RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 RBM41Q96IZ5 413 aaKnown RBP8.11□□□□□ -1.11
CCDC171-205ENST00000472806 HINFPQ9BQA5 517 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 PI4K2AQ9BTU6 479 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 NIF3L1Q9GZT8 377 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 DPH5Q9H2P9 285 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 LRRC19Q9H756 370 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 TMBIM4Q9HC24 238 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 VTA1Q9NP79 307 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.11□□□□□ -1.11
CCDC171-205ENST00000472806 ERAP1Q9NZ08 941 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 STRIP2Q9ULQ0 834 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 OTOFQ9HC10 1997 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 LRRC37A2A6NM11 1700 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 CDC14CA4D256 554 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 IQCA1LA6NCM1 817 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 EIF3HO15372 352 aaKnown RBP eCLIP8.1□□□□□ -1.11
CCDC171-205ENST00000472806 STRNO43815 780 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 ZEB2O60315 1214 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 B4GALT4O60513 344 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 AP1G2O75843 785 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 GH1P01241 217 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 NUDT17P0C025 328 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 SRGAP2CP0DJJ0 459 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 PYGMP11217 842 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 HARSP12081 509 aaKnown RBP8.1□□□□□ -1.11
CCDC171-205ENST00000472806 EPHX2P34913 555 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 RDXP35241 583 aaKnown RBP8.1□□□□□ -1.11
CCDC171-205ENST00000472806 PTGIRP43119 386 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 PMS2P54278 862 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 GNGT1P63211 74 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 DHX9Q08211 1270 aaKnown RBP8.1□□□□□ -1.11
CCDC171-205ENST00000472806 PPP1R7Q15435 360 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 FAM187BQ17R55 369 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 ZNF568Q3ZCX4 644 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 SGO2Q562F6 1265 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 TTMPQ5BVD1 217 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 ATF7IP2Q5U623 682 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 LRRC38Q5VT99 294 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 WDR78Q5VTH9 848 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 DENND2CQ68D51 928 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 PLEKHA7Q6IQ23 1121 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 CCDC62Q6P9F0 684 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 MICALCLQ6ZW33 695 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 KATNAL2Q8IYT4 538 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 PRELID2Q8N945 189 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 ZNF784Q8NCA9 323 aaPredicted RBP8.1□□□□□ -1.11
CCDC171-205ENST00000472806 FEZF2Q8TBJ5 459 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 ZNF526Q8TF50 670 aaPredicted RBP8.1□□□□□ -1.11
CCDC171-205ENST00000472806 PIK3R5Q8WYR1 880 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 KRT35Q92764 455 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 OPTNQ96CV9 577 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 ZBTB45Q96K62 511 aaPredicted RBP8.1□□□□□ -1.11
CCDC171-205ENST00000472806 CELF4Q9BZC1 486 aaKnown RBP8.1□□□□□ -1.11
CCDC171-205ENST00000472806 FOXP3Q9BZS1 431 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 DNAI2Q9GZS0 605 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 MIS12Q9H081 205 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 FZD8Q9H461 694 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 PLEKHA4Q9H4M7 779 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 CNOT10Q9H9A5 744 aaKnown RBP8.1□□□□□ -1.11
CCDC171-205ENST00000472806 RPF1Q9H9Y2 349 aaKnown RBP8.1□□□□□ -1.11
CCDC171-205ENST00000472806 CUEDC1Q9NWM3 386 aaPredicted RBP8.1□□□□□ -1.11
CCDC171-205ENST00000472806 WHRNQ9P202 907 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 RBPJLQ9UBG7 517 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 CPSF3Q9UKF6 684 aaKnown RBP8.1□□□□□ -1.11
CCDC171-205ENST00000472806 TNFSF13BQ9Y275 285 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 SBF1O95248 1867 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 DOCK5Q9H7D0 1870 aa8.1□□□□□ -1.11
CCDC171-205ENST00000472806 MROH7Q68CQ1 1323 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 INO80B-WBP1J3KQ70 363 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 TLR3O15455 904 aaKnown RBP8.09□□□□□ -1.11
CCDC171-205ENST00000472806 KRT14P02533 472 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 PAEPP09466 180 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 MCF2P10911 925 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 CETPP11597 493 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 ITIH2P19823 946 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 PROZP22891 400 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 EIF4BP23588 611 aaKnown RBP8.09□□□□□ -1.11
CCDC171-205ENST00000472806 RRM1P23921 792 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 ATP5DP30049 168 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 ATICP31939 592 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 GCLCP48506 637 aaPredicted RBP8.09□□□□□ -1.11
CCDC171-205ENST00000472806 IRAK1P51617 712 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 ZNF132P52740 706 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 CDC42EP1Q00587 391 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 ADCY2Q08462 1091 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 FSTL1Q12841 308 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 PIGHQ14442 188 aaPredicted RBP8.09□□□□□ -1.11
CCDC171-205ENST00000472806 SKIV2LQ15477 1246 aaKnown RBP8.09□□□□□ -1.11
CCDC171-205ENST00000472806 ZNF699Q32M78 642 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 DNAJC21Q5F1R6 531 aaKnown RBP8.09□□□□□ -1.11
CCDC171-205ENST00000472806 C9orf131Q5VYM1 1079 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 LMBRD2Q68DH5 695 aaPredicted RBP8.09□□□□□ -1.11
CCDC171-205ENST00000472806 EFCAB12Q6NXP0 572 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 DNAJC24Q6P3W2 148 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 LRRC31Q6UY01 552 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 B4GALNT4Q76KP1 1039 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 TRMT10CQ7L0Y3 403 aaKnown RBP8.09□□□□□ -1.11
CCDC171-205ENST00000472806 EEPD1Q7L9B9 569 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 ADAT2Q7Z6V5 191 aaKnown RBP8.09□□□□□ -1.11
CCDC171-205ENST00000472806 PNMA8AQ86V59 439 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms