RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 TPD52L2O43399 206 aaKnown RBP5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 NCR1O76036 304 aa5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 ELANEP08246 267 aa5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 TSHRP16473 764 aa5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 KLRC1P26715 233 aa5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 VIPR2P41587 438 aa5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 WNT3P56703 355 aa5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 FAM189BP81408 668 aa5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 SATB1Q01826 763 aa5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 FPGSQ05932 587 aa5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 PREPLQ4J6C6 727 aaPredicted RBP5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 KLHDC7AQ5VTJ3 777 aa5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 IZUMO3Q5VZ72 239 aa5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 TAF2Q6P1X5 1199 aa5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 C1orf228Q6PIY5 440 aa5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 UNC13DQ70J99 1090 aa5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 SDR16C5Q8N3Y7 309 aa5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 ATP11CQ8NB49 1132 aa5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 OR56A3Q8NH54 315 aa5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 IL17DQ8TAD2 202 aa5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 POC1BQ8TC44 478 aa5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 ZNF483Q8TF39 744 aaPredicted RBP5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 IPCEF1Q8WWN9 437 aaPredicted RBP5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 RAPGEF4Q8WZA2 1011 aa5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 SPSB4Q96A44 273 aa5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 IQCDQ96DY2 449 aa5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 RNF31Q96EP0 1072 aa5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 LRIG1Q96JA1 1093 aa5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 ZC3H10Q96K80 434 aaKnown RBP5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 SNX22Q96L94 193 aa5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 HEPHQ9BQS7 1158 aa5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 ZNF768Q9H5H4 540 aaKnown RBP5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 CERS4Q9HA82 394 aa5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 ARFGAP3Q9NP61 516 aa5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 AKIP1Q9NQ31 210 aa5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 PLCB1Q9NQ66 1216 aa5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 VSX1Q9NZR4 365 aaPredicted RBP5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 CTTNBP2NLQ9P2B4 639 aa5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 HDAC9Q9UKV0 1011 aa5.88□□□□□ -1.47
PRPF40A-208ENST00000472760 E7ENX8 843 aa5.87□□□□□ -1.47
PRPF40A-208ENST00000472760 THAP12O43422 761 aa5.87□□□□□ -1.47
PRPF40A-208ENST00000472760 SOAT2O75908 522 aa5.87□□□□□ -1.47
PRPF40A-208ENST00000472760 SUN1O94901 812 aa5.87□□□□□ -1.47
PRPF40A-208ENST00000472760 NDUFA10O95299 355 aa5.87□□□□□ -1.47
PRPF40A-208ENST00000472760 MT-ND5P03915 603 aa5.87□□□□□ -1.47
PRPF40A-208ENST00000472760 CFIP05156 583 aa5.87□□□□□ -1.47
PRPF40A-208ENST00000472760 ANXA2P07355 339 aaKnown RBP5.87□□□□□ -1.47
PRPF40A-208ENST00000472760 ATXN1LP0C7T5 689 aaKnown RBP5.87□□□□□ -1.47
PRPF40A-208ENST00000472760 GCLCP48506 637 aaPredicted RBP5.87□□□□□ -1.47
PRPF40A-208ENST00000472760 CARSP49589 748 aaKnown RBP5.87□□□□□ -1.47
PRPF40A-208ENST00000472760 ANXA11P50995 505 aaKnown RBP5.87□□□□□ -1.47
PRPF40A-208ENST00000472760 CXADRP78310 365 aa5.87□□□□□ -1.47
PRPF40A-208ENST00000472760 TAP2Q03519 686 aa5.87□□□□□ -1.47
PRPF40A-208ENST00000472760 BOP1Q14137 746 aaKnown RBP5.87□□□□□ -1.47
PRPF40A-208ENST00000472760 SPDYAQ5MJ70 313 aa5.87□□□□□ -1.47
PRPF40A-208ENST00000472760 C10orf62Q5T681 223 aaPredicted RBP5.87□□□□□ -1.47
PRPF40A-208ENST00000472760 B3GNTL1Q67FW5 361 aaPredicted RBP5.87□□□□□ -1.47
PRPF40A-208ENST00000472760 HIBCHQ6NVY1 386 aaPredicted RBP5.87□□□□□ -1.47
PRPF40A-208ENST00000472760 LRRC55Q6ZSA7 311 aa5.87□□□□□ -1.47
PRPF40A-208ENST00000472760 RNF44Q7L0R7 432 aa5.87□□□□□ -1.47
PRPF40A-208ENST00000472760 ZNF276Q8N554 614 aa5.87□□□□□ -1.47
PRPF40A-208ENST00000472760 RNF152Q8N8N0 203 aa5.87□□□□□ -1.47
PRPF40A-208ENST00000472760 VPS37AQ8NEZ2 397 aa5.87□□□□□ -1.47
PRPF40A-208ENST00000472760 MORC4Q8TE76 937 aa5.87□□□□□ -1.47
PRPF40A-208ENST00000472760 BRI3BPQ8WY22 251 aa5.87□□□□□ -1.47
PRPF40A-208ENST00000472760 COLEC11Q9BWP8 271 aa5.87□□□□□ -1.47
PRPF40A-208ENST00000472760 ALOXE3Q9BYJ1 711 aa5.87□□□□□ -1.47
PRPF40A-208ENST00000472760 VPS11Q9H270 941 aa5.87□□□□□ -1.47
PRPF40A-208ENST00000472760 CHST8Q9H2A9 424 aa5.87□□□□□ -1.47
PRPF40A-208ENST00000472760 SMOC2Q9H3U7 446 aa5.87□□□□□ -1.47
PRPF40A-208ENST00000472760 ZNF703Q9H7S9 590 aaPredicted RBP5.87□□□□□ -1.47
PRPF40A-208ENST00000472760 CEP83Q9Y592 693 aa5.87□□□□□ -1.47
PRPF40A-208ENST00000472760 PRAMEF33A0A0G2JMD5 474 aa5.86□□□□□ -1.47
PRPF40A-208ENST00000472760 PLSCR1O15162 318 aa5.86□□□□□ -1.47
PRPF40A-208ENST00000472760 PRAMEF10O60809 474 aa5.86□□□□□ -1.47
PRPF40A-208ENST00000472760 TXNP10599 105 aaKnown RBP5.86□□□□□ -1.47
PRPF40A-208ENST00000472760 ZNF20P17024 532 aa5.86□□□□□ -1.47
PRPF40A-208ENST00000472760 ITGALP20701 1170 aa5.86□□□□□ -1.47
PRPF40A-208ENST00000472760 TOB1P50616 345 aaPredicted RBP5.86□□□□□ -1.47
PRPF40A-208ENST00000472760 RPS7P62081 194 aaKnown RBP5.86□□□□□ -1.47
PRPF40A-208ENST00000472760 ADAM17P78536 824 aa5.86□□□□□ -1.47
PRPF40A-208ENST00000472760 HTRA4P83105 476 aaPredicted RBP5.86□□□□□ -1.47
PRPF40A-208ENST00000472760 RESTQ13127 1097 aa5.86□□□□□ -1.47
PRPF40A-208ENST00000472760 DYRK1AQ13627 763 aa5.86□□□□□ -1.47
PRPF40A-208ENST00000472760 ARL13BQ3SXY8 428 aa5.86□□□□□ -1.47
PRPF40A-208ENST00000472760 ARMC6Q6NXE6 501 aa5.86□□□□□ -1.47
PRPF40A-208ENST00000472760 BEND5Q7L4P6 421 aa5.86□□□□□ -1.47
PRPF40A-208ENST00000472760 YAF2Q8IY57 180 aa5.86□□□□□ -1.47
PRPF40A-208ENST00000472760 Q8NA96 180 aa5.86□□□□□ -1.47
PRPF40A-208ENST00000472760 BOD1Q96IK1 185 aa5.86□□□□□ -1.47
PRPF40A-208ENST00000472760 ARPC5LQ9BPX5 153 aa5.86□□□□□ -1.47
PRPF40A-208ENST00000472760 GALNT9Q9HCQ5 603 aa5.86□□□□□ -1.47
PRPF40A-208ENST00000472760 TBC1D23Q9NUY8 699 aa5.86□□□□□ -1.47
PRPF40A-208ENST00000472760 CEP72Q9P209 647 aa5.86□□□□□ -1.47
PRPF40A-208ENST00000472760 ZNF212Q9UDV6 495 aa5.86□□□□□ -1.47
PRPF40A-208ENST00000472760 SHOC2Q9UQ13 582 aa5.86□□□□□ -1.47
PRPF40A-208ENST00000472760 LRCH1Q9Y2L9 728 aa5.86□□□□□ -1.47
PRPF40A-208ENST00000472760 TSC22D4Q9Y3Q8 395 aa5.86□□□□□ -1.47
PRPF40A-208ENST00000472760 KRTAP4-8A0A0G2JLE6 195 aa5.85□□□□□ -1.47
PRPF40A-208ENST00000472760 ABHD14A-ACY1A0A1B0GW23 586 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms