RNA–Protein interactions for RNA: ENST00000472588.5

PAXBP1-208, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,410 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-208ENST00000472588 PUF60Q9UHX1 559 aaKnown RBP23.76■■□□□ 1.39
PAXBP1-208ENST00000472588 EPN1Q9Y6I3 576 aaPredicted RBP23.76■■□□□ 1.39
PAXBP1-208ENST00000472588 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.76■■□□□ 1.39
PAXBP1-208ENST00000472588 THAP12O43422 761 aa23.75■■□□□ 1.39
PAXBP1-208ENST00000472588 PLEKP08567 350 aaPredicted RBP23.75■■□□□ 1.39
PAXBP1-208ENST00000472588 FAM171A1Q5VUB5 890 aa23.75■■□□□ 1.39
PAXBP1-208ENST00000472588 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.75■■□□□ 1.39
PAXBP1-208ENST00000472588 NOP9Q86U38 636 aaKnown RBP23.75■■□□□ 1.39
PAXBP1-208ENST00000472588 GPIHBP1Q8IV16 184 aa23.75■■□□□ 1.39
PAXBP1-208ENST00000472588 SLC39A11Q8N1S5 342 aa23.75■■□□□ 1.39
PAXBP1-208ENST00000472588 CLP1Q92989 425 aaKnown RBP23.75■■□□□ 1.39
PAXBP1-208ENST00000472588 ACBD6Q9BR61 282 aa23.75■■□□□ 1.39
PAXBP1-208ENST00000472588 OXCT2Q9BYC2 517 aaPredicted RBP23.75■■□□□ 1.39
PAXBP1-208ENST00000472588 PDCL3Q9H2J4 239 aa23.75■■□□□ 1.39
PAXBP1-208ENST00000472588 NOCTQ9UK39 431 aaKnown RBP23.75■■□□□ 1.39
PAXBP1-208ENST00000472588 CD19P15391 556 aa23.74■■□□□ 1.39
PAXBP1-208ENST00000472588 KIF11P52732 1056 aa23.74■■□□□ 1.39
PAXBP1-208ENST00000472588 SPA17Q15506 151 aa23.74■■□□□ 1.39
PAXBP1-208ENST00000472588 SLC18A3Q16572 532 aa23.74■■□□□ 1.39
PAXBP1-208ENST00000472588 SGO2Q562F6 1265 aa23.74■■□□□ 1.39
PAXBP1-208ENST00000472588 ZNF606Q8WXB4 792 aa23.74■■□□□ 1.39
PAXBP1-208ENST00000472588 TWNKQ96RR1 684 aa23.74■■□□□ 1.39
PAXBP1-208ENST00000472588 LUC7LQ9NQ29 371 aaKnown RBP23.74■■□□□ 1.39
PAXBP1-208ENST00000472588 CDH9Q9ULB4 789 aa23.74■■□□□ 1.39
PAXBP1-208ENST00000472588 TIMM13Q9Y5L4 95 aaPredicted RBP23.74■■□□□ 1.39
PAXBP1-208ENST00000472588 TSC2P49815 1807 aa23.73■■□□□ 1.39
PAXBP1-208ENST00000472588 EIF3CLB5ME19 914 aaKnown RBP23.73■■□□□ 1.39
PAXBP1-208ENST00000472588 OAZ2O95190 189 aa23.73■■□□□ 1.39
PAXBP1-208ENST00000472588 NDUFA10O95299 355 aa23.73■■□□□ 1.39
PAXBP1-208ENST00000472588 PDGFRBP09619 1106 aa23.73■■□□□ 1.39
PAXBP1-208ENST00000472588 FGFR3P22607 806 aa23.73■■□□□ 1.39
PAXBP1-208ENST00000472588 PBX3P40426 434 aa23.73■■□□□ 1.39
PAXBP1-208ENST00000472588 KRT17Q04695 432 aa23.73■■□□□ 1.39
PAXBP1-208ENST00000472588 ASTE1Q2TB18 679 aaPredicted RBP23.73■■□□□ 1.39
PAXBP1-208ENST00000472588 PPP1R2P3Q6NXS1 205 aa23.73■■□□□ 1.39
PAXBP1-208ENST00000472588 TRIM72Q6ZMU5 477 aa23.73■■□□□ 1.39
PAXBP1-208ENST00000472588 DDX1Q92499 740 aaKnown RBP23.73■■□□□ 1.39
PAXBP1-208ENST00000472588 EIF3CQ99613 913 aaKnown RBP23.73■■□□□ 1.39
PAXBP1-208ENST00000472588 SYT11Q9BT88 431 aa23.73■■□□□ 1.39
PAXBP1-208ENST00000472588 GPR62Q9BZJ7 368 aa23.73■■□□□ 1.39
PAXBP1-208ENST00000472588 ACP6Q9NPH0 428 aa23.73■■□□□ 1.39
PAXBP1-208ENST00000472588 HMGXB4Q9UGU5 601 aa23.73■■□□□ 1.39
PAXBP1-208ENST00000472588 ADAMTS1Q9UHI8 967 aa23.73■■□□□ 1.39
PAXBP1-208ENST00000472588 LAMA2P24043 3122 aaKnown RBP23.72■■□□□ 1.39
PAXBP1-208ENST00000472588 KIAA1671Q9BY89 1806 aa23.72■■□□□ 1.39
PAXBP1-208ENST00000472588 LMO2P25791 158 aa23.72■■□□□ 1.39
PAXBP1-208ENST00000472588 KRT83P78385 493 aa23.72■■□□□ 1.39
PAXBP1-208ENST00000472588 USP41Q3LFD5 358 aa23.72■■□□□ 1.39
PAXBP1-208ENST00000472588 C10orf76Q5T2E6 689 aa23.72■■□□□ 1.39
PAXBP1-208ENST00000472588 RAD9BQ6WBX8 426 aa23.72■■□□□ 1.39
PAXBP1-208ENST00000472588 ACOT1Q86TX2 421 aa23.72■■□□□ 1.39
PAXBP1-208ENST00000472588 OSTM1Q86WC4 334 aa23.72■■□□□ 1.39
PAXBP1-208ENST00000472588 B3GALNT2Q8NCR0 500 aa23.72■■□□□ 1.39
PAXBP1-208ENST00000472588 TTPALQ9BTX7 342 aa23.72■■□□□ 1.39
PAXBP1-208ENST00000472588 SEPT11Q9NVA2 429 aaKnown RBP23.72■■□□□ 1.39
PAXBP1-208ENST00000472588 PCDHGC3Q9UN70 934 aa23.72■■□□□ 1.39
PAXBP1-208ENST00000472588 CEP83Q9Y592 693 aa23.72■■□□□ 1.39
PAXBP1-208ENST00000472588 H7C4K7 107 aa23.71■■□□□ 1.39
PAXBP1-208ENST00000472588 TKTP29401 623 aaKnown RBP23.71■■□□□ 1.39
PAXBP1-208ENST00000472588 MAPRE1Q15691 268 aaKnown RBP23.71■■□□□ 1.39
PAXBP1-208ENST00000472588 CNGA2Q16280 664 aa23.71■■□□□ 1.39
PAXBP1-208ENST00000472588 LRIT3Q3SXY7 679 aa23.71■■□□□ 1.39
PAXBP1-208ENST00000472588 TAF3Q5VWG9 929 aa23.71■■□□□ 1.39
PAXBP1-208ENST00000472588 ANKS3Q6ZW76 656 aa23.71■■□□□ 1.39
PAXBP1-208ENST00000472588 TMEM173Q86WV6 379 aaPredicted RBP23.71■■□□□ 1.39
PAXBP1-208ENST00000472588 CEP57Q86XR8 500 aa23.71■■□□□ 1.39
PAXBP1-208ENST00000472588 GLYCTKQ8IVS8 523 aa23.71■■□□□ 1.39
PAXBP1-208ENST00000472588 TXLNBQ8N3L3 684 aa23.71■■□□□ 1.39
PAXBP1-208ENST00000472588 SLC20A1Q8WUM9 679 aa23.71■■□□□ 1.39
PAXBP1-208ENST00000472588 SYT15Q9BQS2 421 aa23.71■■□□□ 1.39
PAXBP1-208ENST00000472588 LAMA3Q16787 3333 aa23.7■■□□□ 1.39
PAXBP1-208ENST00000472588 LCA5LO95447 670 aa23.7■■□□□ 1.38
PAXBP1-208ENST00000472588 EFEMP2O95967 443 aa23.7■■□□□ 1.38
PAXBP1-208ENST00000472588 SOD2P04179 222 aa23.7■■□□□ 1.38
PAXBP1-208ENST00000472588 MMEP08473 750 aa23.7■■□□□ 1.38
PAXBP1-208ENST00000472588 PTPN1P18031 435 aaKnown RBP23.7■■□□□ 1.38
PAXBP1-208ENST00000472588 TSPY1Q01534 308 aa23.7■■□□□ 1.38
PAXBP1-208ENST00000472588 FMO1Q01740 532 aa23.7■■□□□ 1.38
PAXBP1-208ENST00000472588 ORC1Q13415 861 aa23.7■■□□□ 1.38
PAXBP1-208ENST00000472588 VARS2Q5ST30 1063 aaKnown RBP23.7■■□□□ 1.38
PAXBP1-208ENST00000472588 ZNF280DQ6N043 979 aa23.7■■□□□ 1.38
PAXBP1-208ENST00000472588 KIAA1841Q6NSI8 718 aa23.7■■□□□ 1.38
PAXBP1-208ENST00000472588 DDX53Q86TM3 631 aaKnown RBP23.7■■□□□ 1.38
PAXBP1-208ENST00000472588 RNF168Q8IYW5 571 aaPredicted RBP23.7■■□□□ 1.38
PAXBP1-208ENST00000472588 SLC30A5Q8TAD4 765 aa23.7■■□□□ 1.38
PAXBP1-208ENST00000472588 PLVAPQ9BX97 442 aa23.7■■□□□ 1.38
PAXBP1-208ENST00000472588 PCDHA11Q9Y5I1 949 aa23.7■■□□□ 1.38
PAXBP1-208ENST00000472588 A0A087X0T9 212 aa23.69■■□□□ 1.38
PAXBP1-208ENST00000472588 FAM228BP0C875 321 aa23.69■■□□□ 1.38
PAXBP1-208ENST00000472588 GZMAP12544 262 aa23.69■■□□□ 1.38
PAXBP1-208ENST00000472588 CHRNB2P17787 502 aa23.69■■□□□ 1.38
PAXBP1-208ENST00000472588 BRD2P25440 801 aaKnown RBP23.69■■□□□ 1.38
PAXBP1-208ENST00000472588 PLCB3Q01970 1234 aa23.69■■□□□ 1.38
PAXBP1-208ENST00000472588 GFPT1Q06210 699 aaPredicted RBP23.69■■□□□ 1.38
PAXBP1-208ENST00000472588 MRPL58Q14197 206 aaKnown RBP23.69■■□□□ 1.38
PAXBP1-208ENST00000472588 MTF1Q14872 753 aa23.69■■□□□ 1.38
PAXBP1-208ENST00000472588 ARHGAP17Q68EM7 881 aa23.69■■□□□ 1.38
PAXBP1-208ENST00000472588 BCL7CQ8WUZ0 217 aaPredicted RBP23.69■■□□□ 1.38
PAXBP1-208ENST00000472588 CYFIP2Q96F07 1278 aa23.69■■□□□ 1.38
PAXBP1-208ENST00000472588 ZNF518BQ9C0D4 1074 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms