RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 IGSF9Q9P2J2 1179 aa15.24■□□□□ 0.03
VAMP4-203ENST00000474047 EPS15L1Q9UBC2 864 aa15.24■□□□□ 0.03
VAMP4-203ENST00000474047 CDH7Q9ULB5 785 aa15.24■□□□□ 0.03
VAMP4-203ENST00000474047 N4BP1O75113 896 aaKnown RBP15.23■□□□□ 0.03
VAMP4-203ENST00000474047 CLDN10P78369 228 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 CAMK4Q16566 473 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 ZNF699Q32M78 642 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 COBLL1Q53SF7 1204 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 ZNF667Q5HYK9 610 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 LRRTM3Q86VH5 581 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 UBALD2Q8IYN6 164 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 OR6B3Q8NGW1 331 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 ITFG1Q8TB96 612 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 FGF13Q92913 245 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 EEF2KMTQ96G04 330 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 GZF1Q9H116 711 aaPredicted RBP15.23■□□□□ 0.03
VAMP4-203ENST00000474047 MMRN2Q9H8L6 949 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 KCNK12Q9HB15 430 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 HSFX1Q9UBD0 423 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 DOCK6Q96HP0 2047 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 TSC2P49815 1807 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 VNN2O95498 520 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 C4BPAP04003 597 aaKnown RBP15.23■□□□□ 0.03
VAMP4-203ENST00000474047 PDGFRBP09619 1106 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 P4HA1P13674 534 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 GNL1P36915 607 aaPredicted RBP15.23■□□□□ 0.03
VAMP4-203ENST00000474047 PIK3CAP42336 1068 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 FKBP3Q00688 224 aaKnown RBP15.23■□□□□ 0.03
VAMP4-203ENST00000474047 TDGQ13569 410 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 SGSM1Q2NKQ1 1148 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 ZCWPW2Q504Y3 356 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 INTS6LQ5JSJ4 861 aaKnown RBP15.23■□□□□ 0.03
VAMP4-203ENST00000474047 ANKRD40Q6AI12 368 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 KLHL10Q6JEL2 608 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 ITIH5Q86UX2 942 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 SPATA2LQ8IUW3 424 aaPredicted RBP15.23■□□□□ 0.03
VAMP4-203ENST00000474047 ADSSL1Q8N142 457 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 LEMD2Q8NC56 503 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 NXPE3Q969Y0 559 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 DHTKD1Q96HY7 919 aaPredicted RBP15.23■□□□□ 0.03
VAMP4-203ENST00000474047 GBP4Q96PP9 640 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 PI4K2AQ9BTU6 479 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 IMPG2Q9BZV3 1241 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 CEP72Q9P209 647 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 GTF3C4Q9UKN8 822 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 ASB3Q9Y575 518 aa15.23■□□□□ 0.03
VAMP4-203ENST00000474047 GABRDO14764 452 aa15.22■□□□□ 0.03
VAMP4-203ENST00000474047 STX10O60499 249 aa15.22■□□□□ 0.03
VAMP4-203ENST00000474047 GPR37L1O60883 481 aa15.22■□□□□ 0.03
VAMP4-203ENST00000474047 SOAT2O75908 522 aa15.22■□□□□ 0.03
VAMP4-203ENST00000474047 TRIM49P0CI25 452 aa15.22■□□□□ 0.03
VAMP4-203ENST00000474047 TRIM49CP0CI26 452 aa15.22■□□□□ 0.03
VAMP4-203ENST00000474047 LRRC63Q05C16 580 aa15.22■□□□□ 0.03
VAMP4-203ENST00000474047 TRIM67Q6ZTA4 783 aa15.22■□□□□ 0.03
VAMP4-203ENST00000474047 SV2AQ7L0J3 742 aa15.22■□□□□ 0.03
VAMP4-203ENST00000474047 OSTM1Q86WC4 334 aa15.22■□□□□ 0.03
VAMP4-203ENST00000474047 HS6ST3Q8IZP7 471 aa15.22■□□□□ 0.03
VAMP4-203ENST00000474047 TTC9BQ8N6N2 239 aa15.22■□□□□ 0.03
VAMP4-203ENST00000474047 CCDC150Q8NCX0 1101 aa15.22■□□□□ 0.03
VAMP4-203ENST00000474047 MCRS1Q96EZ8 462 aa15.22■□□□□ 0.03
VAMP4-203ENST00000474047 MKNK1Q9BUB5 465 aa15.22■□□□□ 0.03
VAMP4-203ENST00000474047 CRISPLD1Q9H336 500 aa15.22■□□□□ 0.03
VAMP4-203ENST00000474047 CDH9Q9ULB4 789 aa15.22■□□□□ 0.03
VAMP4-203ENST00000474047 STAU1O95793 577 aaKnown RBP15.21■□□□□ 0.03
VAMP4-203ENST00000474047 WARSP23381 471 aaKnown RBP15.21■□□□□ 0.03
VAMP4-203ENST00000474047 CCNE1P24864 410 aa15.21■□□□□ 0.03
VAMP4-203ENST00000474047 GCLMP48507 274 aa15.21■□□□□ 0.03
VAMP4-203ENST00000474047 SIGLEC14Q08ET2 396 aa15.21■□□□□ 0.03
VAMP4-203ENST00000474047 MAPRE1Q15691 268 aaKnown RBP15.21■□□□□ 0.03
VAMP4-203ENST00000474047 ZACNQ401N2 412 aa15.21■□□□□ 0.03
VAMP4-203ENST00000474047 TCERG1LQ5VWI1 586 aa15.21■□□□□ 0.03
VAMP4-203ENST00000474047 MTSS1LQ765P7 747 aa15.21■□□□□ 0.03
VAMP4-203ENST00000474047 RSAD2Q8WXG1 361 aa15.21■□□□□ 0.03
VAMP4-203ENST00000474047 SYT15Q9BQS2 421 aa15.21■□□□□ 0.03
VAMP4-203ENST00000474047 MRPL45Q9BRJ2 306 aaKnown RBP15.21■□□□□ 0.03
VAMP4-203ENST00000474047 AVENQ9NQS1 362 aaPredicted RBP15.21■□□□□ 0.03
VAMP4-203ENST00000474047 BICDL2A1A5D9 508 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 TRIM49BA6NDI0 452 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 TMEM221A6NGB7 291 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 M0R296 226 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 FAM163BP0C2L3 166 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 HAPLN1P10915 354 aaPredicted RBP15.2■□□□□ 0.02
VAMP4-203ENST00000474047 LMO2P25791 158 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 PSMC1P62191 440 aaKnown RBP15.2■□□□□ 0.02
VAMP4-203ENST00000474047 RPL10AP62906 217 aaKnown RBP15.2■□□□□ 0.02
VAMP4-203ENST00000474047 MORC3Q14149 939 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 SLC5A9Q2M3M2 681 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 C4orf50Q6ZRC1 276 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 DNAJB7Q7Z6W7 309 aaPredicted RBP15.2■□□□□ 0.02
VAMP4-203ENST00000474047 ST13P5Q8NFI4 369 aaPredicted RBP15.2■□□□□ 0.02
VAMP4-203ENST00000474047 GIPC2Q8TF65 315 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 KBTBD7Q8WVZ9 684 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 TAF4BQ92750 862 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 LRFN3Q9BTN0 628 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 XYLT2Q9H1B5 865 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 SLITRK6Q9H5Y7 841 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 TMLHEQ9NVH6 421 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 GDE1Q9NZC3 331 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 MAGEC2Q9UBF1 373 aaPredicted RBP15.2■□□□□ 0.02
VAMP4-203ENST00000474047 A8MXQ7 604 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms