RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 ATP8B2P98198 1209 aa2.82□□□□□ -1.96
CCDC39-203ENST00000473854 PDCD1Q15116 288 aa2.82□□□□□ -1.96
CCDC39-203ENST00000473854 LEXMQ3ZCV2 418 aa2.82□□□□□ -1.96
CCDC39-203ENST00000473854 ATP13A4Q4VNC1 1196 aa2.82□□□□□ -1.96
CCDC39-203ENST00000473854 PCID2Q5JVF3 399 aa2.82□□□□□ -1.96
CCDC39-203ENST00000473854 C9orf50Q5SZB4 431 aa2.82□□□□□ -1.96
CCDC39-203ENST00000473854 GFI1BQ5VTD9 330 aa2.82□□□□□ -1.96
CCDC39-203ENST00000473854 DAB2IPQ5VWQ8 1189 aa2.82□□□□□ -1.96
CCDC39-203ENST00000473854 FBXL22Q6P050 247 aa2.82□□□□□ -1.96
CCDC39-203ENST00000473854 GALNT4Q8N4A0 578 aa2.82□□□□□ -1.96
CCDC39-203ENST00000473854 DAZAP1Q96EP5 407 aaKnown RBP2.82□□□□□ -1.96
CCDC39-203ENST00000473854 KLHL32Q96NJ5 620 aa2.82□□□□□ -1.96
CCDC39-203ENST00000473854 MYBBP1AQ9BQG0 1328 aaKnown RBP2.82□□□□□ -1.96
CCDC39-203ENST00000473854 PPP1R12AO14974 1030 aaPredicted RBP2.81□□□□□ -1.96
CCDC39-203ENST00000473854 GAS8-AS1O95177 125 aa2.81□□□□□ -1.96
CCDC39-203ENST00000473854 AMY1AP04745 511 aa2.81□□□□□ -1.96
CCDC39-203ENST00000473854 CDKN2AP42771 156 aaKnown RBP2.81□□□□□ -1.96
CCDC39-203ENST00000473854 SLC6A9P48067 706 aa2.81□□□□□ -1.96
CCDC39-203ENST00000473854 SLC5A3P53794 718 aa2.81□□□□□ -1.96
CCDC39-203ENST00000473854 HILS1P60008 231 aa2.81□□□□□ -1.96
CCDC39-203ENST00000473854 GHRHRQ02643 423 aa2.81□□□□□ -1.96
CCDC39-203ENST00000473854 SRSF1Q07955 248 aaKnown RBP eCLIP2.81□□□□□ -1.96
CCDC39-203ENST00000473854 TRIM71Q2Q1W2 868 aaKnown RBP2.81□□□□□ -1.96
CCDC39-203ENST00000473854 ZNF813Q6ZN06 617 aa2.81□□□□□ -1.96
CCDC39-203ENST00000473854 ZNF365Q70YC5 407 aa2.81□□□□□ -1.96
CCDC39-203ENST00000473854 IL17RDQ8NFM7 739 aa2.81□□□□□ -1.96
CCDC39-203ENST00000473854 KLHDC4Q8TBB5 520 aa2.81□□□□□ -1.96
CCDC39-203ENST00000473854 POC1BQ8TC44 478 aa2.81□□□□□ -1.96
CCDC39-203ENST00000473854 FAM136AQ96C01 138 aa2.81□□□□□ -1.96
CCDC39-203ENST00000473854 ZC3H10Q96K80 434 aaKnown RBP2.81□□□□□ -1.96
CCDC39-203ENST00000473854 PUS7Q96PZ0 661 aaKnown RBP2.81□□□□□ -1.96
CCDC39-203ENST00000473854 IMPG2Q9BZV3 1241 aa2.81□□□□□ -1.96
CCDC39-203ENST00000473854 AMBRA1Q9C0C7 1298 aa2.81□□□□□ -1.96
CCDC39-203ENST00000473854 SELENONQ9NZV5 590 aa2.81□□□□□ -1.96
CCDC39-203ENST00000473854 KLHL13Q9P2N7 655 aa2.81□□□□□ -1.96
CCDC39-203ENST00000473854 DKK3Q9UBP4 350 aa2.81□□□□□ -1.96
CCDC39-203ENST00000473854 SCAF8Q9UPN6 1271 aaKnown RBP2.81□□□□□ -1.96
CCDC39-203ENST00000473854 NOTCH3Q9UM47 2321 aa2.8□□□□□ -1.96
CCDC39-203ENST00000473854 C4orf47A7E2U8 309 aa2.8□□□□□ -1.96
CCDC39-203ENST00000473854 FCHO1O14526 889 aa2.8□□□□□ -1.96
CCDC39-203ENST00000473854 GRM6O15303 877 aa2.8□□□□□ -1.96
CCDC39-203ENST00000473854 TLR5O60602 858 aa2.8□□□□□ -1.96
CCDC39-203ENST00000473854 ASMTLO95671 621 aa2.8□□□□□ -1.96
CCDC39-203ENST00000473854 TOMM40O96008 361 aa2.8□□□□□ -1.96
CCDC39-203ENST00000473854 NPSP0C0P6 89 aa2.8□□□□□ -1.96
CCDC39-203ENST00000473854 CYP2C18P33260 490 aa2.8□□□□□ -1.96
CCDC39-203ENST00000473854 SQSTM1Q13501 440 aa2.8□□□□□ -1.96
CCDC39-203ENST00000473854 ZNF268Q14587 947 aaPredicted RBP2.8□□□□□ -1.96
CCDC39-203ENST00000473854 TCEA2Q15560 299 aa2.8□□□□□ -1.96
CCDC39-203ENST00000473854 NAALADL2Q58DX5 795 aa2.8□□□□□ -1.96
CCDC39-203ENST00000473854 CNNM4Q6P4Q7 775 aa2.8□□□□□ -1.96
CCDC39-203ENST00000473854 C7orf25Q9BPX7 421 aa2.8□□□□□ -1.96
CCDC39-203ENST00000473854 DMRT3Q9NQL9 472 aa2.8□□□□□ -1.96
CCDC39-203ENST00000473854 TOPORSQ9NS56 1045 aaPredicted RBP2.8□□□□□ -1.96
CCDC39-203ENST00000473854 DLL3Q9NYJ7 618 aa2.8□□□□□ -1.96
CCDC39-203ENST00000473854 VSX1Q9NZR4 365 aaPredicted RBP2.8□□□□□ -1.96
CCDC39-203ENST00000473854 MCM8Q9UJA3 840 aa2.8□□□□□ -1.96
CCDC39-203ENST00000473854 B4DGG1 531 aa2.79□□□□□ -1.96
CCDC39-203ENST00000473854 POLRMTO00411 1230 aaKnown RBP2.79□□□□□ -1.96
CCDC39-203ENST00000473854 ADAM10O14672 748 aa2.79□□□□□ -1.96
CCDC39-203ENST00000473854 SLC16A3O15427 465 aaKnown RBP2.79□□□□□ -1.96
CCDC39-203ENST00000473854 TULP3O75386 442 aa2.79□□□□□ -1.96
CCDC39-203ENST00000473854 SLC43A1O75387 559 aa2.79□□□□□ -1.96
CCDC39-203ENST00000473854 EYA4O95677 639 aa2.79□□□□□ -1.96
CCDC39-203ENST00000473854 ITGALP20701 1170 aa2.79□□□□□ -1.96
CCDC39-203ENST00000473854 CD6P30203 668 aa2.79□□□□□ -1.96
CCDC39-203ENST00000473854 SLC6A4P31645 630 aa2.79□□□□□ -1.96
CCDC39-203ENST00000473854 SEPT2Q15019 361 aa2.79□□□□□ -1.96
CCDC39-203ENST00000473854 NFE2L2Q16236 605 aa2.79□□□□□ -1.96
CCDC39-203ENST00000473854 MEX3CQ5U5Q3 659 aaKnown RBP2.79□□□□□ -1.96
CCDC39-203ENST00000473854 MAVSQ7Z434 540 aa2.79□□□□□ -1.96
CCDC39-203ENST00000473854 ZGPATQ8N5A5 531 aaKnown RBP2.79□□□□□ -1.96
CCDC39-203ENST00000473854 NSUN7Q8NE18 718 aaKnown RBP2.79□□□□□ -1.96
CCDC39-203ENST00000473854 RP9Q8TA86 221 aaKnown RBP2.79□□□□□ -1.96
CCDC39-203ENST00000473854 CYP2W1Q8TAV3 490 aa2.79□□□□□ -1.96
CCDC39-203ENST00000473854 RITA1Q96K30 269 aa2.79□□□□□ -1.96
CCDC39-203ENST00000473854 MEIS3Q99687 375 aa2.79□□□□□ -1.96
CCDC39-203ENST00000473854 QRSL1Q9H0R6 528 aaKnown RBP2.79□□□□□ -1.96
CCDC39-203ENST00000473854 FAM234AQ9H0X4 552 aa2.79□□□□□ -1.96
CCDC39-203ENST00000473854 TRMT13Q9NUP7 481 aaKnown RBP2.79□□□□□ -1.96
CCDC39-203ENST00000473854 ZMYM2Q9UBW7 1377 aa2.78□□□□□ -1.96
CCDC39-203ENST00000473854 FZD9O00144 591 aa2.78□□□□□ -1.96
CCDC39-203ENST00000473854 PSG1P11464 419 aa2.78□□□□□ -1.96
CCDC39-203ENST00000473854 CYP2A6P11509 494 aaPredicted RBP2.78□□□□□ -1.96
CCDC39-203ENST00000473854 ME1P48163 572 aa2.78□□□□□ -1.96
CCDC39-203ENST00000473854 CYP4F2P78329 520 aa2.78□□□□□ -1.96
CCDC39-203ENST00000473854 PCBP1Q15365 356 aaKnown RBP eCLIP2.78□□□□□ -1.96
CCDC39-203ENST00000473854 ASIC2Q16515 512 aa2.78□□□□□ -1.96
CCDC39-203ENST00000473854 TBC1D25Q3MII6 688 aa2.78□□□□□ -1.96
CCDC39-203ENST00000473854 PDXDC1Q6P996 788 aa2.78□□□□□ -1.96
CCDC39-203ENST00000473854 MTHFD1LQ6UB35 978 aa2.78□□□□□ -1.96
CCDC39-203ENST00000473854 NAPRTQ6XQN6 538 aa2.78□□□□□ -1.96
CCDC39-203ENST00000473854 DTX2Q86UW9 622 aa2.78□□□□□ -1.96
CCDC39-203ENST00000473854 SLC17A8Q8NDX2 589 aa2.78□□□□□ -1.96
CCDC39-203ENST00000473854 TMEM204Q9BSN7 226 aa2.78□□□□□ -1.96
CCDC39-203ENST00000473854 FSD1LQ9BXM9 530 aa2.78□□□□□ -1.96
CCDC39-203ENST00000473854 SIK2Q9H0K1 926 aa2.78□□□□□ -1.96
CCDC39-203ENST00000473854 DUSP22Q9NRW4 184 aa2.78□□□□□ -1.96
CCDC39-203ENST00000473854 ADAMTS5Q9UNA0 930 aa2.78□□□□□ -1.96
CCDC39-203ENST00000473854 CHEK2O96017 543 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms