RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 TFIP11Q9UBB9 837 aaKnown RBP7.58□□□□□ -1.2
HDAC3-207ENST00000475549 ASB3Q9Y575 518 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 FAM186AA6NE01 2351 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 PTPRJQ12913 1337 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 MYBPHLA2RUH7 354 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 SLC38A8A6NNN8 435 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 MAN2B1O00754 1011 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 CHADO15335 359 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 NCAM2O15394 837 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 TGFB1I1O43294 461 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 STX6O43752 255 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 EXTL3O43909 919 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 IL18RAPO95256 599 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 GCNT3O95395 438 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 F11P03951 625 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 IDEP14735 1019 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 GAP43P17677 238 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 WEE1P30291 646 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 POLR2BP30876 1174 aaKnown RBP7.57□□□□□ -1.2
HDAC3-207ENST00000475549 MAGEA9P43362 315 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 TUFMP49411 452 aaKnown RBP7.57□□□□□ -1.2
HDAC3-207ENST00000475549 CYP4F8P98187 520 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 TFAMQ00059 246 aaKnown RBP7.57□□□□□ -1.2
HDAC3-207ENST00000475549 SOWAHAQ2M3V2 549 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 MGAT5BQ3V5L5 792 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 GPR158Q5T848 1215 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 SDHAF4Q5VUM1 108 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 SHC4Q6S5L8 630 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 CCDC73Q6ZRK6 1079 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 LIMS2Q7Z4I7 341 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 BRSK2Q8IWQ3 736 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 CSGALNACT2Q8N6G5 542 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 OR5B17Q8NGF7 314 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 DEPDC1BQ8WUY9 529 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 ATRIPQ8WXE1 791 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 RUBCNQ92622 972 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 HVCN1Q96D96 273 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 PI4K2AQ9BTU6 479 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 SLITRK6Q9H5Y7 841 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 KBTBD4Q9NVX7 518 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 RBAKQ9NYW8 714 aaPredicted RBP7.57□□□□□ -1.2
HDAC3-207ENST00000475549 SEL1LQ9UBV2 794 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 DSEQ9UL01 958 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 L1RE1Q9UN81 338 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 AGAP1Q9UPQ3 857 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 CCL26Q9Y258 94 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 MRPS17Q9Y2R5 130 aaKnown RBP7.57□□□□□ -1.2
HDAC3-207ENST00000475549 PCDHB13Q9Y5F0 798 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 PCDHGA2Q9Y5H1 932 aa7.57□□□□□ -1.2
HDAC3-207ENST00000475549 CACNA1IQ9P0X4 2223 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 OTOGLQ3ZCN5 2332 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 SPECC1L-ADORA2AF8WAN1 911 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 K7ELQ4 463 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-207ENST00000475549 K7ESF4 209 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 TULP1O00294 542 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-207ENST00000475549 GABRDO14764 452 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 HRO43593 1189 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 KINO60870 393 aaKnown RBP7.56□□□□□ -1.2
HDAC3-207ENST00000475549 ATP2C2O75185 946 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 TADA3O75528 432 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 ITGB3P05106 788 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 GARTP22102 1010 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 ACAT1P24752 427 aaKnown RBP7.56□□□□□ -1.2
HDAC3-207ENST00000475549 CYP2F1P24903 491 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 LMO2P25791 158 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 CASP1P29466 404 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 STAT6P42226 847 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 ID4P47928 161 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 NLRP12P59046 1061 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 SATB1Q01826 763 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 DMWDQ09019 674 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 DDR2Q16832 855 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 LMBRD2Q68DH5 695 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-207ENST00000475549 TXNDC8Q6A555 127 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 ZC3H14Q6PJT7 736 aaKnown RBP7.56□□□□□ -1.2
HDAC3-207ENST00000475549 Q6ZS52 159 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 EPM2AIP1Q7L775 607 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-207ENST00000475549 ITIH5Q86UX2 942 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 METTL23Q86XA0 190 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 NT5DC4Q86YG4 428 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 CBWD2Q8IUF1 395 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 SYCP3Q8IZU3 236 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 CMTM8Q8IZV2 173 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 THEM5Q8N1Q8 247 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 C2orf15Q8WU43 125 aaKnown RBP7.56□□□□□ -1.2
HDAC3-207ENST00000475549 KBTBD7Q8WVZ9 684 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 USP13Q92995 863 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-207ENST00000475549 E2F7Q96AV8 911 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 FAM83CQ9BQN1 747 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 ACBD6Q9BR61 282 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 TRIM9Q9C026 710 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 MTMR12Q9C0I1 747 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 GZF1Q9H116 711 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-207ENST00000475549 EPC1Q9H2F5 836 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 ZSCAN16Q9H4T2 348 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-207ENST00000475549 TASP1Q9H6P5 420 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 FBRSL1Q9HCM7 1045 aaKnown RBP7.56□□□□□ -1.2
HDAC3-207ENST00000475549 GDAP2Q9NXN4 497 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 OBP2AQ9NY56 170 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 ABI2Q9NYB9 513 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms