RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 ALAS1P13196 640 aa6.44□□□□□ -1.38
SDHB-205ENST00000475506 EGR1P18146 543 aa6.44□□□□□ -1.38
SDHB-205ENST00000475506 ACVR2AP27037 513 aa6.44□□□□□ -1.38
SDHB-205ENST00000475506 DDX10Q13206 875 aaKnown RBP6.44□□□□□ -1.38
SDHB-205ENST00000475506 SLC29A2Q14542 456 aa6.44□□□□□ -1.38
SDHB-205ENST00000475506 INTS11Q5TA45 600 aaKnown RBP6.44□□□□□ -1.38
SDHB-205ENST00000475506 FAM160B1Q5W0V3 765 aa6.44□□□□□ -1.38
SDHB-205ENST00000475506 PLAG1Q6DJT9 500 aa6.44□□□□□ -1.38
SDHB-205ENST00000475506 KCTD20Q7Z5Y7 419 aa6.44□□□□□ -1.38
SDHB-205ENST00000475506 YAF2Q8IY57 180 aa6.44□□□□□ -1.38
SDHB-205ENST00000475506 PDPRQ8NCN5 879 aa6.44□□□□□ -1.38
SDHB-205ENST00000475506 TBC1D15Q8TC07 691 aa6.44□□□□□ -1.38
SDHB-205ENST00000475506 OTUD7AQ8TE49 926 aaPredicted RBP6.44□□□□□ -1.38
SDHB-205ENST00000475506 EID2BQ96D98 161 aa6.44□□□□□ -1.38
SDHB-205ENST00000475506 MESP1Q9BRJ9 268 aa6.44□□□□□ -1.38
SDHB-205ENST00000475506 IMPG2Q9BZV3 1241 aa6.44□□□□□ -1.38
SDHB-205ENST00000475506 PCDHAC1Q9H158 963 aa6.44□□□□□ -1.38
SDHB-205ENST00000475506 HESX1Q9UBX0 185 aa6.44□□□□□ -1.38
SDHB-205ENST00000475506 ZMYND8Q9ULU4 1186 aaPredicted RBP6.44□□□□□ -1.38
SDHB-205ENST00000475506 CAPN11Q9UMQ6 739 aa6.44□□□□□ -1.38
SDHB-205ENST00000475506 ATP11BQ9Y2G3 1177 aa6.44□□□□□ -1.38
SDHB-205ENST00000475506 PMS2P1A4D2B8 440 aa6.43□□□□□ -1.38
SDHB-205ENST00000475506 DCLK1O15075 740 aa6.43□□□□□ -1.38
SDHB-205ENST00000475506 IRAK2O43187 625 aa6.43□□□□□ -1.38
SDHB-205ENST00000475506 POLBP06746 335 aa6.43□□□□□ -1.38
SDHB-205ENST00000475506 GYS1P13807 737 aa6.43□□□□□ -1.38
SDHB-205ENST00000475506 CNTFP26441 200 aa6.43□□□□□ -1.38
SDHB-205ENST00000475506 DDIT3P35638 169 aa6.43□□□□□ -1.38
SDHB-205ENST00000475506 MXRA7P84157 204 aa6.43□□□□□ -1.38
SDHB-205ENST00000475506 CAP1Q01518 475 aa6.43□□□□□ -1.38
SDHB-205ENST00000475506 SLFN5Q08AF3 891 aa6.43□□□□□ -1.38
SDHB-205ENST00000475506 G3BP1Q13283 466 aaKnown RBP eCLIP6.43□□□□□ -1.38
SDHB-205ENST00000475506 ATXN7L2Q5T6C5 722 aaPredicted RBP6.43□□□□□ -1.38
SDHB-205ENST00000475506 MAATS1Q7Z4T9 603 aa6.43□□□□□ -1.38
SDHB-205ENST00000475506 ZNF761Q86XN6 746 aaPredicted RBP6.43□□□□□ -1.38
SDHB-205ENST00000475506 TMTC1Q8IUR5 882 aa6.43□□□□□ -1.38
SDHB-205ENST00000475506 KBTBD2Q8IY47 623 aa6.43□□□□□ -1.38
SDHB-205ENST00000475506 NAXEQ8NCW5 288 aa6.43□□□□□ -1.38
SDHB-205ENST00000475506 CCDC150Q8NCX0 1101 aa6.43□□□□□ -1.38
SDHB-205ENST00000475506 SHCBP1Q8NEM2 672 aa6.43□□□□□ -1.38
SDHB-205ENST00000475506 IPCEF1Q8WWN9 437 aaPredicted RBP6.43□□□□□ -1.38
SDHB-205ENST00000475506 USP13Q92995 863 aaPredicted RBP6.43□□□□□ -1.38
SDHB-205ENST00000475506 LCORQ96JN0 433 aaPredicted RBP6.43□□□□□ -1.38
SDHB-205ENST00000475506 TCF25Q9BQ70 676 aa6.43□□□□□ -1.38
SDHB-205ENST00000475506 CNPPD1Q9BV87 410 aa6.43□□□□□ -1.38
SDHB-205ENST00000475506 TLR10Q9BXR5 811 aa6.43□□□□□ -1.38
SDHB-205ENST00000475506 CPEB1Q9BZB8 566 aaKnown RBP6.43□□□□□ -1.38
SDHB-205ENST00000475506 ZFP64Q9NPA5 681 aa6.43□□□□□ -1.38
SDHB-205ENST00000475506 HEYLQ9NQ87 328 aaPredicted RBP6.43□□□□□ -1.38
SDHB-205ENST00000475506 XPNPEP3Q9NQH7 507 aa6.43□□□□□ -1.38
SDHB-205ENST00000475506 IFT80Q9P2H3 777 aaPredicted RBP6.43□□□□□ -1.38
SDHB-205ENST00000475506 DKK4Q9UBT3 224 aa6.43□□□□□ -1.38
SDHB-205ENST00000475506 SWAP70Q9UH65 585 aa6.43□□□□□ -1.38
SDHB-205ENST00000475506 KAT6BQ8WYB5 2073 aa6.43□□□□□ -1.38
SDHB-205ENST00000475506 A0A1W2PRX2 142 aa6.42□□□□□ -1.38
SDHB-205ENST00000475506 VPS4BO75351 444 aa6.42□□□□□ -1.38
SDHB-205ENST00000475506 CHEK2O96017 543 aa6.42□□□□□ -1.38
SDHB-205ENST00000475506 KRT1P04264 644 aa6.42□□□□□ -1.38
SDHB-205ENST00000475506 ITGB1P05556 798 aa6.42□□□□□ -1.38
SDHB-205ENST00000475506 PECAM1P16284 738 aaPredicted RBP6.42□□□□□ -1.38
SDHB-205ENST00000475506 VIPR2P41587 438 aa6.42□□□□□ -1.38
SDHB-205ENST00000475506 KCNAB1Q14722 419 aa6.42□□□□□ -1.38
SDHB-205ENST00000475506 TAF12Q16514 161 aa6.42□□□□□ -1.38
SDHB-205ENST00000475506 MAPKAPK3Q16644 382 aa6.42□□□□□ -1.38
SDHB-205ENST00000475506 ZIK1Q3SY52 487 aaPredicted RBP6.42□□□□□ -1.38
SDHB-205ENST00000475506 PLA1AQ53H76 456 aa6.42□□□□□ -1.38
SDHB-205ENST00000475506 NOMO2Q5JPE7 1267 aa6.42□□□□□ -1.38
SDHB-205ENST00000475506 FBXO47Q5MNV8 452 aa6.42□□□□□ -1.38
SDHB-205ENST00000475506 GAS2L3Q86XJ1 694 aa6.42□□□□□ -1.38
SDHB-205ENST00000475506 ZNF280BQ86YH2 543 aa6.42□□□□□ -1.38
SDHB-205ENST00000475506 CPOQ8IVL8 374 aa6.42□□□□□ -1.38
SDHB-205ENST00000475506 CCDC28AQ8IWP9 274 aa6.42□□□□□ -1.38
SDHB-205ENST00000475506 ZFPM1Q8IX07 1006 aa6.42□□□□□ -1.38
SDHB-205ENST00000475506 FITM2Q8N6M3 262 aa6.42□□□□□ -1.38
SDHB-205ENST00000475506 AOPEPQ8N6M6 819 aa6.42□□□□□ -1.38
SDHB-205ENST00000475506 TP53I13Q8NBR0 393 aaPredicted RBP6.42□□□□□ -1.38
SDHB-205ENST00000475506 TFAP2CQ92754 450 aa6.42□□□□□ -1.38
SDHB-205ENST00000475506 ZNF512Q96ME7 567 aaPredicted RBP6.42□□□□□ -1.38
SDHB-205ENST00000475506 PRPF18Q99633 342 aaKnown RBP6.42□□□□□ -1.38
SDHB-205ENST00000475506 DPYSL5Q9BPU6 564 aa6.42□□□□□ -1.38
SDHB-205ENST00000475506 EPC1Q9H2F5 836 aa6.42□□□□□ -1.38
SDHB-205ENST00000475506 USP40Q9NVE5 1235 aa6.42□□□□□ -1.38
SDHB-205ENST00000475506 ETAA1Q9NY74 926 aa6.42□□□□□ -1.38
SDHB-205ENST00000475506 LOC102723971A0A1B0GUV8 181 aa6.41□□□□□ -1.38
SDHB-205ENST00000475506 TRIM13O60858 407 aa6.41□□□□□ -1.38
SDHB-205ENST00000475506 FAM155BO75949 473 aa6.41□□□□□ -1.38
SDHB-205ENST00000475506 FCER1AP12319 257 aa6.41□□□□□ -1.38
SDHB-205ENST00000475506 GLDCP23378 1020 aa6.41□□□□□ -1.38
SDHB-205ENST00000475506 ATICP31939 592 aa6.41□□□□□ -1.38
SDHB-205ENST00000475506 CPT1AP50416 773 aa6.41□□□□□ -1.38
SDHB-205ENST00000475506 WNT3P56703 355 aa6.41□□□□□ -1.38
SDHB-205ENST00000475506 MPP1Q00013 466 aa6.41□□□□□ -1.38
SDHB-205ENST00000475506 FSTL1Q12841 308 aa6.41□□□□□ -1.38
SDHB-205ENST00000475506 CNGB1Q14028 1251 aaPredicted RBP6.41□□□□□ -1.38
SDHB-205ENST00000475506 ARHGEF7Q14155 803 aa6.41□□□□□ -1.38
SDHB-205ENST00000475506 FAM110CQ1W6H9 321 aa6.41□□□□□ -1.38
SDHB-205ENST00000475506 AMOTQ4VCS5 1084 aa6.41□□□□□ -1.38
SDHB-205ENST00000475506 DOK3Q7L591 496 aa6.41□□□□□ -1.38
SDHB-205ENST00000475506 HERC6Q8IVU3 1022 aa6.41□□□□□ -1.38
SDHB-205ENST00000475506 SPPL3Q8TCT6 385 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms