RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 A0A1W2PRU2 124 aa20.86■□□□□ 0.93
COMMD1-208ENST00000472729 KLRC4O43908 158 aa20.86■□□□□ 0.93
COMMD1-208ENST00000472729 SOAT2O75908 522 aa20.86■□□□□ 0.93
COMMD1-208ENST00000472729 AOC1P19801 751 aa20.86■□□□□ 0.93
COMMD1-208ENST00000472729 AP3M2P53677 418 aa20.86■□□□□ 0.93
COMMD1-208ENST00000472729 BIRC3Q13489 604 aa20.86■□□□□ 0.93
COMMD1-208ENST00000472729 TEAD2Q15562 447 aa20.86■□□□□ 0.93
COMMD1-208ENST00000472729 FAM78AQ5JUQ0 283 aa20.86■□□□□ 0.93
COMMD1-208ENST00000472729 SPATA2LQ8IUW3 424 aaPredicted RBP20.86■□□□□ 0.93
COMMD1-208ENST00000472729 YAF2Q8IY57 180 aa20.86■□□□□ 0.93
COMMD1-208ENST00000472729 E2F7Q96AV8 911 aa20.86■□□□□ 0.93
COMMD1-208ENST00000472729 TRMT61BQ9BVS5 477 aaKnown RBP20.86■□□□□ 0.93
COMMD1-208ENST00000472729 CRISPLD1Q9H336 500 aa20.86■□□□□ 0.93
COMMD1-208ENST00000472729 SNX25Q9H3E2 840 aa20.86■□□□□ 0.93
COMMD1-208ENST00000472729 HOOK1Q9UJC3 728 aaKnown RBP20.86■□□□□ 0.93
COMMD1-208ENST00000472729 VWA8A3KMH1 1905 aa20.85■□□□□ 0.93
COMMD1-208ENST00000472729 PDXKO00764 312 aa20.85■□□□□ 0.93
COMMD1-208ENST00000472729 DPYSL4O14531 572 aa20.85■□□□□ 0.93
COMMD1-208ENST00000472729 GJA1P17302 382 aa20.85■□□□□ 0.93
COMMD1-208ENST00000472729 ACAT1P24752 427 aaKnown RBP20.85■□□□□ 0.93
COMMD1-208ENST00000472729 CDC25CP30307 473 aa20.85■□□□□ 0.93
COMMD1-208ENST00000472729 CCR2P41597 374 aa20.85■□□□□ 0.93
COMMD1-208ENST00000472729 EPHA5P54756 1037 aa20.85■□□□□ 0.93
COMMD1-208ENST00000472729 RPL10AP62906 217 aaKnown RBP20.85■□□□□ 0.93
COMMD1-208ENST00000472729 SNW1Q13573 536 aaKnown RBP20.85■□□□□ 0.93
COMMD1-208ENST00000472729 MAPRE1Q15691 268 aaKnown RBP20.85■□□□□ 0.93
COMMD1-208ENST00000472729 TTC9BQ8N6N2 239 aa20.85■□□□□ 0.93
COMMD1-208ENST00000472729 TMEM105Q8N8V8 129 aa20.85■□□□□ 0.93
COMMD1-208ENST00000472729 ZSCAN18Q8TBC5 510 aaPredicted RBP20.85■□□□□ 0.93
COMMD1-208ENST00000472729 ATOH1Q92858 354 aaPredicted RBP20.85■□□□□ 0.93
COMMD1-208ENST00000472729 FAM84AQ96KN4 292 aa20.85■□□□□ 0.93
COMMD1-208ENST00000472729 PI4K2AQ9BTU6 479 aa20.85■□□□□ 0.93
COMMD1-208ENST00000472729 BRD9Q9H8M2 597 aa20.85■□□□□ 0.93
COMMD1-208ENST00000472729 TBC1D17Q9HA65 648 aa20.85■□□□□ 0.93
COMMD1-208ENST00000472729 GALR2O43603 387 aaPredicted RBP20.84■□□□□ 0.93
COMMD1-208ENST00000472729 VNN2O95498 520 aa20.84■□□□□ 0.93
COMMD1-208ENST00000472729 HAPLN1P10915 354 aaPredicted RBP20.84■□□□□ 0.93
COMMD1-208ENST00000472729 GABRR2P28476 465 aa20.84■□□□□ 0.93
COMMD1-208ENST00000472729 SOWAHAQ2M3V2 549 aa20.84■□□□□ 0.93
COMMD1-208ENST00000472729 WDR72Q3MJ13 1102 aa20.84■□□□□ 0.93
COMMD1-208ENST00000472729 SLC44A4Q53GD3 710 aa20.84■□□□□ 0.93
COMMD1-208ENST00000472729 INTS6LQ5JSJ4 861 aaKnown RBP20.84■□□□□ 0.93
COMMD1-208ENST00000472729 CEP135Q66GS9 1140 aa20.84■□□□□ 0.93
COMMD1-208ENST00000472729 TANGO2Q6ICL3 276 aa20.84■□□□□ 0.93
COMMD1-208ENST00000472729 C4orf50Q6ZRC1 276 aa20.84■□□□□ 0.93
COMMD1-208ENST00000472729 LRRTM3Q86VH5 581 aa20.84■□□□□ 0.93
COMMD1-208ENST00000472729 KIAA0895Q8NCT3 520 aa20.84■□□□□ 0.93
COMMD1-208ENST00000472729 GIPC2Q8TF65 315 aa20.84■□□□□ 0.93
COMMD1-208ENST00000472729 SYAP1Q96A49 352 aaPredicted RBP20.84■□□□□ 0.93
COMMD1-208ENST00000472729 ASB16Q96NS5 453 aa20.84■□□□□ 0.93
COMMD1-208ENST00000472729 LPIN3Q9BQK8 851 aa20.84■□□□□ 0.93
COMMD1-208ENST00000472729 DNAJC25Q9H1X3 360 aa20.84■□□□□ 0.93
COMMD1-208ENST00000472729 RMND1Q9NWS8 449 aa20.84■□□□□ 0.93
COMMD1-208ENST00000472729 SIT1Q9Y3P8 196 aa20.84■□□□□ 0.93
COMMD1-208ENST00000472729 TRIP11Q15643 1979 aa20.84■□□□□ 0.93
COMMD1-208ENST00000472729 PTPRJQ12913 1337 aa20.83■□□□□ 0.93
COMMD1-208ENST00000472729 KRBA1A5PL33 1030 aa20.83■□□□□ 0.93
COMMD1-208ENST00000472729 NR3C1P04150 777 aa20.83■□□□□ 0.93
COMMD1-208ENST00000472729 PSMC3P17980 439 aa20.83■□□□□ 0.93
COMMD1-208ENST00000472729 RPL13P26373 211 aaKnown RBP20.83■□□□□ 0.93
COMMD1-208ENST00000472729 NHLH1Q02575 133 aa20.83■□□□□ 0.93
COMMD1-208ENST00000472729 PRKCQQ04759 706 aa20.83■□□□□ 0.93
COMMD1-208ENST00000472729 PHLDB3Q6NSJ2 640 aa20.83■□□□□ 0.93
COMMD1-208ENST00000472729 PRSS33Q8NF86 280 aa20.83■□□□□ 0.93
COMMD1-208ENST00000472729 CXorf38Q8TB03 319 aa20.83■□□□□ 0.93
COMMD1-208ENST00000472729 SHKBP1Q8TBC3 707 aa20.83■□□□□ 0.93
COMMD1-208ENST00000472729 IRF7Q92985 503 aa20.83■□□□□ 0.93
COMMD1-208ENST00000472729 ABCB6Q9NP58 842 aa20.83■□□□□ 0.93
COMMD1-208ENST00000472729 GTF3C4Q9UKN8 822 aa20.83■□□□□ 0.93
COMMD1-208ENST00000472729 CDH9Q9ULB4 789 aa20.83■□□□□ 0.93
COMMD1-208ENST00000472729 ZNF263O14978 683 aa20.82■□□□□ 0.92
COMMD1-208ENST00000472729 RHOBTB3O94955 611 aa20.82■□□□□ 0.92
COMMD1-208ENST00000472729 NPR3P17342 541 aa20.82■□□□□ 0.92
COMMD1-208ENST00000472729 ATICP31939 592 aa20.82■□□□□ 0.92
COMMD1-208ENST00000472729 GNL1P36915 607 aaPredicted RBP20.82■□□□□ 0.92
COMMD1-208ENST00000472729 DPYDQ12882 1025 aa20.82■□□□□ 0.92
COMMD1-208ENST00000472729 GRM2Q14416 872 aa20.82■□□□□ 0.92
COMMD1-208ENST00000472729 MLF2Q15773 248 aaPredicted RBP20.82■□□□□ 0.92
COMMD1-208ENST00000472729 GPR158Q5T848 1215 aa20.82■□□□□ 0.92
COMMD1-208ENST00000472729 CWF19L1Q69YN2 538 aaKnown RBP20.82■□□□□ 0.92
COMMD1-208ENST00000472729 SLC9A9Q8IVB4 645 aa20.82■□□□□ 0.92
COMMD1-208ENST00000472729 OR6B3Q8NGW1 331 aa20.82■□□□□ 0.92
COMMD1-208ENST00000472729 DEPDC1BQ8WUY9 529 aa20.82■□□□□ 0.92
COMMD1-208ENST00000472729 ZSWIM3Q96MP5 696 aa20.82■□□□□ 0.92
COMMD1-208ENST00000472729 GOLPH3LQ9H4A5 285 aa20.82■□□□□ 0.92
COMMD1-208ENST00000472729 NXF1Q9UBU9 619 aaKnown RBP20.82■□□□□ 0.92
COMMD1-208ENST00000472729 ZMYM5Q9UJ78 669 aa20.82■□□□□ 0.92
COMMD1-208ENST00000472729 MAGED2Q9UNF1 606 aaPredicted RBP20.82■□□□□ 0.92
COMMD1-208ENST00000472729 MAPK8IP1Q9UQF2 711 aa20.82■□□□□ 0.92
COMMD1-208ENST00000472729 MRPS17Q9Y2R5 130 aaKnown RBP20.82■□□□□ 0.92
COMMD1-208ENST00000472729 DENND4AQ7Z401 1863 aa20.81■□□□□ 0.92
COMMD1-208ENST00000472729 C2orf16Q68DN1 1984 aa20.81■□□□□ 0.92
COMMD1-208ENST00000472729 MTCL1Q9Y4B5 1905 aaKnown RBP20.81■□□□□ 0.92
COMMD1-208ENST00000472729 H0Y858 1186 aa20.81■□□□□ 0.92
COMMD1-208ENST00000472729 SMC2O95347 1197 aa20.81■□□□□ 0.92
COMMD1-208ENST00000472729 CST3P01034 146 aaPredicted RBP20.81■□□□□ 0.92
COMMD1-208ENST00000472729 PDGFRBP09619 1106 aa20.81■□□□□ 0.92
COMMD1-208ENST00000472729 PRR29P0C7W0 189 aa20.81■□□□□ 0.92
COMMD1-208ENST00000472729 CSH1P0DML2 217 aa20.81■□□□□ 0.92
COMMD1-208ENST00000472729 CSH2P0DML3 217 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms