RNA–Protein interactions for RNA: ENST00000478196.6

RPS27A-208, Transcript of ribosomal protein S27a, human

TSL 2

Gene RPS27A, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS27A-208	ENST00000478196	RAB11FIP3	O75154	756 aa		4.86	□□□□□ -1.63
RPS27A-208	ENST00000478196	TYRP1	P17643	537 aa		4.86	□□□□□ -1.63
RPS27A-208	ENST00000478196	PRDX5	P30044	214 aa		4.86	□□□□□ -1.63
RPS27A-208	ENST00000478196	C1QTNF8	P60827	252 aa		4.86	□□□□□ -1.63
RPS27A-208	ENST00000478196	CHAF1A	Q13111	956 aa	Predicted RBP	4.86	□□□□□ -1.63
RPS27A-208	ENST00000478196	OS9	Q13438	667 aa	Predicted RBP	4.86	□□□□□ -1.63
RPS27A-208	ENST00000478196	FAM214A	Q32MH5	1076 aa		4.86	□□□□□ -1.63
RPS27A-208	ENST00000478196	HSP90AB4P	Q58FF6	505 aa		4.86	□□□□□ -1.63
RPS27A-208	ENST00000478196	ZC3H12B	Q5HYM0	836 aa	Known RBP	4.86	□□□□□ -1.63
RPS27A-208	ENST00000478196	MICALCL	Q6ZW33	695 aa		4.86	□□□□□ -1.63
RPS27A-208	ENST00000478196	PNMA8A	Q86V59	439 aa	Predicted RBP	4.86	□□□□□ -1.63
RPS27A-208	ENST00000478196	ERC1	Q8IUD2	1116 aa		4.86	□□□□□ -1.63
RPS27A-208	ENST00000478196	SMC5	Q8IY18	1101 aa		4.86	□□□□□ -1.63
RPS27A-208	ENST00000478196	CMTR2	Q8IYT2	770 aa	Known RBP	4.86	□□□□□ -1.63
RPS27A-208	ENST00000478196	OR52N2	Q8NGI0	321 aa		4.86	□□□□□ -1.63
RPS27A-208	ENST00000478196	OTUD7A	Q8TE49	926 aa	Predicted RBP	4.86	□□□□□ -1.63
RPS27A-208	ENST00000478196	LINC00476	Q8WZB0	136 aa		4.86	□□□□□ -1.63
RPS27A-208	ENST00000478196	KIF1BP	Q96EK5	621 aa		4.86	□□□□□ -1.63
RPS27A-208	ENST00000478196	PRMT6	Q96LA8	375 aa	Predicted RBP	4.86	□□□□□ -1.63
RPS27A-208	ENST00000478196	UIMC1	Q96RL1	719 aa		4.86	□□□□□ -1.63
RPS27A-208	ENST00000478196	OSBPL6	Q9BZF3	934 aa		4.86	□□□□□ -1.63
RPS27A-208	ENST00000478196	CCDC113	Q9H0I3	377 aa		4.86	□□□□□ -1.63
RPS27A-208	ENST00000478196	EPC1	Q9H2F5	836 aa		4.86	□□□□□ -1.63
RPS27A-208	ENST00000478196	MYOZ2	Q9NPC6	264 aa		4.86	□□□□□ -1.63
RPS27A-208	ENST00000478196	ACSS2	Q9NR19	701 aa		4.86	□□□□□ -1.63
RPS27A-208	ENST00000478196	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	4.86	□□□□□ -1.63
RPS27A-208	ENST00000478196	SIPA1L1	O43166	1804 aa		4.86	□□□□□ -1.63
RPS27A-208	ENST00000478196	OTOF	Q9HC10	1997 aa		4.85	□□□□□ -1.63
RPS27A-208	ENST00000478196	PROB1	E7EW31	1015 aa		4.85	□□□□□ -1.63
RPS27A-208	ENST00000478196	WNT10B	O00744	389 aa		4.85	□□□□□ -1.63
RPS27A-208	ENST00000478196	ZNF185	O15231	689 aa		4.85	□□□□□ -1.63
RPS27A-208	ENST00000478196	DNAJC6	O75061	913 aa		4.85	□□□□□ -1.63
RPS27A-208	ENST00000478196	FSBP	O95073	299 aa		4.85	□□□□□ -1.63
RPS27A-208	ENST00000478196	C1R	P00736	705 aa		4.85	□□□□□ -1.63
RPS27A-208	ENST00000478196	HKR1	P10072	659 aa		4.85	□□□□□ -1.63
RPS27A-208	ENST00000478196	MMP14	P50281	582 aa		4.85	□□□□□ -1.63
RPS27A-208	ENST00000478196	KIF11	P52732	1056 aa		4.85	□□□□□ -1.63
RPS27A-208	ENST00000478196	FAM189B	P81408	668 aa		4.85	□□□□□ -1.63
RPS27A-208	ENST00000478196	PRAMEF9	Q5VWM5	478 aa		4.85	□□□□□ -1.63
RPS27A-208	ENST00000478196	CST9	Q5W186	159 aa		4.85	□□□□□ -1.63
RPS27A-208	ENST00000478196	APOBEC3H	Q6NTF7	200 aa	Known RBP	4.85	□□□□□ -1.63
RPS27A-208	ENST00000478196	AACS	Q86V21	672 aa		4.85	□□□□□ -1.63
RPS27A-208	ENST00000478196	C16orf71	Q8IYS4	520 aa	Predicted RBP	4.85	□□□□□ -1.63
RPS27A-208	ENST00000478196	LILRA3	Q8N6C8	439 aa	Predicted RBP	4.85	□□□□□ -1.63
RPS27A-208	ENST00000478196	IGSF22	Q8N9C0	903 aa		4.85	□□□□□ -1.63
RPS27A-208	ENST00000478196	SPATA5	Q8NB90	893 aa		4.85	□□□□□ -1.63
RPS27A-208	ENST00000478196	SMC1B	Q8NDV3	1235 aa		4.85	□□□□□ -1.63
RPS27A-208	ENST00000478196	WDR66	Q8TBY9	1149 aa		4.85	□□□□□ -1.63
RPS27A-208	ENST00000478196	TBC1D22A	Q8WUA7	517 aa		4.85	□□□□□ -1.63
RPS27A-208	ENST00000478196	TUBGCP5	Q96RT8	1024 aa		4.85	□□□□□ -1.63
RPS27A-208	ENST00000478196	LRRCC1	Q9C099	1032 aa		4.85	□□□□□ -1.63
RPS27A-208	ENST00000478196	AKIP1	Q9NQ31	210 aa		4.85	□□□□□ -1.63
RPS27A-208	ENST00000478196	PIH1D3	Q9NQM4	214 aa	Known RBP	4.85	□□□□□ -1.63
RPS27A-208	ENST00000478196	TRPM5	Q9NZQ8	1165 aa		4.85	□□□□□ -1.63
RPS27A-208	ENST00000478196	SCAF8	Q9UPN6	1271 aa	Known RBP	4.85	□□□□□ -1.63
RPS27A-208	ENST00000478196	MYH1	P12882	1939 aa		4.85	□□□□□ -1.63
RPS27A-208	ENST00000478196	BAZ2A	Q9UIF9	1905 aa	Known RBP	4.85	□□□□□ -1.63
RPS27A-208	ENST00000478196	LAMB1	P07942	1786 aa		4.84	□□□□□ -1.63
RPS27A-208	ENST00000478196	RFX7	Q2KHR2	1363 aa		4.84	□□□□□ -1.63
RPS27A-208	ENST00000478196	GAK	O14976	1311 aa		4.84	□□□□□ -1.63
RPS27A-208	ENST00000478196	ADM5	C9JUS6	153 aa		4.84	□□□□□ -1.63
RPS27A-208	ENST00000478196	CYP17A1	P05093	508 aa		4.84	□□□□□ -1.63
RPS27A-208	ENST00000478196	UQCRFS1P1	P0C7P4	283 aa		4.84	□□□□□ -1.63
RPS27A-208	ENST00000478196	ATP5J	P18859	108 aa		4.84	□□□□□ -1.63
RPS27A-208	ENST00000478196	APOBEC3A	P31941	199 aa	Predicted RBP	4.84	□□□□□ -1.63
RPS27A-208	ENST00000478196	CXCR5	P32302	372 aa		4.84	□□□□□ -1.63
RPS27A-208	ENST00000478196	BMPR1A	P36894	532 aa		4.84	□□□□□ -1.63
RPS27A-208	ENST00000478196	PTTG1IP	P53801	180 aa		4.84	□□□□□ -1.63
RPS27A-208	ENST00000478196	SEC24C	P53992	1094 aa		4.84	□□□□□ -1.63
RPS27A-208	ENST00000478196	NUCB1	Q02818	461 aa		4.84	□□□□□ -1.63
RPS27A-208	ENST00000478196	MECOM	Q03112	1051 aa		4.84	□□□□□ -1.63
RPS27A-208	ENST00000478196	CFAP100	Q494V2	611 aa		4.84	□□□□□ -1.63
RPS27A-208	ENST00000478196	TRIM61	Q5EBN2	209 aa		4.84	□□□□□ -1.63
RPS27A-208	ENST00000478196	TSHZ3	Q63HK5	1081 aa		4.84	□□□□□ -1.63
RPS27A-208	ENST00000478196	GDF7	Q7Z4P5	450 aa		4.84	□□□□□ -1.63
RPS27A-208	ENST00000478196	ADGRA1	Q86SQ6	560 aa		4.84	□□□□□ -1.63
RPS27A-208	ENST00000478196	CNTROB	Q8N137	903 aa		4.84	□□□□□ -1.63
RPS27A-208	ENST00000478196	CLASRP	Q8N2M8	674 aa	Known RBP	4.84	□□□□□ -1.63
RPS27A-208	ENST00000478196	NSUN4	Q96CB9	384 aa	Known RBP	4.84	□□□□□ -1.63
RPS27A-208	ENST00000478196	EDC3	Q96F86	508 aa	Known RBP	4.84	□□□□□ -1.63
RPS27A-208	ENST00000478196	SCLY	Q96I15	445 aa		4.84	□□□□□ -1.63
RPS27A-208	ENST00000478196	SPATA5L1	Q9BVQ7	753 aa		4.84	□□□□□ -1.63
RPS27A-208	ENST00000478196	GLIS2	Q9BZE0	524 aa	Predicted RBP	4.84	□□□□□ -1.63
RPS27A-208	ENST00000478196	ENKD1	Q9H0I2	346 aa		4.84	□□□□□ -1.63
RPS27A-208	ENST00000478196	GNL3L	Q9NVN8	582 aa	Known RBP	4.84	□□□□□ -1.63
RPS27A-208	ENST00000478196	DDX60L	Q5H9U9	1706 aa	Known RBP	4.83	□□□□□ -1.64
RPS27A-208	ENST00000478196	SSC5D	A1L4H1	1573 aa		4.83	□□□□□ -1.64
RPS27A-208	ENST00000478196	CNTNAP1	P78357	1384 aa		4.83	□□□□□ -1.64
RPS27A-208	ENST00000478196	GPR75-ASB3	A0A0A6YYF3	556 aa		4.83	□□□□□ -1.64
RPS27A-208	ENST00000478196	TCRBV16S1A1N1	A0A5B0	115 aa		4.83	□□□□□ -1.64
RPS27A-208	ENST00000478196	FRAT2	O75474	233 aa	Predicted RBP	4.83	□□□□□ -1.64
RPS27A-208	ENST00000478196	KRT37	O76014	449 aa		4.83	□□□□□ -1.64
RPS27A-208	ENST00000478196	NCR1	O76036	304 aa		4.83	□□□□□ -1.64
RPS27A-208	ENST00000478196	NDUFA10	O95299	355 aa		4.83	□□□□□ -1.64
RPS27A-208	ENST00000478196	IFIT2	P09913	472 aa	Known RBP	4.83	□□□□□ -1.64
RPS27A-208	ENST00000478196	HSPA6	P17066	643 aa		4.83	□□□□□ -1.64
RPS27A-208	ENST00000478196	RHBDL3	P58872	404 aa		4.83	□□□□□ -1.64
RPS27A-208	ENST00000478196	BLOC1S1	P78537	153 aa		4.83	□□□□□ -1.64
RPS27A-208	ENST00000478196	FOXI1	Q12951	378 aa		4.83	□□□□□ -1.64
RPS27A-208	ENST00000478196	DLGAP5	Q15398	846 aa		4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms