RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 SNX25Q9H3E2 840 aa16.38■□□□□ 0.21
SEC13-215ENST00000477547 CYP3A43Q9HB55 503 aa16.38■□□□□ 0.21
SEC13-215ENST00000477547 NGRNQ9NPE2 291 aaKnown RBP16.38■□□□□ 0.21
SEC13-215ENST00000477547 DDX43Q9NXZ2 648 aaKnown RBP16.38■□□□□ 0.21
SEC13-215ENST00000477547 SSX2IPQ9Y2D8 614 aa16.38■□□□□ 0.21
SEC13-215ENST00000477547 A0A1W2PQC6 194 aa16.37■□□□□ 0.21
SEC13-215ENST00000477547 PI4K2BG5E9Z4 385 aa16.37■□□□□ 0.21
SEC13-215ENST00000477547 WEE2P0C1S8 567 aa16.37■□□□□ 0.21
SEC13-215ENST00000477547 RPL17P18621 184 aaKnown RBP16.37■□□□□ 0.21
SEC13-215ENST00000477547 RFX1P22670 979 aa16.37■□□□□ 0.21
SEC13-215ENST00000477547 CDH8P55286 799 aa16.37■□□□□ 0.21
SEC13-215ENST00000477547 YWHAEP62258 255 aaKnown RBP16.37■□□□□ 0.21
SEC13-215ENST00000477547 INCA1Q0VD86 236 aa16.37■□□□□ 0.21
SEC13-215ENST00000477547 PDE12Q6L8Q7 609 aaKnown RBP16.37■□□□□ 0.21
SEC13-215ENST00000477547 PHLDB3Q6NSJ2 640 aa16.37■□□□□ 0.21
SEC13-215ENST00000477547 GPR65Q8IYL9 337 aa16.37■□□□□ 0.21
SEC13-215ENST00000477547 THEM5Q8N1Q8 247 aa16.37■□□□□ 0.21
SEC13-215ENST00000477547 NEK11Q8NG66 645 aa16.37■□□□□ 0.21
SEC13-215ENST00000477547 OR6B3Q8NGW1 331 aa16.37■□□□□ 0.21
SEC13-215ENST00000477547 LNX1Q8TBB1 728 aaPredicted RBP16.37■□□□□ 0.21
SEC13-215ENST00000477547 GANQ9H2C0 597 aa16.37■□□□□ 0.21
SEC13-215ENST00000477547 PLCB1Q9NQ66 1216 aa16.37■□□□□ 0.21
SEC13-215ENST00000477547 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.37■□□□□ 0.21
SEC13-215ENST00000477547 HMGXB4Q9UGU5 601 aa16.37■□□□□ 0.21
SEC13-215ENST00000477547 FHOD1Q9Y613 1164 aa16.37■□□□□ 0.21
SEC13-215ENST00000477547 HIDE1A8MVS5 230 aa16.36■□□□□ 0.21
SEC13-215ENST00000477547 HCRTO43612 131 aa16.36■□□□□ 0.21
SEC13-215ENST00000477547 OAZ2O95190 189 aa16.36■□□□□ 0.21
SEC13-215ENST00000477547 ACAT1P24752 427 aaKnown RBP16.36■□□□□ 0.21
SEC13-215ENST00000477547 PCSK1P29120 753 aa16.36■□□□□ 0.21
SEC13-215ENST00000477547 LHX1P48742 406 aa16.36■□□□□ 0.21
SEC13-215ENST00000477547 NDUFV1P49821 464 aa16.36■□□□□ 0.21
SEC13-215ENST00000477547 MRPL58Q14197 206 aaKnown RBP16.36■□□□□ 0.21
SEC13-215ENST00000477547 NR1I3Q14994 352 aa16.36■□□□□ 0.21
SEC13-215ENST00000477547 UVSSAQ2YD98 709 aa16.36■□□□□ 0.21
SEC13-215ENST00000477547 KLHDC7AQ5VTJ3 777 aa16.36■□□□□ 0.21
SEC13-215ENST00000477547 ENOSF1Q7L5Y1 443 aa16.36■□□□□ 0.21
SEC13-215ENST00000477547 GLYCTKQ8IVS8 523 aa16.36■□□□□ 0.21
SEC13-215ENST00000477547 OR10T2Q8NGX3 314 aa16.36■□□□□ 0.21
SEC13-215ENST00000477547 FAM81BQ96LP2 452 aa16.36■□□□□ 0.21
SEC13-215ENST00000477547 KREMEN1Q96MU8 473 aa16.36■□□□□ 0.21
SEC13-215ENST00000477547 RTP3Q9BQQ7 232 aa16.36■□□□□ 0.21
SEC13-215ENST00000477547 SYT15Q9BQS2 421 aa16.36■□□□□ 0.21
SEC13-215ENST00000477547 EMILIN2Q9BXX0 1053 aa16.36■□□□□ 0.21
SEC13-215ENST00000477547 TRIM5Q9C035 493 aa16.36■□□□□ 0.21
SEC13-215ENST00000477547 UBE2TQ9NPD8 197 aaPredicted RBP16.36■□□□□ 0.21
SEC13-215ENST00000477547 CISHQ9NSE2 258 aa16.36■□□□□ 0.21
SEC13-215ENST00000477547 FBXL5Q9UKA1 691 aa16.36■□□□□ 0.21
SEC13-215ENST00000477547 AJAP1Q9UKB5 411 aaPredicted RBP16.36■□□□□ 0.21
SEC13-215ENST00000477547 BACE2Q9Y5Z0 518 aa16.36■□□□□ 0.21
SEC13-215ENST00000477547 IRAK3Q9Y616 596 aa16.36■□□□□ 0.21
SEC13-215ENST00000477547 CDY1Q9Y6F8 540 aa16.36■□□□□ 0.21
SEC13-215ENST00000477547 MYO16Q9Y6X6 1858 aa16.35■□□□□ 0.21
SEC13-215ENST00000477547 C2orf71A6NGG8 1288 aa16.35■□□□□ 0.21
SEC13-215ENST00000477547 OR6C75A6NL08 312 aa16.35■□□□□ 0.21
SEC13-215ENST00000477547 A8MXQ7 604 aa16.35■□□□□ 0.21
SEC13-215ENST00000477547 GABRDO14764 452 aa16.35■□□□□ 0.21
SEC13-215ENST00000477547 EPHB6O15197 1021 aa16.35■□□□□ 0.21
SEC13-215ENST00000477547 AP5Z1O43299 807 aa16.35■□□□□ 0.21
SEC13-215ENST00000477547 CXCL14O95715 111 aa16.35■□□□□ 0.21
SEC13-215ENST00000477547 CPB1P15086 417 aa16.35■□□□□ 0.21
SEC13-215ENST00000477547 UCHL3P15374 230 aa16.35■□□□□ 0.21
SEC13-215ENST00000477547 NDST1P52848 882 aa16.35■□□□□ 0.21
SEC13-215ENST00000477547 MFAP3P55082 362 aa16.35■□□□□ 0.21
SEC13-215ENST00000477547 PSMC1P62191 440 aaKnown RBP16.35■□□□□ 0.21
SEC13-215ENST00000477547 TSPY1Q01534 308 aa16.35■□□□□ 0.21
SEC13-215ENST00000477547 RAPGEF1Q13905 1077 aa16.35■□□□□ 0.21
SEC13-215ENST00000477547 ARHGAP44Q17R89 818 aa16.35■□□□□ 0.21
SEC13-215ENST00000477547 IQCEQ6IPM2 695 aa16.35■□□□□ 0.21
SEC13-215ENST00000477547 TTC39CQ8N584 583 aa16.35■□□□□ 0.21
SEC13-215ENST00000477547 UBR7Q8N806 425 aa16.35■□□□□ 0.21
SEC13-215ENST00000477547 FAM124BQ9H5Z6 455 aaPredicted RBP16.35■□□□□ 0.21
SEC13-215ENST00000477547 DNAJC12Q9UKB3 198 aa16.35■□□□□ 0.21
SEC13-215ENST00000477547 NME7Q9Y5B8 376 aa16.35■□□□□ 0.21
SEC13-215ENST00000477547 TEX28O15482 410 aa16.34■□□□□ 0.21
SEC13-215ENST00000477547 LILRB3O75022 631 aa16.34■□□□□ 0.21
SEC13-215ENST00000477547 CILPO75339 1184 aa16.34■□□□□ 0.21
SEC13-215ENST00000477547 ADH1AP07327 375 aa16.34■□□□□ 0.21
SEC13-215ENST00000477547 CNPP09543 421 aaKnown RBP16.34■□□□□ 0.21
SEC13-215ENST00000477547 FAM163BP0C2L3 166 aa16.34■□□□□ 0.21
SEC13-215ENST00000477547 OR4Q2P0C623 313 aa16.34■□□□□ 0.21
SEC13-215ENST00000477547 TRIM21P19474 475 aaKnown RBP16.34■□□□□ 0.21
SEC13-215ENST00000477547 GNL1P36915 607 aaPredicted RBP16.34■□□□□ 0.21
SEC13-215ENST00000477547 PBX1P40424 430 aa16.34■□□□□ 0.21
SEC13-215ENST00000477547 MRE11P49959 708 aa16.34■□□□□ 0.21
SEC13-215ENST00000477547 ARPP19P56211 112 aa16.34■□□□□ 0.21
SEC13-215ENST00000477547 POLR2FP61218 127 aaKnown RBP16.34■□□□□ 0.21
SEC13-215ENST00000477547 ROR1Q01973 937 aa16.34■□□□□ 0.21
SEC13-215ENST00000477547 ORC1Q13415 861 aa16.34■□□□□ 0.21
SEC13-215ENST00000477547 INTS6LQ5JSJ4 861 aaKnown RBP16.34■□□□□ 0.21
SEC13-215ENST00000477547 DPY19L2P1Q6NXN4 242 aa16.34■□□□□ 0.21
SEC13-215ENST00000477547 RSPO2Q6UXX9 243 aaPredicted RBP16.34■□□□□ 0.21
SEC13-215ENST00000477547 ADGRD2Q7Z7M1 963 aa16.34■□□□□ 0.21
SEC13-215ENST00000477547 MRPL43Q8N983 215 aaKnown RBP16.34■□□□□ 0.21
SEC13-215ENST00000477547 PPP2R3CQ969Q6 453 aa16.34■□□□□ 0.21
SEC13-215ENST00000477547 TMEM209Q96SK2 561 aa16.34■□□□□ 0.21
SEC13-215ENST00000477547 CLSTN3Q9BQT9 956 aa16.34■□□□□ 0.21
SEC13-215ENST00000477547 OXCT2Q9BYC2 517 aaPredicted RBP16.34■□□□□ 0.21
SEC13-215ENST00000477547 DPEP3Q9H4B8 488 aa16.34■□□□□ 0.21
SEC13-215ENST00000477547 NSUN3Q9H649 340 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms