RNA–Protein interactions for RNA: ENST00000475074.1

IMP4-214, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 2

Gene IMP4, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-214ENST00000475074 CNGA2Q16280 664 aa11.77□□□□□ -0.53
IMP4-214ENST00000475074 ASTE1Q2TB18 679 aaPredicted RBP11.77□□□□□ -0.53
IMP4-214ENST00000475074 SGO2Q562F6 1265 aa11.77□□□□□ -0.53
IMP4-214ENST00000475074 C10orf76Q5T2E6 689 aa11.77□□□□□ -0.53
IMP4-214ENST00000475074 FAM171A1Q5VUB5 890 aa11.77□□□□□ -0.53
IMP4-214ENST00000475074 ZNF280DQ6N043 979 aa11.77□□□□□ -0.53
IMP4-214ENST00000475074 TMEM139Q8IV31 216 aa11.77□□□□□ -0.53
IMP4-214ENST00000475074 ZNF606Q8WXB4 792 aa11.77□□□□□ -0.53
IMP4-214ENST00000475074 PIK3R5Q8WYR1 880 aa11.77□□□□□ -0.53
IMP4-214ENST00000475074 CCDC42Q96M95 316 aa11.77□□□□□ -0.53
IMP4-214ENST00000475074 HERC2P3Q9BVR0 1158 aa11.77□□□□□ -0.53
IMP4-214ENST00000475074 ZNF518BQ9C0D4 1074 aa11.77□□□□□ -0.53
IMP4-214ENST00000475074 LHX5Q9H2C1 402 aa11.77□□□□□ -0.53
IMP4-214ENST00000475074 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.77□□□□□ -0.53
IMP4-214ENST00000475074 DDX43Q9NXZ2 648 aaKnown RBP11.77□□□□□ -0.53
IMP4-214ENST00000475074 ARHGAP20Q9P2F6 1191 aa11.77□□□□□ -0.53
IMP4-214ENST00000475074 MSRAQ9UJ68 235 aa11.77□□□□□ -0.53
IMP4-214ENST00000475074 NOCTQ9UK39 431 aaKnown RBP11.77□□□□□ -0.53
IMP4-214ENST00000475074 MAFFQ9ULX9 164 aa11.77□□□□□ -0.53
IMP4-214ENST00000475074 ATP8B3O60423 1300 aa11.77□□□□□ -0.53
IMP4-214ENST00000475074 KIAA1671Q9BY89 1806 aa11.76□□□□□ -0.53
IMP4-214ENST00000475074 TBC1D4O60343 1298 aa11.76□□□□□ -0.53
IMP4-214ENST00000475074 FGF18O76093 207 aa11.76□□□□□ -0.53
IMP4-214ENST00000475074 LCA5LO95447 670 aa11.76□□□□□ -0.53
IMP4-214ENST00000475074 LSM8O95777 96 aaKnown RBP11.76□□□□□ -0.53
IMP4-214ENST00000475074 PTPN1P18031 435 aaKnown RBP11.76□□□□□ -0.53
IMP4-214ENST00000475074 IGFBP6P24592 240 aaPredicted RBP11.76□□□□□ -0.53
IMP4-214ENST00000475074 TKTP29401 623 aaKnown RBP11.76□□□□□ -0.53
IMP4-214ENST00000475074 CYLC1P35663 651 aaPredicted RBP11.76□□□□□ -0.53
IMP4-214ENST00000475074 RAP1GAPP47736 663 aa11.76□□□□□ -0.53
IMP4-214ENST00000475074 TSPY1Q01534 308 aa11.76□□□□□ -0.53
IMP4-214ENST00000475074 DSG1Q02413 1049 aa11.76□□□□□ -0.53
IMP4-214ENST00000475074 NFE2Q16621 373 aaPredicted RBP11.76□□□□□ -0.53
IMP4-214ENST00000475074 VARS2Q5ST30 1063 aaKnown RBP11.76□□□□□ -0.53
IMP4-214ENST00000475074 E4F1Q66K89 784 aaPredicted RBP11.76□□□□□ -0.53
IMP4-214ENST00000475074 PDE12Q6L8Q7 609 aaKnown RBP11.76□□□□□ -0.53
IMP4-214ENST00000475074 FAM171BQ6P995 826 aa11.76□□□□□ -0.53
IMP4-214ENST00000475074 SLC47A2Q86VL8 602 aa11.76□□□□□ -0.53
IMP4-214ENST00000475074 OSTM1Q86WC4 334 aa11.76□□□□□ -0.53
IMP4-214ENST00000475074 TMEM173Q86WV6 379 aaPredicted RBP11.76□□□□□ -0.53
IMP4-214ENST00000475074 DCP1BQ8IZD4 617 aaKnown RBP11.76□□□□□ -0.53
IMP4-214ENST00000475074 B3GALNT2Q8NCR0 500 aa11.76□□□□□ -0.53
IMP4-214ENST00000475074 MYCBPAPQ8TBZ2 947 aa11.76□□□□□ -0.53
IMP4-214ENST00000475074 HASPINQ8TF76 798 aa11.76□□□□□ -0.53
IMP4-214ENST00000475074 C2orf15Q8WU43 125 aaKnown RBP11.76□□□□□ -0.53
IMP4-214ENST00000475074 DDX1Q92499 740 aaKnown RBP11.76□□□□□ -0.53
IMP4-214ENST00000475074 RABGGTAQ92696 567 aa11.76□□□□□ -0.53
IMP4-214ENST00000475074 ELMO3Q96BJ8 720 aa11.76□□□□□ -0.53
IMP4-214ENST00000475074 TGS1Q96RS0 853 aaKnown RBP11.76□□□□□ -0.53
IMP4-214ENST00000475074 AGPAT1Q99943 283 aa11.76□□□□□ -0.53
IMP4-214ENST00000475074 SYT15Q9BQS2 421 aa11.76□□□□□ -0.53
IMP4-214ENST00000475074 C11orf84Q9BUA3 381 aaPredicted RBP11.76□□□□□ -0.53
IMP4-214ENST00000475074 ELOVL4Q9GZR5 314 aa11.76□□□□□ -0.53
IMP4-214ENST00000475074 HAUS4Q9H6D7 363 aa11.76□□□□□ -0.53
IMP4-214ENST00000475074 NHEJ1Q9H9Q4 299 aaPredicted RBP11.76□□□□□ -0.53
IMP4-214ENST00000475074 FNIP2Q9P278 1114 aa11.76□□□□□ -0.53
IMP4-214ENST00000475074 HSFX1Q9UBD0 423 aa11.76□□□□□ -0.53
IMP4-214ENST00000475074 HCSTQ9UBK5 93 aa11.76□□□□□ -0.53
IMP4-214ENST00000475074 MTRRQ9UBK8 725 aa11.76□□□□□ -0.53
IMP4-214ENST00000475074 IRAK3Q9Y616 596 aa11.76□□□□□ -0.53
IMP4-214ENST00000475074 NLRC5Q86WI3 1866 aa11.75□□□□□ -0.53
IMP4-214ENST00000475074 EIF3CLB5ME19 914 aaKnown RBP11.75□□□□□ -0.53
IMP4-214ENST00000475074 NT5C1B-RDH14C9J2C7 533 aa11.75□□□□□ -0.53
IMP4-214ENST00000475074 F8W810 466 aa11.75□□□□□ -0.53
IMP4-214ENST00000475074 O00370 1275 aa11.75□□□□□ -0.53
IMP4-214ENST00000475074 SETSIPP0DME0 302 aa11.75□□□□□ -0.53
IMP4-214ENST00000475074 LMO2P25791 158 aa11.75□□□□□ -0.53
IMP4-214ENST00000475074 CDH5P33151 784 aaPredicted RBP11.75□□□□□ -0.53
IMP4-214ENST00000475074 GLUD2P49448 558 aa11.75□□□□□ -0.53
IMP4-214ENST00000475074 ARID5AQ03989 594 aa11.75□□□□□ -0.53
IMP4-214ENST00000475074 SLC18A3Q16572 532 aa11.75□□□□□ -0.53
IMP4-214ENST00000475074 TDRD12Q587J7 1177 aaKnown RBP11.75□□□□□ -0.53
IMP4-214ENST00000475074 INTS6LQ5JSJ4 861 aaKnown RBP11.75□□□□□ -0.53
IMP4-214ENST00000475074 KIAA0319Q5VV43 1072 aa11.75□□□□□ -0.53
IMP4-214ENST00000475074 SLC8B1Q6J4K2 584 aa11.75□□□□□ -0.53
IMP4-214ENST00000475074 KIAA1841Q6NSI8 718 aa11.75□□□□□ -0.53
IMP4-214ENST00000475074 LCLAT1Q6UWP7 414 aa11.75□□□□□ -0.53
IMP4-214ENST00000475074 C4orf50Q6ZRC1 276 aa11.75□□□□□ -0.53
IMP4-214ENST00000475074 ACOT1Q86TX2 421 aa11.75□□□□□ -0.53
IMP4-214ENST00000475074 NOP9Q86U38 636 aaKnown RBP11.75□□□□□ -0.53
IMP4-214ENST00000475074 TXLNBQ8N3L3 684 aa11.75□□□□□ -0.53
IMP4-214ENST00000475074 SLC30A5Q8TAD4 765 aa11.75□□□□□ -0.53
IMP4-214ENST00000475074 LNX1Q8TBB1 728 aaPredicted RBP11.75□□□□□ -0.53
IMP4-214ENST00000475074 BCL7CQ8WUZ0 217 aaPredicted RBP11.75□□□□□ -0.53
IMP4-214ENST00000475074 FUBP3Q96I24 572 aaKnown RBP eCLIP11.75□□□□□ -0.53
IMP4-214ENST00000475074 CEP295NLQ96MC4 621 aa11.75□□□□□ -0.53
IMP4-214ENST00000475074 HEXIM2Q96MH2 286 aaKnown RBP11.75□□□□□ -0.53
IMP4-214ENST00000475074 TWNKQ96RR1 684 aa11.75□□□□□ -0.53
IMP4-214ENST00000475074 EIF3CQ99613 913 aaKnown RBP11.75□□□□□ -0.53
IMP4-214ENST00000475074 PKMYT1Q99640 499 aa11.75□□□□□ -0.53
IMP4-214ENST00000475074 CHP1Q99653 195 aa11.75□□□□□ -0.53
IMP4-214ENST00000475074 HNRNPABQ99729 332 aaKnown RBP11.75□□□□□ -0.53
IMP4-214ENST00000475074 RTP3Q9BQQ7 232 aa11.75□□□□□ -0.53
IMP4-214ENST00000475074 UBXN6Q9BZV1 441 aa11.75□□□□□ -0.53
IMP4-214ENST00000475074 ZCWPW1Q9H0M4 648 aa11.75□□□□□ -0.53
IMP4-214ENST00000475074 ABCB6Q9NP58 842 aa11.75□□□□□ -0.53
IMP4-214ENST00000475074 LUC7LQ9NQ29 371 aaKnown RBP11.75□□□□□ -0.53
IMP4-214ENST00000475074 CYLDQ9NQC7 956 aa11.75□□□□□ -0.53
IMP4-214ENST00000475074 EPN1Q9Y6I3 576 aaPredicted RBP11.75□□□□□ -0.53
IMP4-214ENST00000475074 CEP290O15078 2479 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms