□□□□ -0.03
CLK3-204ENST00000483723 PAK6Q9NQU5 681 aaPredicted RBP14.88□□□□□ -0.03
CLK3-204ENST00000483723 WDR35Q9P2L0 1181 aa14.88□□□□□ -0.03
CLK3-204ENST00000483723 PTPN22Q9Y2R2 807 aa14.88□□□□□ -0.03
CLK3-204ENST00000483723 ARL5CA6NH57 179 aa14.87□□□□□ -0.03
CLK3-204ENST00000483723 SIGLEC16A6NMB1 481 aa14.87□□□□□ -0.03
CLK3-204ENST00000483723 CCDC188H7C350 402 aa14.87□□□□□ -0.03
CLK3-204ENST00000483723 INPPL1O15357 1258 aa14.87□□□□□ -0.03
CLK3-204ENST00000483723 SPOPO43791 374 aa14.87□□□□□ -0.03
CLK3-204ENST00000483723 PFKMP08237 780 aa14.87□□□□□ -0.03
CLK3-204ENST00000483723 FGFR1P11362 822 aa14.87□□□□□ -0.03
CLK3-204ENST00000483723 MLH1P40692 756 aa14.87□□□□□ -0.03
CLK3-204ENST00000483723 MARCKSL1P49006 195 aa14.87□□□□□ -0.03
CLK3-204ENST00000483723 AFF1P51825 1210 aaKnown RBP14.87□□□□□ -0.03
CLK3-204ENST00000483723 RNASE9P60153 205 aaKnown RBP14.87□□□□□ -0.03
CLK3-204ENST00000483723 ZNF598Q86UK7 904 aaKnown RBP14.87□□□□□ -0.03
CLK3-204ENST00000483723 SH3TC2Q8TF17 1288 aa14.87□□□□□ -0.03
CLK3-204ENST00000483723 LPPQ93052 612 aa14.87□□□□□ -0.03
CLK3-204ENST00000483723 PGBD4Q96DM1 585 aa14.87□□□□□ -0.03
CLK3-204ENST00000483723 C18orf8Q96DM3 657 aa14.87□□□□□ -0.03
CLK3-204ENST00000483723 RNPC3Q96LT9 517 aaKnown RBP14.87□□□□□ -0.03
CLK3-204ENST00000483723 ADAM2Q99965 735 aa14.87□□□□□ -0.03
CLK3-204ENST00000483723 UNC93B1Q9H1C4 597 aa14.87□□□□□ -0.03
CLK3-204ENST00000483723 UBN1Q9NPG3 1134 aa14.87□□□□□ -0.03
CLK3-204ENST00000483723 WBP1LQ9NX94 342 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms