RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 BECN1Q14457 450 aa12.3□□□□□ -0.44
CCM2-213ENST00000480658 KNOP1Q1ED39 458 aaKnown RBP12.3□□□□□ -0.44
CCM2-213ENST00000480658 ZNF528Q3MIS6 628 aa12.3□□□□□ -0.44
CCM2-213ENST00000480658 CFAP221Q4G0U5 840 aa12.3□□□□□ -0.44
CCM2-213ENST00000480658 ARHGAP29Q52LW3 1261 aa12.3□□□□□ -0.44
CCM2-213ENST00000480658 WSCD1Q658N2 575 aa12.3□□□□□ -0.44
CCM2-213ENST00000480658 DNAJB7Q7Z6W7 309 aaPredicted RBP12.3□□□□□ -0.44
CCM2-213ENST00000480658 TMC8Q8IU68 726 aa12.3□□□□□ -0.44
CCM2-213ENST00000480658 C1orf210Q8IVY1 113 aa12.3□□□□□ -0.44
CCM2-213ENST00000480658 ADGRF2Q8IZF7 708 aa12.3□□□□□ -0.44
CCM2-213ENST00000480658 PDCL2Q8N4E4 241 aa12.3□□□□□ -0.44
CCM2-213ENST00000480658 FSIP1Q8NA03 581 aa12.3□□□□□ -0.44
CCM2-213ENST00000480658 ATAD1Q8NBU5 361 aa12.3□□□□□ -0.44
CCM2-213ENST00000480658 OR10T2Q8NGX3 314 aa12.3□□□□□ -0.44
CCM2-213ENST00000480658 CSGALNACT1Q8TDX6 532 aa12.3□□□□□ -0.44
CCM2-213ENST00000480658 SPATA32Q96LK8 384 aa12.3□□□□□ -0.44
CCM2-213ENST00000480658 FAM126AQ9BYI3 521 aaPredicted RBP12.3□□□□□ -0.44
CCM2-213ENST00000480658 MTMR12Q9C0I1 747 aa12.3□□□□□ -0.44
CCM2-213ENST00000480658 DNAI2Q9GZS0 605 aa12.3□□□□□ -0.44
CCM2-213ENST00000480658 ATXN3LQ9H3M9 355 aa12.3□□□□□ -0.44
CCM2-213ENST00000480658 C8orf33Q9H7E9 229 aaPredicted RBP12.3□□□□□ -0.44
CCM2-213ENST00000480658 KIF9Q9HAQ2 790 aa12.3□□□□□ -0.44
CCM2-213ENST00000480658 AGPAT3Q9NRZ7 376 aa12.3□□□□□ -0.44
CCM2-213ENST00000480658 EXOC1Q9NV70 894 aa12.3□□□□□ -0.44
CCM2-213ENST00000480658 DDX43Q9NXZ2 648 aaKnown RBP12.3□□□□□ -0.44
CCM2-213ENST00000480658 RCOR1Q9UKL0 485 aa12.3□□□□□ -0.44
CCM2-213ENST00000480658 FBXO4Q9UKT5 387 aa12.3□□□□□ -0.44
CCM2-213ENST00000480658 SNX9Q9Y5X1 595 aa12.3□□□□□ -0.44
CCM2-213ENST00000480658 PIEZO1Q92508 2521 aa12.3□□□□□ -0.44
CCM2-213ENST00000480658 A0A1W2PRU2 124 aa12.29□□□□□ -0.44
CCM2-213ENST00000480658 TULP1O00294 542 aaPredicted RBP12.29□□□□□ -0.44
CCM2-213ENST00000480658 PPEF2O14830 753 aa12.29□□□□□ -0.44
CCM2-213ENST00000480658 CHADO15335 359 aa12.29□□□□□ -0.44
CCM2-213ENST00000480658 OR4Q2P0C623 313 aa12.29□□□□□ -0.44
CCM2-213ENST00000480658 HAPLN1P10915 354 aaPredicted RBP12.29□□□□□ -0.44
CCM2-213ENST00000480658 P4HA1P13674 534 aa12.29□□□□□ -0.44
CCM2-213ENST00000480658 PFKLP17858 780 aa12.29□□□□□ -0.44
CCM2-213ENST00000480658 TNNI1P19237 187 aa12.29□□□□□ -0.44
CCM2-213ENST00000480658 CMA1P23946 247 aa12.29□□□□□ -0.44
CCM2-213ENST00000480658 FCARP24071 287 aa12.29□□□□□ -0.44
CCM2-213ENST00000480658 GABRR2P28476 465 aa12.29□□□□□ -0.44
CCM2-213ENST00000480658 ATICP31939 592 aa12.29□□□□□ -0.44
CCM2-213ENST00000480658 AVPR1AP37288 418 aa12.29□□□□□ -0.44
CCM2-213ENST00000480658 DNM1Q05193 864 aaKnown RBP12.29□□□□□ -0.44
CCM2-213ENST00000480658 EHHADHQ08426 723 aa12.29□□□□□ -0.44
CCM2-213ENST00000480658 FCHO2Q0JRZ9 810 aa12.29□□□□□ -0.44
CCM2-213ENST00000480658 BFSP1Q12934 665 aa12.29□□□□□ -0.44
CCM2-213ENST00000480658 LRRC32Q14392 662 aa12.29□□□□□ -0.44
CCM2-213ENST00000480658 UBXN2BQ14CS0 331 aa12.29□□□□□ -0.44
CCM2-213ENST00000480658 PSMD6Q15008 389 aa12.29□□□□□ -0.44
CCM2-213ENST00000480658 TEAD2Q15562 447 aa12.29□□□□□ -0.44
CCM2-213ENST00000480658 INTS6LQ5JSJ4 861 aaKnown RBP12.29□□□□□ -0.44
CCM2-213ENST00000480658 TANGO2Q6ICL3 276 aa12.29□□□□□ -0.44
CCM2-213ENST00000480658 TPRG1Q6ZUI0 275 aa12.29□□□□□ -0.44
CCM2-213ENST00000480658 SHKBP1Q8TBC3 707 aa12.29□□□□□ -0.44
CCM2-213ENST00000480658 TRMT2BQ96GJ1 504 aaKnown RBP12.29□□□□□ -0.44
CCM2-213ENST00000480658 HPDLQ96IR7 371 aa12.29□□□□□ -0.44
CCM2-213ENST00000480658 PCIF1Q9H4Z3 704 aa12.29□□□□□ -0.44
CCM2-213ENST00000480658 TASP1Q9H6P5 420 aa12.29□□□□□ -0.44
CCM2-213ENST00000480658 PDE11AQ9HCR9 933 aa12.29□□□□□ -0.44
CCM2-213ENST00000480658 LTB4R2Q9NPC1 389 aa12.29□□□□□ -0.44
CCM2-213ENST00000480658 ABI2Q9NYB9 513 aaPredicted RBP12.29□□□□□ -0.44
CCM2-213ENST00000480658 ZDBF2Q9HCK1 2354 aa12.29□□□□□ -0.44
CCM2-213ENST00000480658 ANK1P16157 1881 aa12.29□□□□□ -0.44
CCM2-213ENST00000480658 WDFY4Q6ZS81 3184 aa12.28□□□□□ -0.44
CCM2-213ENST00000480658 LAMTOR5O43504 91 aa12.28□□□□□ -0.44
CCM2-213ENST00000480658 STAU1O95793 577 aaKnown RBP12.28□□□□□ -0.44
CCM2-213ENST00000480658 GDI1P31150 447 aa12.28□□□□□ -0.44
CCM2-213ENST00000480658 CCR2P41597 374 aa12.28□□□□□ -0.44
CCM2-213ENST00000480658 MAGEA11P43364 429 aa12.28□□□□□ -0.44
CCM2-213ENST00000480658 NRLP54845 237 aa12.28□□□□□ -0.44
CCM2-213ENST00000480658 TNNC1P63316 161 aa12.28□□□□□ -0.44
CCM2-213ENST00000480658 TRPC3Q13507 836 aa12.28□□□□□ -0.44
CCM2-213ENST00000480658 VSTM1Q6UX27 236 aa12.28□□□□□ -0.44
CCM2-213ENST00000480658 MAMSTRQ6ZN01 415 aa12.28□□□□□ -0.44
CCM2-213ENST00000480658 SPATA2LQ8IUW3 424 aaPredicted RBP12.28□□□□□ -0.44
CCM2-213ENST00000480658 CELF5Q8N6W0 485 aaKnown RBP12.28□□□□□ -0.44
CCM2-213ENST00000480658 SCFD1Q8WVM8 642 aa12.28□□□□□ -0.44
CCM2-213ENST00000480658 MRPS31Q92665 395 aaKnown RBP12.28□□□□□ -0.44
CCM2-213ENST00000480658 SYAP1Q96A49 352 aaPredicted RBP12.28□□□□□ -0.44
CCM2-213ENST00000480658 TCEAL4Q96EI5 215 aa12.28□□□□□ -0.44
CCM2-213ENST00000480658 CGRRF1Q99675 332 aa12.28□□□□□ -0.44
CCM2-213ENST00000480658 RPP25Q9BUL9 199 aaKnown RBP12.28□□□□□ -0.44
CCM2-213ENST00000480658 LRRC3Q9BY71 257 aa12.28□□□□□ -0.44
CCM2-213ENST00000480658 GTPBP4Q9BZE4 634 aaKnown RBP12.28□□□□□ -0.44
CCM2-213ENST00000480658 DNAJC25Q9H1X3 360 aa12.28□□□□□ -0.44
CCM2-213ENST00000480658 ZNF334Q9HCZ1 680 aaPredicted RBP12.28□□□□□ -0.44
CCM2-213ENST00000480658 DLGAP2Q9P1A6 1054 aa12.28□□□□□ -0.44
CCM2-213ENST00000480658 CDH9Q9ULB4 789 aa12.28□□□□□ -0.44
CCM2-213ENST00000480658 L1RE1Q9UN81 338 aa12.28□□□□□ -0.44
CCM2-213ENST00000480658 SLC27A5Q9Y2P5 690 aa12.28□□□□□ -0.44
CCM2-213ENST00000480658 GOLGA8IPA6NC78 632 aa12.27□□□□□ -0.45
CCM2-213ENST00000480658 GOLGA8JA6NMD2 632 aa12.27□□□□□ -0.45
CCM2-213ENST00000480658 FAM170BA6NMN3 283 aa12.27□□□□□ -0.45
CCM2-213ENST00000480658 HEPACAM2A8MVW5 462 aa12.27□□□□□ -0.45
CCM2-213ENST00000480658 GABRDO14764 452 aa12.27□□□□□ -0.45
CCM2-213ENST00000480658 TRIM66O15016 1216 aa12.27□□□□□ -0.45
CCM2-213ENST00000480658 PI15O43692 258 aa12.27□□□□□ -0.45
CCM2-213ENST00000480658 EXOC3O60645 756 aa12.27□□□□□ -0.45
CCM2-213ENST00000480658 TACC1O75410 805 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms