RNA–Protein interactions for RNA: ENST00000483145.1

CCDC57-209, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-209ENST00000483145 CAPN11Q9UMQ6 739 aa11.2□□□□□ -0.62
CCDC57-209ENST00000483145 REV3LO60673 3130 aa11.2□□□□□ -0.62
CCDC57-209ENST00000483145 H3BNC9 293 aa11.19□□□□□ -0.62
CCDC57-209ENST00000483145 MFAP3LO75121 409 aa11.19□□□□□ -0.62
CCDC57-209ENST00000483145 CD58P19256 250 aa11.19□□□□□ -0.62
CCDC57-209ENST00000483145 PCSK1P29120 753 aa11.19□□□□□ -0.62
CCDC57-209ENST00000483145 CASP14P31944 242 aa11.19□□□□□ -0.62
CCDC57-209ENST00000483145 SOX5P35711 763 aa11.19□□□□□ -0.62
CCDC57-209ENST00000483145 KCNQ1P51787 676 aa11.19□□□□□ -0.62
CCDC57-209ENST00000483145 ZNF132P52740 706 aa11.19□□□□□ -0.62
CCDC57-209ENST00000483145 CDH8P55286 799 aa11.19□□□□□ -0.62
CCDC57-209ENST00000483145 ZBED6P86452 979 aa11.19□□□□□ -0.62
CCDC57-209ENST00000483145 DSG1Q02413 1049 aa11.19□□□□□ -0.62
CCDC57-209ENST00000483145 YWHAHQ04917 246 aaPredicted RBP11.19□□□□□ -0.62
CCDC57-209ENST00000483145 GPM6BQ13491 265 aa11.19□□□□□ -0.62
CCDC57-209ENST00000483145 MRPL58Q14197 206 aaKnown RBP11.19□□□□□ -0.62
CCDC57-209ENST00000483145 ARID5BQ14865 1188 aa11.19□□□□□ -0.62
CCDC57-209ENST00000483145 VARS2Q5ST30 1063 aaKnown RBP11.19□□□□□ -0.62
CCDC57-209ENST00000483145 OVOS1Q6IE37 1185 aa11.19□□□□□ -0.62
CCDC57-209ENST00000483145 PDXDC1Q6P996 788 aa11.19□□□□□ -0.62
CCDC57-209ENST00000483145 ANKS3Q6ZW76 656 aa11.19□□□□□ -0.62
CCDC57-209ENST00000483145 OSTM1Q86WC4 334 aa11.19□□□□□ -0.62
CCDC57-209ENST00000483145 CNGA4Q8IV77 575 aa11.19□□□□□ -0.62
CCDC57-209ENST00000483145 DRC7Q8IY82 874 aa11.19□□□□□ -0.62
CCDC57-209ENST00000483145 FAM71AQ8IYT1 594 aa11.19□□□□□ -0.62
CCDC57-209ENST00000483145 ZNF397Q8NF99 534 aaPredicted RBP11.19□□□□□ -0.62
CCDC57-209ENST00000483145 WHAMMQ8TF30 809 aa11.19□□□□□ -0.62
CCDC57-209ENST00000483145 PIK3R5Q8WYR1 880 aa11.19□□□□□ -0.62
CCDC57-209ENST00000483145 MRPL38Q96DV4 380 aaKnown RBP11.19□□□□□ -0.62
CCDC57-209ENST00000483145 OXCT2Q9BYC2 517 aaPredicted RBP11.19□□□□□ -0.62
CCDC57-209ENST00000483145 NUCKS1Q9H1E3 243 aaKnown RBP11.19□□□□□ -0.62
CCDC57-209ENST00000483145 SNX25Q9H3E2 840 aa11.19□□□□□ -0.62
CCDC57-209ENST00000483145 PUF60Q9UHX1 559 aaKnown RBP11.19□□□□□ -0.62
CCDC57-209ENST00000483145 LUC7L2Q9Y383 392 aaKnown RBP11.19□□□□□ -0.62
CCDC57-209ENST00000483145 PCDHB4Q9Y5E5 795 aa11.19□□□□□ -0.62
CCDC57-209ENST00000483145 TIMM13Q9Y5L4 95 aaPredicted RBP11.19□□□□□ -0.62
CCDC57-209ENST00000483145 PTPRDP23468 1912 aa11.19□□□□□ -0.62
CCDC57-209ENST00000483145 ATG2AQ2TAZ0 1938 aa11.19□□□□□ -0.62
CCDC57-209ENST00000483145 SPTBN5Q9NRC6 3674 aaKnown RBP11.18□□□□□ -0.62
CCDC57-209ENST00000483145 LRRC53A6NM62 1247 aa11.18□□□□□ -0.62
CCDC57-209ENST00000483145 GOLGA6L6A8MZA4 724 aa11.18□□□□□ -0.62
CCDC57-209ENST00000483145 RNF225M0QZC1 329 aaPredicted RBP11.18□□□□□ -0.62
CCDC57-209ENST00000483145 FOXN3O00409 490 aaPredicted RBP11.18□□□□□ -0.62
CCDC57-209ENST00000483145 URODP06132 367 aa11.18□□□□□ -0.62
CCDC57-209ENST00000483145 PAEPP09466 180 aa11.18□□□□□ -0.62
CCDC57-209ENST00000483145 CTSAP10619 480 aa11.18□□□□□ -0.62
CCDC57-209ENST00000483145 GNL1P36915 607 aaPredicted RBP11.18□□□□□ -0.62
CCDC57-209ENST00000483145 STAT1P42224 750 aa11.18□□□□□ -0.62
CCDC57-209ENST00000483145 GLUD2P49448 558 aa11.18□□□□□ -0.62
CCDC57-209ENST00000483145 NDST1P52848 882 aa11.18□□□□□ -0.62
CCDC57-209ENST00000483145 RTP2Q5QGT7 225 aa11.18□□□□□ -0.62
CCDC57-209ENST00000483145 ZNF280DQ6N043 979 aa11.18□□□□□ -0.62
CCDC57-209ENST00000483145 TMEM270Q6UE05 265 aa11.18□□□□□ -0.62
CCDC57-209ENST00000483145 TAS1R1Q7RTX1 841 aa11.18□□□□□ -0.62
CCDC57-209ENST00000483145 CEP57Q86XR8 500 aa11.18□□□□□ -0.62
CCDC57-209ENST00000483145 VPS52Q8N1B4 723 aa11.18□□□□□ -0.62
CCDC57-209ENST00000483145 THEM5Q8N1Q8 247 aa11.18□□□□□ -0.62
CCDC57-209ENST00000483145 RBBP8NLQ8NC74 664 aaPredicted RBP11.18□□□□□ -0.62
CCDC57-209ENST00000483145 OR6B3Q8NGW1 331 aa11.18□□□□□ -0.62
CCDC57-209ENST00000483145 SPPL3Q8TCT6 385 aa11.18□□□□□ -0.62
CCDC57-209ENST00000483145 SYN2Q92777 582 aaPredicted RBP11.18□□□□□ -0.62
CCDC57-209ENST00000483145 PDLIM2Q96JY6 352 aa11.18□□□□□ -0.62
CCDC57-209ENST00000483145 DNAJC7Q99615 494 aa11.18□□□□□ -0.62
CCDC57-209ENST00000483145 RTP3Q9BQQ7 232 aa11.18□□□□□ -0.62
CCDC57-209ENST00000483145 ACBD6Q9BR61 282 aa11.18□□□□□ -0.62
CCDC57-209ENST00000483145 NT5C1AQ9BXI3 368 aa11.18□□□□□ -0.62
CCDC57-209ENST00000483145 DNAI2Q9GZS0 605 aa11.18□□□□□ -0.62
CCDC57-209ENST00000483145 ZBP1Q9H171 429 aa11.18□□□□□ -0.62
CCDC57-209ENST00000483145 DDX43Q9NXZ2 648 aaKnown RBP11.18□□□□□ -0.62
CCDC57-209ENST00000483145 MTRRQ9UBK8 725 aa11.18□□□□□ -0.62
CCDC57-209ENST00000483145 HMGXB4Q9UGU5 601 aa11.18□□□□□ -0.62
CCDC57-209ENST00000483145 CDH9Q9ULB4 789 aa11.18□□□□□ -0.62
CCDC57-209ENST00000483145 SSX2IPQ9Y2D8 614 aa11.18□□□□□ -0.62
CCDC57-209ENST00000483145 MYH10P35580 1976 aa11.17□□□□□ -0.62
CCDC57-209ENST00000483145 TCF20Q9UGU0 1960 aaKnown RBP11.17□□□□□ -0.62
CCDC57-209ENST00000483145 OR6C75A6NL08 312 aa11.17□□□□□ -0.62
CCDC57-209ENST00000483145 A8MXQ7 604 aa11.17□□□□□ -0.62
CCDC57-209ENST00000483145 AKR1B15C9JRZ8 316 aaPredicted RBP11.17□□□□□ -0.62
CCDC57-209ENST00000483145 H7C4K7 107 aa11.17□□□□□ -0.62
CCDC57-209ENST00000483145 TBC1D4O60343 1298 aa11.17□□□□□ -0.62
CCDC57-209ENST00000483145 CCDC172P0C7W6 258 aa11.17□□□□□ -0.62
CCDC57-209ENST00000483145 PNMA6AP0CW24 399 aaPredicted RBP11.17□□□□□ -0.62
CCDC57-209ENST00000483145 BMP1P13497 986 aa11.17□□□□□ -0.62
CCDC57-209ENST00000483145 KRT5P13647 590 aa11.17□□□□□ -0.62
CCDC57-209ENST00000483145 HNRNPH3P31942 346 aaKnown RBP11.17□□□□□ -0.62
CCDC57-209ENST00000483145 KRT9P35527 623 aa11.17□□□□□ -0.62
CCDC57-209ENST00000483145 RAD23BP54727 409 aa11.17□□□□□ -0.62
CCDC57-209ENST00000483145 CREMQ03060 361 aa11.17□□□□□ -0.62
CCDC57-209ENST00000483145 CTXN3Q4LDR2 81 aa11.17□□□□□ -0.62
CCDC57-209ENST00000483145 SFMBT2Q5VUG0 894 aa11.17□□□□□ -0.62
CCDC57-209ENST00000483145 KIAA0319Q5VV43 1072 aa11.17□□□□□ -0.62
CCDC57-209ENST00000483145 KIAA1841Q6NSI8 718 aa11.17□□□□□ -0.62
CCDC57-209ENST00000483145 EP400NLQ6ZTU2 488 aa11.17□□□□□ -0.62
CCDC57-209ENST00000483145 CRYBG2Q8N1P7 616 aa11.17□□□□□ -0.62
CCDC57-209ENST00000483145 SLC4A11Q8NBS3 891 aa11.17□□□□□ -0.62
CCDC57-209ENST00000483145 SPC24Q8NBT2 197 aa11.17□□□□□ -0.62
CCDC57-209ENST00000483145 B3GALNT2Q8NCR0 500 aa11.17□□□□□ -0.62
CCDC57-209ENST00000483145 OR8K1Q8NGG5 319 aa11.17□□□□□ -0.62
CCDC57-209ENST00000483145 OR10T2Q8NGX3 314 aa11.17□□□□□ -0.62
CCDC57-209ENST00000483145 LNX1Q8TBB1 728 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms