RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, human

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD6-208	ENST00000480022	TRAF3IP3	Q9Y228	551 aa		11.44	□□□□□ -0.58
CHD6-208	ENST00000480022	TMX2	Q9Y320	296 aa		11.44	□□□□□ -0.58
CHD6-208	ENST00000480022	IGSF9B	Q9UPX0	1349 aa		11.44	□□□□□ -0.58
CHD6-208	ENST00000480022	CCDC160	A6NGH7	325 aa		11.44	□□□□□ -0.58
CHD6-208	ENST00000480022	MIF4GD	A9UHW6	222 aa	Known RBP	11.44	□□□□□ -0.58
CHD6-208	ENST00000480022	PRPF4	O43172	522 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
CHD6-208	ENST00000480022	STRN	O43815	780 aa		11.44	□□□□□ -0.58
CHD6-208	ENST00000480022	PDE5A	O76074	875 aa		11.44	□□□□□ -0.58
CHD6-208	ENST00000480022	SLC18A1	P54219	525 aa		11.44	□□□□□ -0.58
CHD6-208	ENST00000480022	MTMR2	Q13614	643 aa		11.44	□□□□□ -0.58
CHD6-208	ENST00000480022	STAT4	Q14765	748 aa		11.44	□□□□□ -0.58
CHD6-208	ENST00000480022	TMEM53	Q6P2H8	277 aa		11.44	□□□□□ -0.58
CHD6-208	ENST00000480022	KLHDC10	Q6PID8	442 aa		11.44	□□□□□ -0.58
CHD6-208	ENST00000480022	RHBDF2	Q6PJF5	856 aa		11.44	□□□□□ -0.58
CHD6-208	ENST00000480022	NUP93	Q8N1F7	819 aa		11.44	□□□□□ -0.58
CHD6-208	ENST00000480022	SYT2	Q8N9I0	419 aa	Predicted RBP	11.44	□□□□□ -0.58
CHD6-208	ENST00000480022	LNX1	Q8TBB1	728 aa	Predicted RBP	11.44	□□□□□ -0.58
CHD6-208	ENST00000480022	PRICKLE1	Q96MT3	831 aa	Predicted RBP	11.44	□□□□□ -0.58
CHD6-208	ENST00000480022	DNAJC17	Q9NVM6	304 aa	Known RBP	11.44	□□□□□ -0.58
CHD6-208	ENST00000480022	DOCK1	Q14185	1865 aa		11.44	□□□□□ -0.58
CHD6-208	ENST00000480022	HTR3E	A5X5Y0	456 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	WDR46	O15213	610 aa	Known RBP	11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	CCNT1	O60563	726 aa	Known RBP	11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	MAGEC1	O60732	1142 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	CIB2	O75838	187 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	PGM3	O95394	542 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	UQCRB	P14927	111 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	ITIH2	P19823	946 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	PON1	P27169	355 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	RPL5	P46777	297 aa	Known RBP	11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	KCNJ1	P48048	391 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	PPIL2	Q13356	520 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	ZYX	Q15942	572 aa	Known RBP	11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	PLEKHG4	Q58EX7	1191 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	HSP90AA5P	Q58FG0	334 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	KLHL35	Q6PF15	583 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	NET1	Q7Z628	596 aa	Predicted RBP	11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	LRRC6	Q86X45	466 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	PDSS2	Q86YH6	399 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	DAGLB	Q8NCG7	672 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	CYTH2	Q99418	400 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	CREBZF	Q9NS37	354 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	ANKFY1	Q9P2R3	1169 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	HEY2	Q9UBP5	337 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	DCTN4	Q9UJW0	460 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	GRID1	Q9ULK0	1009 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	TDRKH	Q9Y2W6	561 aa	Known RBP	11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	CTDP1	Q9Y5B0	961 aa	Predicted RBP	11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	USP17L10	C9JJH3	530 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	NDC80	O14777	642 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	ZNF157	P51786	506 aa	Predicted RBP	11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	PDE1B	Q01064	536 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	COASY	Q13057	564 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	ADRM1	Q16186	407 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	LETM2	Q2VYF4	491 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	TRMT5	Q32P41	509 aa	Known RBP	11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	FAM26F	Q5R3K3	315 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	RGMB	Q6NW40	437 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	TRABD2A	Q86V40	505 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	ALDH16A1	Q8IZ83	802 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	PNMA1	Q8ND90	353 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	SLC30A5	Q8TAD4	765 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	MAML1	Q92585	1016 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	HSPBAP1	Q96EW2	488 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	WNK4	Q96J92	1243 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	PNMA5	Q96PV4	448 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	EURL	Q9NYK6	297 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	SMG5	Q9UPR3	1016 aa	Known RBP	11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	EFR3B	Q9Y2G0	817 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	TRPM7	Q96QT4	1865 aa		11.43	□□□□□ -0.58
CHD6-208	ENST00000480022	TP73	O15350	636 aa		11.42	□□□□□ -0.58
CHD6-208	ENST00000480022	BUD23	O43709	281 aa	Known RBP	11.42	□□□□□ -0.58
CHD6-208	ENST00000480022	RARB	P10826	455 aa		11.42	□□□□□ -0.58
CHD6-208	ENST00000480022	CPA3	P15088	417 aa		11.42	□□□□□ -0.58
CHD6-208	ENST00000480022	CHN2	P52757	468 aa		11.42	□□□□□ -0.58
CHD6-208	ENST00000480022	BACE1	P56817	501 aa		11.42	□□□□□ -0.58
CHD6-208	ENST00000480022	JAM2	P57087	298 aa		11.42	□□□□□ -0.58
CHD6-208	ENST00000480022	ZBTB16	Q05516	673 aa		11.42	□□□□□ -0.58
CHD6-208	ENST00000480022	DGKZ	Q13574	1117 aa		11.42	□□□□□ -0.58
CHD6-208	ENST00000480022	KRT72	Q14CN4	511 aa		11.42	□□□□□ -0.58
CHD6-208	ENST00000480022	DQX1	Q8TE96	717 aa	Known RBP	11.42	□□□□□ -0.58
CHD6-208	ENST00000480022	ZNF75CP	Q92670	426 aa	Predicted RBP	11.42	□□□□□ -0.58
CHD6-208	ENST00000480022	RAD54L	Q92698	747 aa		11.42	□□□□□ -0.58
CHD6-208	ENST00000480022	KRT35	Q92764	455 aa		11.42	□□□□□ -0.58
CHD6-208	ENST00000480022	TTC25	Q96NG3	672 aa		11.42	□□□□□ -0.58
CHD6-208	ENST00000480022	OSBPL8	Q9BZF1	889 aa		11.42	□□□□□ -0.58
CHD6-208	ENST00000480022	KANSL3	Q9P2N6	904 aa		11.42	□□□□□ -0.58
CHD6-208	ENST00000480022	ALG6	Q9Y672	507 aa		11.42	□□□□□ -0.58
CHD6-208	ENST00000480022	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	11.42	□□□□□ -0.58
CHD6-208	ENST00000480022	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.42	□□□□□ -0.58
CHD6-208	ENST00000480022		F5H6K3	240 aa		11.42	□□□□□ -0.58
CHD6-208	ENST00000480022	USP1	O94782	785 aa		11.42	□□□□□ -0.58
CHD6-208	ENST00000480022	ARFIP2	P53365	341 aa		11.42	□□□□□ -0.58
CHD6-208	ENST00000480022	TBL3	Q12788	808 aa	Known RBP	11.42	□□□□□ -0.58
CHD6-208	ENST00000480022	MAP7D1	Q3KQU3	841 aa		11.42	□□□□□ -0.58
CHD6-208	ENST00000480022	SPRYD7	Q5W111	196 aa		11.42	□□□□□ -0.58
CHD6-208	ENST00000480022	RIPOR1	Q6ZS17	1223 aa		11.42	□□□□□ -0.58
CHD6-208	ENST00000480022	RAPH1	Q70E73	1250 aa		11.42	□□□□□ -0.58
CHD6-208	ENST00000480022	RASAL3	Q86YV0	1011 aa		11.42	□□□□□ -0.58
CHD6-208	ENST00000480022	GLYCTK	Q8IVS8	523 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms