RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 UCHL3P15374 230 aa21.3■■□□□ 1
ACTB-210ENST00000477812 RFX1P22670 979 aa21.3■■□□□ 1
ACTB-210ENST00000477812 ACAT1P24752 427 aaKnown RBP21.3■■□□□ 1
ACTB-210ENST00000477812 GNL1P36915 607 aaPredicted RBP21.3■■□□□ 1
ACTB-210ENST00000477812 NDUFV1P49821 464 aa21.3■■□□□ 1
ACTB-210ENST00000477812 NDST1P52848 882 aa21.3■■□□□ 1
ACTB-210ENST00000477812 ROR1Q01973 937 aa21.3■■□□□ 1
ACTB-210ENST00000477812 UVSSAQ2YD98 709 aa21.3■■□□□ 1
ACTB-210ENST00000477812 ENOSF1Q7L5Y1 443 aa21.3■■□□□ 1
ACTB-210ENST00000477812 UNC93AQ86WB7 457 aa21.3■■□□□ 1
ACTB-210ENST00000477812 DEFB123Q8N688 67 aa21.3■■□□□ 1
ACTB-210ENST00000477812 CDX2Q99626 313 aaPredicted RBP21.3■■□□□ 1
ACTB-210ENST00000477812 SNX25Q9H3E2 840 aa21.3■■□□□ 1
ACTB-210ENST00000477812 CNTN6Q9UQ52 1028 aa21.3■■□□□ 1
ACTB-210ENST00000477812 CD58P19256 250 aa21.29■■□□□ 1
ACTB-210ENST00000477812 PCSK1P29120 753 aa21.29■■□□□ 1
ACTB-210ENST00000477812 OR1D2P34982 312 aa21.29■■□□□ 1
ACTB-210ENST00000477812 RAB33AQ14088 237 aa21.29■■□□□ 1
ACTB-210ENST00000477812 CCDC142Q17RM4 750 aa21.29■■□□□ 1
ACTB-210ENST00000477812 INTS6LQ5JSJ4 861 aaKnown RBP21.29■■□□□ 1
ACTB-210ENST00000477812 LRRTM3Q86VH5 581 aa21.29■■□□□ 1
ACTB-210ENST00000477812 THEM5Q8N1Q8 247 aa21.29■■□□□ 1
ACTB-210ENST00000477812 TTC39CQ8N584 583 aa21.29■■□□□ 1
ACTB-210ENST00000477812 OR6B3Q8NGW1 331 aa21.29■■□□□ 1
ACTB-210ENST00000477812 SHC3Q92529 594 aa21.29■■□□□ 1
ACTB-210ENST00000477812 FAM81BQ96LP2 452 aa21.29■■□□□ 1
ACTB-210ENST00000477812 EMILIN2Q9BXX0 1053 aa21.29■■□□□ 1
ACTB-210ENST00000477812 GPR88Q9GZN0 384 aa21.29■■□□□ 1
ACTB-210ENST00000477812 ELOVL4Q9GZR5 314 aa21.29■■□□□ 1
ACTB-210ENST00000477812 DPEP3Q9H4B8 488 aa21.29■■□□□ 1
ACTB-210ENST00000477812 NSUN3Q9H649 340 aaKnown RBP21.29■■□□□ 1
ACTB-210ENST00000477812 CRTAC1Q9NQ79 661 aa21.29■■□□□ 1
ACTB-210ENST00000477812 DNAJC12Q9UKB3 198 aa21.29■■□□□ 1
ACTB-210ENST00000477812 REV3LO60673 3130 aa21.28■■□□□ 1
ACTB-210ENST00000477812 FSD2A1L4K1 749 aa21.28■■□□□ 1
ACTB-210ENST00000477812 WDR27A2RRH5 827 aa21.28■■□□□ 1
ACTB-210ENST00000477812 A8MXQ7 604 aa21.28■■□□□ 1
ACTB-210ENST00000477812 CLASP2O75122 1294 aaKnown RBP21.28■■□□□ 1
ACTB-210ENST00000477812 ATP2C2O75185 946 aa21.28■■□□□ 1
ACTB-210ENST00000477812 VNN2O95498 520 aa21.28■■□□□ 1
ACTB-210ENST00000477812 OR4Q2P0C623 313 aa21.28■■□□□ 1
ACTB-210ENST00000477812 ZNF132P52740 706 aa21.28■■□□□ 1
ACTB-210ENST00000477812 MFAP3P55082 362 aa21.28■■□□□ 1
ACTB-210ENST00000477812 DUSP6Q16828 381 aa21.28■■□□□ 1
ACTB-210ENST00000477812 SMYD5Q6GMV2 418 aa21.28■■□□□ 1
ACTB-210ENST00000477812 FAM171BQ6P995 826 aa21.28■■□□□ 1
ACTB-210ENST00000477812 MYLIPQ8WY64 445 aa21.28■■□□□ 1
ACTB-210ENST00000477812 SYT15Q9BQS2 421 aa21.28■■□□□ 1
ACTB-210ENST00000477812 TTYH3Q9C0H2 523 aa21.28■■□□□ 1
ACTB-210ENST00000477812 CDH9Q9ULB4 789 aa21.28■■□□□ 1
ACTB-210ENST00000477812 DAAM1Q9Y4D1 1078 aa21.28■■□□□ 1
ACTB-210ENST00000477812 CBFA2T2O43439 604 aa21.27■■□□□ 1
ACTB-210ENST00000477812 ABLIM3O94929 683 aa21.27■■□□□ 1
ACTB-210ENST00000477812 ADH1AP07327 375 aa21.27■■□□□ 1
ACTB-210ENST00000477812 PDGFRBP09619 1106 aa21.27■■□□□ 1
ACTB-210ENST00000477812 RAD23BP54727 409 aa21.27■■□□□ 1
ACTB-210ENST00000477812 PSMC1P62191 440 aaKnown RBP21.27■■□□□ 1
ACTB-210ENST00000477812 YWHAEP62258 255 aaKnown RBP21.27■■□□□ 1
ACTB-210ENST00000477812 GPR17Q13304 367 aa21.27■■□□□ 1
ACTB-210ENST00000477812 ORC1Q13415 861 aa21.27■■□□□ 1
ACTB-210ENST00000477812 KCNC3Q14003 757 aa21.27■■□□□ 1
ACTB-210ENST00000477812 TCEAL5Q5H9L2 206 aa21.27■■□□□ 1
ACTB-210ENST00000477812 LILRA6Q6PI73 481 aa21.27■■□□□ 1
ACTB-210ENST00000477812 CRYBG2Q8N1P7 616 aa21.27■■□□□ 1
ACTB-210ENST00000477812 B3GALNT2Q8NCR0 500 aa21.27■■□□□ 1
ACTB-210ENST00000477812 SLC22A17Q8WUG5 538 aa21.27■■□□□ 1
ACTB-210ENST00000477812 TMLHEQ9NVH6 421 aa21.27■■□□□ 1
ACTB-210ENST00000477812 PLXNA3P51805 1871 aa21.26■□□□□ 0.99
ACTB-210ENST00000477812 MYBPHLA2RUH7 354 aa21.26■□□□□ 0.99
ACTB-210ENST00000477812 PER2O15055 1255 aa21.26■□□□□ 0.99
ACTB-210ENST00000477812 C1RP00736 705 aa21.26■□□□□ 0.99
ACTB-210ENST00000477812 CA8P35219 290 aa21.26■□□□□ 0.99
ACTB-210ENST00000477812 CLCN4P51793 760 aa21.26■□□□□ 0.99
ACTB-210ENST00000477812 JAM2P57087 298 aa21.26■□□□□ 0.99
ACTB-210ENST00000477812 POLR2FP61218 127 aaKnown RBP21.26■□□□□ 0.99
ACTB-210ENST00000477812 TSPY1Q01534 308 aa21.26■□□□□ 0.99
ACTB-210ENST00000477812 HYAL1Q12794 435 aa21.26■□□□□ 0.99
ACTB-210ENST00000477812 GLYCTKQ8IVS8 523 aa21.26■□□□□ 0.99
ACTB-210ENST00000477812 SLC4A11Q8NBS3 891 aa21.26■□□□□ 0.99
ACTB-210ENST00000477812 VN1R2Q8NFZ6 395 aa21.26■□□□□ 0.99
ACTB-210ENST00000477812 NEK11Q8NG66 645 aa21.26■□□□□ 0.99
ACTB-210ENST00000477812 GAS2L1Q99501 681 aaPredicted RBP21.26■□□□□ 0.99
ACTB-210ENST00000477812 LPIN3Q9BQK8 851 aa21.26■□□□□ 0.99
ACTB-210ENST00000477812 NT5C1AQ9BXI3 368 aa21.26■□□□□ 0.99
ACTB-210ENST00000477812 TLE6Q9H808 572 aa21.26■□□□□ 0.99
ACTB-210ENST00000477812 ITIH6Q6UXX5 1313 aa21.26■□□□□ 0.99
ACTB-210ENST00000477812 F8VZ95 297 aa21.25■□□□□ 0.99
ACTB-210ENST00000477812 RNF225M0QZC1 329 aaPredicted RBP21.25■□□□□ 0.99
ACTB-210ENST00000477812 TGM5O43548 720 aa21.25■□□□□ 0.99
ACTB-210ENST00000477812 TPM3P06753 285 aa21.25■□□□□ 0.99
ACTB-210ENST00000477812 PTPN1P18031 435 aaKnown RBP21.25■□□□□ 0.99
ACTB-210ENST00000477812 IGFBP4P22692 258 aa21.25■□□□□ 0.99
ACTB-210ENST00000477812 GTF2F1P35269 517 aaKnown RBP eCLIP21.25■□□□□ 0.992e-13■■□□□ 12.1
ACTB-210ENST00000477812 NRIP1P48552 1158 aa21.25■□□□□ 0.99
ACTB-210ENST00000477812 DRAP1Q14919 205 aaPredicted RBP21.25■□□□□ 0.99
ACTB-210ENST00000477812 COL19A1Q14993 1142 aa21.25■□□□□ 0.99
ACTB-210ENST00000477812 ARHGAP44Q17R89 818 aa21.25■□□□□ 0.99
ACTB-210ENST00000477812 FIGNQ5HY92 759 aa21.25■□□□□ 0.99
ACTB-210ENST00000477812 RNF19BQ6ZMZ0 732 aa21.25■□□□□ 0.99
ACTB-210ENST00000477812 ACOT1Q86TX2 421 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms