RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 MAPTP10636 758 aaKnown RBP17.44■□□□□ 0.38
DDX56-210ENST00000479440 CEACAM1P13688 526 aa17.44■□□□□ 0.38
DDX56-210ENST00000479440 PLS3P13797 630 aa17.44■□□□□ 0.38
DDX56-210ENST00000479440 SMARCB1Q12824 385 aa17.44■□□□□ 0.38
DDX56-210ENST00000479440 PDGFRLQ15198 375 aa17.44■□□□□ 0.38
DDX56-210ENST00000479440 TRIM68Q6AZZ1 485 aa17.44■□□□□ 0.38
DDX56-210ENST00000479440 C1orf186Q6ZWK4 172 aa17.44■□□□□ 0.38
DDX56-210ENST00000479440 TMEM130Q8N3G9 435 aa17.44■□□□□ 0.38
DDX56-210ENST00000479440 CPA6Q8N4T0 437 aa17.44■□□□□ 0.38
DDX56-210ENST00000479440 IGSF22Q8N9C0 903 aa17.44■□□□□ 0.38
DDX56-210ENST00000479440 TMEM161BQ8NDZ6 487 aa17.44■□□□□ 0.38
DDX56-210ENST00000479440 OR10T2Q8NGX3 314 aa17.44■□□□□ 0.38
DDX56-210ENST00000479440 SPPL2BQ8TCT7 592 aa17.44■□□□□ 0.38
DDX56-210ENST00000479440 C8orf76Q96K31 380 aa17.44■□□□□ 0.38
DDX56-210ENST00000479440 SENP8Q96LD8 212 aa17.44■□□□□ 0.38
DDX56-210ENST00000479440 P2RY13Q9BPV8 354 aa17.44■□□□□ 0.38
DDX56-210ENST00000479440 SLC46A2Q9BY10 475 aa17.44■□□□□ 0.38
DDX56-210ENST00000479440 TMEM9BQ9NQ34 198 aa17.44■□□□□ 0.38
DDX56-210ENST00000479440 EBF1Q9UH73 591 aa17.44■□□□□ 0.38
DDX56-210ENST00000479440 FAM208BQ5VWN6 2430 aa17.44■□□□□ 0.38
DDX56-210ENST00000479440 SPAG17Q6Q759 2223 aa17.44■□□□□ 0.38
DDX56-210ENST00000479440 KHNYNO15037 678 aaKnown RBP17.43■□□□□ 0.38
DDX56-210ENST00000479440 CSRP1P21291 193 aaKnown RBP17.43■□□□□ 0.38
DDX56-210ENST00000479440 GUCY2FP51841 1108 aa17.43■□□□□ 0.38
DDX56-210ENST00000479440 LILRA4P59901 499 aa17.43■□□□□ 0.38
DDX56-210ENST00000479440 DMC1Q14565 340 aa17.43■□□□□ 0.38
DDX56-210ENST00000479440 CCDC26Q8TAB7 109 aa17.43■□□□□ 0.38
DDX56-210ENST00000479440 CHFRQ96EP1 664 aa17.43■□□□□ 0.38
DDX56-210ENST00000479440 TMEM121BQ9BXQ6 578 aaPredicted RBP17.43■□□□□ 0.38
DDX56-210ENST00000479440 ZCWPW1Q9H0M4 648 aa17.43■□□□□ 0.38
DDX56-210ENST00000479440 RPF1Q9H9Y2 349 aaKnown RBP17.43■□□□□ 0.38
DDX56-210ENST00000479440 TDP1Q9NUW8 608 aa17.43■□□□□ 0.38
DDX56-210ENST00000479440 SOBPA7XYQ1 873 aa17.42■□□□□ 0.38
DDX56-210ENST00000479440 CYP11A1P05108 521 aa17.42■□□□□ 0.38
DDX56-210ENST00000479440 ARSAP15289 507 aa17.42■□□□□ 0.38
DDX56-210ENST00000479440 TNFSF9P41273 254 aa17.42■□□□□ 0.38
DDX56-210ENST00000479440 LIG4P49917 911 aa17.42■□□□□ 0.38
DDX56-210ENST00000479440 DGKEP52429 567 aa17.42■□□□□ 0.38
DDX56-210ENST00000479440 SPATA1Q5VX52 437 aa17.42■□□□□ 0.38
DDX56-210ENST00000479440 PMS2CLQ68D20 193 aa17.42■□□□□ 0.38
DDX56-210ENST00000479440 CYP2U1Q7Z449 544 aa17.42■□□□□ 0.38
DDX56-210ENST00000479440 METTL23Q86XA0 190 aa17.42■□□□□ 0.38
DDX56-210ENST00000479440 THEM5Q8N1Q8 247 aa17.42■□□□□ 0.38
DDX56-210ENST00000479440 MAB21L3Q8N8X9 362 aa17.42■□□□□ 0.38
DDX56-210ENST00000479440 GIPC2Q8TF65 315 aa17.42■□□□□ 0.38
DDX56-210ENST00000479440 MRPS31Q92665 395 aaKnown RBP17.42■□□□□ 0.38
DDX56-210ENST00000479440 USP13Q92995 863 aaPredicted RBP17.42■□□□□ 0.38
DDX56-210ENST00000479440 WASF3Q9UPY6 502 aa17.42■□□□□ 0.38
DDX56-210ENST00000479440 CCL26Q9Y258 94 aa17.42■□□□□ 0.38
DDX56-210ENST00000479440 EML5Q05BV3 1969 aa17.42■□□□□ 0.38
DDX56-210ENST00000479440 CNOT1A5YKK6 2376 aaKnown RBP17.42■□□□□ 0.38
DDX56-210ENST00000479440 OTOL1A6NHN0 477 aaPredicted RBP17.41■□□□□ 0.38
DDX56-210ENST00000479440 SFI1A8K8P3 1242 aa17.41■□□□□ 0.38
DDX56-210ENST00000479440 LACTBL1A8MY62 500 aa17.41■□□□□ 0.38
DDX56-210ENST00000479440 PPEF2O14830 753 aa17.41■□□□□ 0.38
DDX56-210ENST00000479440 DCLK1O15075 740 aa17.41■□□□□ 0.38
DDX56-210ENST00000479440 SPINK2P20155 84 aa17.41■□□□□ 0.38
DDX56-210ENST00000479440 ZNF268Q14587 947 aaPredicted RBP17.41■□□□□ 0.38
DDX56-210ENST00000479440 ENOX2Q16206 610 aaKnown RBP17.41■□□□□ 0.38
DDX56-210ENST00000479440 USP39Q53GS9 565 aaKnown RBP17.41■□□□□ 0.38
DDX56-210ENST00000479440 CD302Q8IX05 232 aa17.41■□□□□ 0.38
DDX56-210ENST00000479440 TSTD1Q8NFU3 115 aa17.41■□□□□ 0.38
DDX56-210ENST00000479440 ZCCHC14Q8WYQ9 949 aaKnown RBP17.41■□□□□ 0.38
DDX56-210ENST00000479440 GATA6Q92908 595 aa17.41■□□□□ 0.38
DDX56-210ENST00000479440 CD101Q93033 1021 aa17.41■□□□□ 0.38
DDX56-210ENST00000479440 ATP2A3Q93084 1043 aa17.41■□□□□ 0.38
DDX56-210ENST00000479440 SCNM1Q9BWG6 230 aa17.41■□□□□ 0.38
DDX56-210ENST00000479440 HAPLN2Q9GZV7 340 aa17.41■□□□□ 0.38
DDX56-210ENST00000479440 POLR3BQ9NW08 1133 aaPredicted RBP17.41■□□□□ 0.38
DDX56-210ENST00000479440 ABI2Q9NYB9 513 aaPredicted RBP17.41■□□□□ 0.38
DDX56-210ENST00000479440 KCND2Q9NZV8 630 aa17.41■□□□□ 0.38
DDX56-210ENST00000479440 LARSQ9P2J5 1176 aaKnown RBP17.41■□□□□ 0.38
DDX56-210ENST00000479440 TBX20Q9UMR3 447 aa17.41■□□□□ 0.38
DDX56-210ENST00000479440 CACNA1GO43497 2377 aa17.41■□□□□ 0.38
DDX56-210ENST00000479440 LAD1O00515 517 aa17.4■□□□□ 0.38
DDX56-210ENST00000479440 HNRNPDLO14979 420 aaKnown RBP17.4■□□□□ 0.38
DDX56-210ENST00000479440 OGTO15294 1046 aa17.4■□□□□ 0.38
DDX56-210ENST00000479440 HAPLN1P10915 354 aaPredicted RBP17.4■□□□□ 0.38
DDX56-210ENST00000479440 HOXB3P14651 431 aaPredicted RBP17.4■□□□□ 0.38
DDX56-210ENST00000479440 GJA4P35212 333 aa17.4■□□□□ 0.38
DDX56-210ENST00000479440 GALK1P51570 392 aa17.4■□□□□ 0.38
DDX56-210ENST00000479440 NLRP12P59046 1061 aa17.4■□□□□ 0.38
DDX56-210ENST00000479440 RAD51AP2Q09MP3 1159 aa17.4■□□□□ 0.38
DDX56-210ENST00000479440 PSMD2Q13200 908 aa17.4■□□□□ 0.38
DDX56-210ENST00000479440 NBR1Q14596 966 aa17.4■□□□□ 0.38
DDX56-210ENST00000479440 MTF1Q14872 753 aa17.4■□□□□ 0.38
DDX56-210ENST00000479440 C9orf57Q5W0N0 161 aa17.4■□□□□ 0.38
DDX56-210ENST00000479440 C4orf32Q8N8J7 132 aa17.4■□□□□ 0.38
DDX56-210ENST00000479440 SRRM3A6NNA2 597 aaPredicted RBP17.39■□□□□ 0.37
DDX56-210ENST00000479440 PP2D1A8MPX8 630 aa17.39■□□□□ 0.37
DDX56-210ENST00000479440 F11P03951 625 aa17.39■□□□□ 0.37
DDX56-210ENST00000479440 CSH1P0DML2 217 aa17.39■□□□□ 0.37
DDX56-210ENST00000479440 CSH2P0DML3 217 aa17.39■□□□□ 0.37
DDX56-210ENST00000479440 SCP2P22307 547 aa17.39■□□□□ 0.37
DDX56-210ENST00000479440 NMT1P30419 496 aaKnown RBP17.39■□□□□ 0.37
DDX56-210ENST00000479440 IFNAR2P48551 515 aa17.39■□□□□ 0.37
DDX56-210ENST00000479440 NCKAP1LP55160 1127 aa17.39■□□□□ 0.37
DDX56-210ENST00000479440 TMEM132DQ14C87 1099 aa17.39■□□□□ 0.37
DDX56-210ENST00000479440 JADE1Q6IE81 842 aa17.39■□□□□ 0.37
DDX56-210ENST00000479440 KCNK18Q7Z418 384 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms