RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 MAFFQ9ULX9 164 aa15.32■□□□□ 0.04
ATG9A-220ENST00000475339 ATXN2Q99700 1313 aaKnown RBP15.32■□□□□ 0.04
ATG9A-220ENST00000475339 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.31■□□□□ 0.04
ATG9A-220ENST00000475339 TNFRSF10BO14763 440 aa15.31■□□□□ 0.04
ATG9A-220ENST00000475339 N4BP3O15049 544 aa15.31■□□□□ 0.04
ATG9A-220ENST00000475339 ATXN7O15265 892 aaPredicted RBP15.31■□□□□ 0.04
ATG9A-220ENST00000475339 OPHN1O60890 802 aa15.31■□□□□ 0.04
ATG9A-220ENST00000475339 VNN2O95498 520 aa15.31■□□□□ 0.04
ATG9A-220ENST00000475339 FTH1P19P0C7X4 201 aa15.31■□□□□ 0.04
ATG9A-220ENST00000475339 CD59P13987 128 aa15.31■□□□□ 0.04
ATG9A-220ENST00000475339 CPB1P15086 417 aa15.31■□□□□ 0.04
ATG9A-220ENST00000475339 PSMD2Q13200 908 aa15.31■□□□□ 0.04
ATG9A-220ENST00000475339 MAPK6Q16659 721 aa15.31■□□□□ 0.04
ATG9A-220ENST00000475339 TMEM132AQ24JP5 1023 aa15.31■□□□□ 0.04
ATG9A-220ENST00000475339 FBXO43Q4G163 708 aa15.31■□□□□ 0.04
ATG9A-220ENST00000475339 DTHD1Q6ZMT9 781 aa15.31■□□□□ 0.04
ATG9A-220ENST00000475339 PPP4R3CPQ6ZMV5 832 aa15.31■□□□□ 0.04
ATG9A-220ENST00000475339 TMEFF1Q8IYR6 380 aa15.31■□□□□ 0.04
ATG9A-220ENST00000475339 OR2I1PQ8NGU4 316 aa15.31■□□□□ 0.04
ATG9A-220ENST00000475339 ACDQ96AP0 544 aa15.31■□□□□ 0.04
ATG9A-220ENST00000475339 PRIMPOLQ96LW4 560 aa15.31■□□□□ 0.04
ATG9A-220ENST00000475339 PGLYRP2Q96PD5 576 aa15.31■□□□□ 0.04
ATG9A-220ENST00000475339 P2RY13Q9BPV8 354 aa15.31■□□□□ 0.04
ATG9A-220ENST00000475339 CRISPLD1Q9H336 500 aa15.31■□□□□ 0.04
ATG9A-220ENST00000475339 FZD8Q9H461 694 aa15.31■□□□□ 0.04
ATG9A-220ENST00000475339 PRMT7Q9NVM4 692 aaPredicted RBP15.31■□□□□ 0.04
ATG9A-220ENST00000475339 A0A087WV48 116 aa15.3■□□□□ 0.04
ATG9A-220ENST00000475339 LRRIQ4A6NIV6 560 aa15.3■□□□□ 0.04
ATG9A-220ENST00000475339 J3QKU1 62 aa15.3■□□□□ 0.04
ATG9A-220ENST00000475339 STX6O43752 255 aa15.3■□□□□ 0.04
ATG9A-220ENST00000475339 SLITRK3O94933 977 aa15.3■□□□□ 0.04
ATG9A-220ENST00000475339 BMP15O95972 392 aa15.3■□□□□ 0.04
ATG9A-220ENST00000475339 ARSAP15289 507 aa15.3■□□□□ 0.04
ATG9A-220ENST00000475339 GABRR2P28476 465 aa15.3■□□□□ 0.04
ATG9A-220ENST00000475339 PRPHP41219 470 aa15.3■□□□□ 0.04
ATG9A-220ENST00000475339 FXR2P51116 673 aaKnown RBP eCLIP15.3■□□□□ 0.04
ATG9A-220ENST00000475339 EPHB3P54753 998 aa15.3■□□□□ 0.04
ATG9A-220ENST00000475339 DUSP4Q13115 394 aa15.3■□□□□ 0.04
ATG9A-220ENST00000475339 HNRNPDQ14103 355 aaKnown RBP15.3■□□□□ 0.04
ATG9A-220ENST00000475339 EEF1DP3Q658K8 133 aa15.3■□□□□ 0.04
ATG9A-220ENST00000475339 ZNF280DQ6N043 979 aa15.3■□□□□ 0.04
ATG9A-220ENST00000475339 LPCAT2Q7L5N7 544 aa15.3■□□□□ 0.04
ATG9A-220ENST00000475339 DNAJB7Q7Z6W7 309 aaPredicted RBP15.3■□□□□ 0.04
ATG9A-220ENST00000475339 RASSF3Q86WH2 238 aa15.3■□□□□ 0.04
ATG9A-220ENST00000475339 FRMD1Q8N878 549 aa15.3■□□□□ 0.04
ATG9A-220ENST00000475339 RLN3Q8WXF3 142 aa15.3■□□□□ 0.04
ATG9A-220ENST00000475339 CNOT6LQ96LI5 555 aaKnown RBP15.3■□□□□ 0.04
ATG9A-220ENST00000475339 FNBP1Q96RU3 617 aa15.3■□□□□ 0.04
ATG9A-220ENST00000475339 HSD17B14Q9BPX1 270 aa15.3■□□□□ 0.04
ATG9A-220ENST00000475339 POLR3FQ9H1D9 316 aaPredicted RBP15.3■□□□□ 0.04
ATG9A-220ENST00000475339 TASP1Q9H6P5 420 aa15.3■□□□□ 0.04
ATG9A-220ENST00000475339 TUFT1Q9NNX1 390 aa15.3■□□□□ 0.04
ATG9A-220ENST00000475339 LRWD1Q9UFC0 647 aa15.3■□□□□ 0.04
ATG9A-220ENST00000475339 CIZ1Q9ULV3 898 aaPredicted RBP15.3■□□□□ 0.04
ATG9A-220ENST00000475339 STK24Q9Y6E0 443 aa15.3■□□□□ 0.04
ATG9A-220ENST00000475339 GOLGA4Q13439 2230 aaKnown RBP15.29■□□□□ 0.04
ATG9A-220ENST00000475339 SMIM28A0A1B0GU29 152 aa15.29■□□□□ 0.04
ATG9A-220ENST00000475339 PODXLO00592 558 aa15.29■□□□□ 0.04
ATG9A-220ENST00000475339 SH3BP5O60239 455 aa15.29■□□□□ 0.04
ATG9A-220ENST00000475339 LYPLA2O95372 231 aa15.29■□□□□ 0.04
ATG9A-220ENST00000475339 CCT6AP40227 531 aaKnown RBP15.29■□□□□ 0.04
ATG9A-220ENST00000475339 CYP4F8P98187 520 aa15.29■□□□□ 0.04
ATG9A-220ENST00000475339 ATP2C1P98194 919 aaPredicted RBP15.29■□□□□ 0.04
ATG9A-220ENST00000475339 AMPD2Q01433 879 aa15.29■□□□□ 0.04
ATG9A-220ENST00000475339 CYP4F3Q08477 520 aa15.29■□□□□ 0.04
ATG9A-220ENST00000475339 PLD1Q13393 1074 aa15.29■□□□□ 0.04
ATG9A-220ENST00000475339 ARHGAP15Q53QZ3 475 aa15.29■□□□□ 0.04
ATG9A-220ENST00000475339 TTC30AQ86WT1 665 aa15.29■□□□□ 0.04
ATG9A-220ENST00000475339 MINDY1Q8N5J2 469 aa15.29■□□□□ 0.04
ATG9A-220ENST00000475339 C4orf32Q8N8J7 132 aa15.29■□□□□ 0.04
ATG9A-220ENST00000475339 SPRYD3Q8NCJ5 442 aa15.29■□□□□ 0.04
ATG9A-220ENST00000475339 MDGA1Q8NFP4 955 aa15.29■□□□□ 0.04
ATG9A-220ENST00000475339 HNRNPABQ99729 332 aaKnown RBP15.29■□□□□ 0.04
ATG9A-220ENST00000475339 ADPGKQ9BRR6 497 aa15.29■□□□□ 0.04
ATG9A-220ENST00000475339 DKK4Q9UBT3 224 aa15.29■□□□□ 0.04
ATG9A-220ENST00000475339 PILRBQ9UKJ0 227 aa15.29■□□□□ 0.04
ATG9A-220ENST00000475339 NUB1Q9Y5A7 615 aa15.29■□□□□ 0.04
ATG9A-220ENST00000475339 ADAMTS9Q9P2N4 1935 aa15.29■□□□□ 0.04
ATG9A-220ENST00000475339 NUP210Q8TEM1 1887 aaPredicted RBP15.29■□□□□ 0.04
ATG9A-220ENST00000475339 TRIP11Q15643 1979 aa15.28■□□□□ 0.04
ATG9A-220ENST00000475339 MAP3K13O43283 966 aa15.28■□□□□ 0.04
ATG9A-220ENST00000475339 MED24O75448 989 aa15.28■□□□□ 0.04
ATG9A-220ENST00000475339 DGAT1O75907 488 aa15.28■□□□□ 0.04
ATG9A-220ENST00000475339 OR4Q2P0C623 313 aa15.28■□□□□ 0.04
ATG9A-220ENST00000475339 ITPKAP23677 461 aa15.28■□□□□ 0.04
ATG9A-220ENST00000475339 WEE1P30291 646 aa15.28■□□□□ 0.04
ATG9A-220ENST00000475339 GFPT1Q06210 699 aaPredicted RBP15.28■□□□□ 0.04
ATG9A-220ENST00000475339 RESTQ13127 1097 aa15.28■□□□□ 0.04
ATG9A-220ENST00000475339 PRPF4BQ13523 1007 aaKnown RBP15.28■□□□□ 0.04
ATG9A-220ENST00000475339 FAM187BQ17R55 369 aa15.28■□□□□ 0.04
ATG9A-220ENST00000475339 KRT79Q5XKE5 535 aa15.28■□□□□ 0.04
ATG9A-220ENST00000475339 MAEAQ7L5Y9 396 aa15.28■□□□□ 0.04
ATG9A-220ENST00000475339 BEST2Q8NFU1 509 aa15.28■□□□□ 0.04
ATG9A-220ENST00000475339 SNX29Q8TEQ0 813 aa15.28■□□□□ 0.04
ATG9A-220ENST00000475339 SLC46A2Q9BY10 475 aa15.28■□□□□ 0.04
ATG9A-220ENST00000475339 GPRC5CQ9NQ84 441 aa15.28■□□□□ 0.04
ATG9A-220ENST00000475339 ANKEF1Q9NU02 776 aa15.28■□□□□ 0.04
ATG9A-220ENST00000475339 SLC6A14Q9UN76 642 aa15.28■□□□□ 0.04
ATG9A-220ENST00000475339 MTMR6Q9Y217 621 aa15.28■□□□□ 0.04
ATG9A-220ENST00000475339 SLC27A5Q9Y2P5 690 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms