RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 LOC285556D6RIA3 1793 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 RLFQ13129 1914 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 PFASO15067 1338 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 ZNF541Q9H0D2 1346 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 ANKRD62A6NC57 917 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 TMCO5BA8MYB1 307 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 K7ENM7 598 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 WDR46O15213 610 aaKnown RBP5.31□□□□□ -1.56
SF3B6-202ENST00000478050 PMM2O15305 246 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 RAD51CO43502 376 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 EXOC3O60645 756 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 HIP1RO75146 1068 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 GLI1P08151 1106 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 ZBTB48P10074 688 aaPredicted RBP5.31□□□□□ -1.56
SF3B6-202ENST00000478050 ADH5P11766 374 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 TNFAIP3P21580 790 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 GNA15P30679 374 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 HSPA9P38646 679 aaKnown RBP5.31□□□□□ -1.56
SF3B6-202ENST00000478050 CARSP49589 748 aaKnown RBP5.31□□□□□ -1.56
SF3B6-202ENST00000478050 DNA2P51530 1060 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 HADHBP55084 474 aaKnown RBP5.31□□□□□ -1.56
SF3B6-202ENST00000478050 UBXN2AP68543 259 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 BNIP3Q12983 259 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 MAPK7Q13164 816 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 KIF22Q14807 665 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 TCEAL1Q15170 157 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 ZC2HC1CQ53FD0 456 aaPredicted RBP5.31□□□□□ -1.56
SF3B6-202ENST00000478050 GJB7Q6PEY0 223 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 USP50Q70EL3 339 aaPredicted RBP5.31□□□□□ -1.56
SF3B6-202ENST00000478050 INTS8Q75QN2 995 aaKnown RBP5.31□□□□□ -1.56
SF3B6-202ENST00000478050 MAATS1Q7Z4T9 603 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 VN1R5Q7Z5H4 357 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 SRLQ86TD4 932 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 NT5DC3Q86UY8 548 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 RHOT2Q8IXI1 618 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 IQCKQ8N0W5 287 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 METTL13Q8N6R0 699 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 AGBL3Q8NEM8 1001 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 ASAP3Q8TDY4 903 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 IFT81Q8WYA0 676 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 RIN2Q8WYP3 895 aaPredicted RBP5.31□□□□□ -1.56
SF3B6-202ENST00000478050 LPAR1Q92633 364 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 LRRC45Q96CN5 670 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 HVCN1Q96D96 273 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 HES6Q96HZ4 224 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 CCDC43Q96MW1 224 aaKnown RBP5.31□□□□□ -1.56
SF3B6-202ENST00000478050 ZIM3Q96PE6 472 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 NAP1L3Q99457 506 aaPredicted RBP5.31□□□□□ -1.56
SF3B6-202ENST00000478050 SYT11Q9BT88 431 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 CAPS2Q9BXY5 557 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 ST6GALNAC4Q9H4F1 302 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 VEZTQ9HBM0 779 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 FAM114A2Q9NRY5 505 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 TBC1D22BQ9NU19 505 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 MTMR10Q9NXD2 777 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 TCEAL9Q9UHQ7 104 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 CCPG1Q9ULG6 757 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 TTC7AQ9ULT0 858 aaPredicted RBP5.31□□□□□ -1.56
SF3B6-202ENST00000478050 NFU1Q9UMS0 254 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 PACSIN2Q9UNF0 486 aaPredicted RBP5.31□□□□□ -1.56
SF3B6-202ENST00000478050 RRP15Q9Y3B9 282 aaKnown RBP5.31□□□□□ -1.56
SF3B6-202ENST00000478050 NR2E3Q9Y5X4 410 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 UBIAD1Q9Y5Z9 338 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 ACTL7BQ9Y614 415 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 MKI67P46013 3256 aaKnown RBP5.31□□□□□ -1.56
SF3B6-202ENST00000478050 COL4A5P29400 1685 aa5.31□□□□□ -1.56
SF3B6-202ENST00000478050 GOLGA6L10A0A0M3HER8 536 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 GOLGA6L10A6NI86 522 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 SRRM3A6NNA2 597 aaPredicted RBP5.3□□□□□ -1.56
SF3B6-202ENST00000478050 MIF4GDA9UHW6 222 aaKnown RBP5.3□□□□□ -1.56
SF3B6-202ENST00000478050 HMGB1P1B2RPK0 211 aaPredicted RBP5.3□□□□□ -1.56
SF3B6-202ENST00000478050 DDX39AO00148 427 aaKnown RBP5.3□□□□□ -1.56
SF3B6-202ENST00000478050 KRIT1O00522 736 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 EIF1AYO14602 144 aaKnown RBP5.3□□□□□ -1.56
SF3B6-202ENST00000478050 EIF3HO15372 352 aaKnown RBP eCLIP5.3□□□□□ -1.56
SF3B6-202ENST00000478050 DKC1O60832 514 aaKnown RBP eCLIP5.3□□□□□ -1.56
SF3B6-202ENST00000478050 RAD17O75943 681 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 GGPS1O95749 300 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 TRIM49P0CI25 452 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 TRIM49CP0CI26 452 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 PLS3P13797 630 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 FUT4P22083 530 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 QARSP47897 775 aaKnown RBP5.3□□□□□ -1.56
SF3B6-202ENST00000478050 ZNF157P51786 506 aaPredicted RBP5.3□□□□□ -1.56
SF3B6-202ENST00000478050 VAMP7P51809 220 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 JAK3P52333 1124 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 GNGT1P63211 74 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 MRPS25P82663 173 aaKnown RBP5.3□□□□□ -1.56
SF3B6-202ENST00000478050 PPATQ06203 517 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 ENPEPQ07075 957 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 HLTFQ14527 1009 aaKnown RBP eCLIP5.3□□□□□ -1.56
SF3B6-202ENST00000478050 COG2Q14746 738 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 ZYXQ15942 572 aaKnown RBP5.3□□□□□ -1.56
SF3B6-202ENST00000478050 ARHGAP44Q17R89 818 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 TKFCQ3LXA3 575 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 CYP27C1Q4G0S4 372 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 CBWD6Q4V339 395 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 EPC2Q52LR7 807 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 TTMPQ5BVD1 217 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 CBWD3Q5JTY5 395 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms