RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 SLFN14P0C7P3 912 aa12.4□□□□□ -0.42
COL4A3-205ENST00000471862 HAPLN1P10915 354 aaPredicted RBP12.4□□□□□ -0.42
COL4A3-205ENST00000471862 RFX1P22670 979 aa12.4□□□□□ -0.42
COL4A3-205ENST00000471862 AFMP43652 599 aa12.4□□□□□ -0.42
COL4A3-205ENST00000471862 TUFMP49411 452 aaKnown RBP12.4□□□□□ -0.42
COL4A3-205ENST00000471862 SNRPFP62306 86 aaKnown RBP12.4□□□□□ -0.42
COL4A3-205ENST00000471862 RBP5P82980 135 aa12.4□□□□□ -0.42
COL4A3-205ENST00000471862 BFSP1Q12934 665 aa12.4□□□□□ -0.42
COL4A3-205ENST00000471862 ANGPT1Q15389 498 aa12.4□□□□□ -0.42
COL4A3-205ENST00000471862 SURF1Q15526 300 aa12.4□□□□□ -0.42
COL4A3-205ENST00000471862 OSTM1Q86WC4 334 aa12.4□□□□□ -0.42
COL4A3-205ENST00000471862 C12orf56Q8IXR9 622 aa12.4□□□□□ -0.42
COL4A3-205ENST00000471862 GRAMD1CQ8IYS0 662 aa12.4□□□□□ -0.42
COL4A3-205ENST00000471862 TMEM86AQ8N2M4 240 aa12.4□□□□□ -0.42
COL4A3-205ENST00000471862 CSGALNACT2Q8N6G5 542 aa12.4□□□□□ -0.42
COL4A3-205ENST00000471862 ZSCAN18Q8TBC5 510 aaPredicted RBP12.4□□□□□ -0.42
COL4A3-205ENST00000471862 SPATA18Q8TC71 538 aa12.4□□□□□ -0.42
COL4A3-205ENST00000471862 DEPDC1BQ8WUY9 529 aa12.4□□□□□ -0.42
COL4A3-205ENST00000471862 LEO1Q8WVC0 666 aaPredicted RBP12.4□□□□□ -0.42
COL4A3-205ENST00000471862 DNASE1L2Q92874 299 aa12.4□□□□□ -0.42
COL4A3-205ENST00000471862 ANKRD36BP1Q96IX9 119 aa12.4□□□□□ -0.42
COL4A3-205ENST00000471862 CHAMP1Q96JM3 812 aa12.4□□□□□ -0.42
COL4A3-205ENST00000471862 PKMYT1Q99640 499 aa12.4□□□□□ -0.42
COL4A3-205ENST00000471862 LPIN3Q9BQK8 851 aa12.4□□□□□ -0.42
COL4A3-205ENST00000471862 OSBPL6Q9BZF3 934 aa12.4□□□□□ -0.42
COL4A3-205ENST00000471862 GPR88Q9GZN0 384 aa12.4□□□□□ -0.42
COL4A3-205ENST00000471862 IL21Q9HBE4 155 aa12.4□□□□□ -0.42
COL4A3-205ENST00000471862 HPSEQ9Y251 543 aa12.4□□□□□ -0.42
COL4A3-205ENST00000471862 PTPRDP23468 1912 aa12.4□□□□□ -0.42
COL4A3-205ENST00000471862 GREB1Q4ZG55 1949 aa12.39□□□□□ -0.43
COL4A3-205ENST00000471862 FAM237AA0A1B0GTK4 181 aa12.39□□□□□ -0.43
COL4A3-205ENST00000471862 GABRDO14764 452 aa12.39□□□□□ -0.43
COL4A3-205ENST00000471862 HUS1O60921 280 aa12.39□□□□□ -0.43
COL4A3-205ENST00000471862 VIPR2P41587 438 aa12.39□□□□□ -0.43
COL4A3-205ENST00000471862 GRM2Q14416 872 aa12.39□□□□□ -0.43
COL4A3-205ENST00000471862 PSMD6Q15008 389 aa12.39□□□□□ -0.43
COL4A3-205ENST00000471862 DUOXA2Q1HG44 320 aa12.39□□□□□ -0.43
COL4A3-205ENST00000471862 MGAT5BQ3V5L5 792 aa12.39□□□□□ -0.43
COL4A3-205ENST00000471862 INTS6LQ5JSJ4 861 aaKnown RBP12.39□□□□□ -0.43
COL4A3-205ENST00000471862 STXBP5Q5T5C0 1151 aa12.39□□□□□ -0.43
COL4A3-205ENST00000471862 ITIH5Q86UX2 942 aa12.39□□□□□ -0.43
COL4A3-205ENST00000471862 WDR49Q8IV35 697 aa12.39□□□□□ -0.43
COL4A3-205ENST00000471862 MFSD6LQ8IWD5 586 aa12.39□□□□□ -0.43
COL4A3-205ENST00000471862 NELFCDQ8IXH7 590 aa12.39□□□□□ -0.43
COL4A3-205ENST00000471862 DCP1BQ8IZD4 617 aaKnown RBP12.39□□□□□ -0.43
COL4A3-205ENST00000471862 TOP6BLQ8N6T0 577 aa12.39□□□□□ -0.43
COL4A3-205ENST00000471862 NOC3LQ8WTT2 800 aaKnown RBP12.39□□□□□ -0.43
COL4A3-205ENST00000471862 RSPRY1Q96DX4 576 aa12.39□□□□□ -0.43
COL4A3-205ENST00000471862 SEPT5Q99719 369 aaPredicted RBP12.39□□□□□ -0.43
COL4A3-205ENST00000471862 ACBD6Q9BR61 282 aa12.39□□□□□ -0.43
COL4A3-205ENST00000471862 GZF1Q9H116 711 aaPredicted RBP12.39□□□□□ -0.43
COL4A3-205ENST00000471862 SLC39A2Q9NP94 309 aa12.39□□□□□ -0.43
COL4A3-205ENST00000471862 LTB4R2Q9NPC1 389 aa12.39□□□□□ -0.43
COL4A3-205ENST00000471862 TRPV5Q9NQA5 729 aa12.39□□□□□ -0.43
COL4A3-205ENST00000471862 MTF2Q9Y483 593 aaPredicted RBP12.39□□□□□ -0.43
COL4A3-205ENST00000471862 SNX9Q9Y5X1 595 aa12.39□□□□□ -0.43
COL4A3-205ENST00000471862 A0A1B0GVL5 298 aa12.38□□□□□ -0.43
COL4A3-205ENST00000471862 HEPACAM2A8MVW5 462 aa12.38□□□□□ -0.43
COL4A3-205ENST00000471862 ARNTLO00327 626 aa12.38□□□□□ -0.43
COL4A3-205ENST00000471862 CLIC2O15247 247 aa12.38□□□□□ -0.43
COL4A3-205ENST00000471862 FGF19O95750 216 aa12.38□□□□□ -0.43
COL4A3-205ENST00000471862 TNNC2P02585 160 aa12.38□□□□□ -0.43
COL4A3-205ENST00000471862 KRT19P08727 400 aa12.38□□□□□ -0.43
COL4A3-205ENST00000471862 PFKFB1P16118 471 aa12.38□□□□□ -0.43
COL4A3-205ENST00000471862 HMGA1P17096 107 aaKnown RBP12.38□□□□□ -0.43
COL4A3-205ENST00000471862 PSMC3P17980 439 aa12.38□□□□□ -0.43
COL4A3-205ENST00000471862 CMA1P23946 247 aa12.38□□□□□ -0.43
COL4A3-205ENST00000471862 TARSP26639 723 aaKnown RBP12.38□□□□□ -0.43
COL4A3-205ENST00000471862 GABRR2P28476 465 aa12.38□□□□□ -0.43
COL4A3-205ENST00000471862 WEE1P30291 646 aa12.38□□□□□ -0.43
COL4A3-205ENST00000471862 CDR1P51861 262 aa12.38□□□□□ -0.43
COL4A3-205ENST00000471862 TSPY1Q01534 308 aa12.38□□□□□ -0.43
COL4A3-205ENST00000471862 CYP24A1Q07973 514 aa12.38□□□□□ -0.43
COL4A3-205ENST00000471862 FZD5Q13467 585 aa12.38□□□□□ -0.43
COL4A3-205ENST00000471862 SNRNP35Q16560 246 aaKnown RBP12.38□□□□□ -0.43
COL4A3-205ENST00000471862 NFE2Q16621 373 aaPredicted RBP12.38□□□□□ -0.43
COL4A3-205ENST00000471862 SOWAHAQ2M3V2 549 aa12.38□□□□□ -0.43
COL4A3-205ENST00000471862 TPRG1Q6ZUI0 275 aa12.38□□□□□ -0.43
COL4A3-205ENST00000471862 DPH6Q7L8W6 267 aa12.38□□□□□ -0.43
COL4A3-205ENST00000471862 TRAPPC11Q7Z392 1133 aa12.38□□□□□ -0.43
COL4A3-205ENST00000471862 CEP57L1Q8IYX8 460 aa12.38□□□□□ -0.43
COL4A3-205ENST00000471862 ADGRF2Q8IZF7 708 aa12.38□□□□□ -0.43
COL4A3-205ENST00000471862 ZNF687Q8N1G0 1237 aa12.38□□□□□ -0.43
COL4A3-205ENST00000471862 XXYLT1Q8NBI6 393 aa12.38□□□□□ -0.43
COL4A3-205ENST00000471862 KIAA0895Q8NCT3 520 aa12.38□□□□□ -0.43
COL4A3-205ENST00000471862 KBTBD7Q8WVZ9 684 aa12.38□□□□□ -0.43
COL4A3-205ENST00000471862 E2F7Q96AV8 911 aa12.38□□□□□ -0.43
COL4A3-205ENST00000471862 PAGE5Q96GU1 130 aa12.38□□□□□ -0.43
COL4A3-205ENST00000471862 CGRRF1Q99675 332 aa12.38□□□□□ -0.43
COL4A3-205ENST00000471862 TRMT61BQ9BVS5 477 aaKnown RBP12.38□□□□□ -0.43
COL4A3-205ENST00000471862 BRD9Q9H8M2 597 aa12.38□□□□□ -0.43
COL4A3-205ENST00000471862 HEBP1Q9NRV9 189 aa12.38□□□□□ -0.43
COL4A3-205ENST00000471862 DDX43Q9NXZ2 648 aaKnown RBP12.38□□□□□ -0.43
COL4A3-205ENST00000471862 ABI2Q9NYB9 513 aaPredicted RBP12.38□□□□□ -0.43
COL4A3-205ENST00000471862 CGNQ9P2M7 1197 aaKnown RBP12.38□□□□□ -0.43
COL4A3-205ENST00000471862 PCDHB5Q9Y5E4 795 aa12.38□□□□□ -0.43
COL4A3-205ENST00000471862 ANAPC1Q9H1A4 1944 aa12.37□□□□□ -0.43
COL4A3-205ENST00000471862 HCRTO43612 131 aa12.37□□□□□ -0.43
COL4A3-205ENST00000471862 GFRA3O60609 400 aa12.37□□□□□ -0.43
COL4A3-205ENST00000471862 CST3P01034 146 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms