RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 GAS2L1Q99501 681 aaPredicted RBP13.5□□□□□ -0.25
SND1-209ENST00000470723 TLE6Q9H808 572 aa13.5□□□□□ -0.25
SND1-209ENST00000470723 GCNT4Q9P109 453 aa13.5□□□□□ -0.25
SND1-209ENST00000470723 HSFX1Q9UBD0 423 aa13.5□□□□□ -0.25
SND1-209ENST00000470723 APEX2Q9UBZ4 518 aa13.5□□□□□ -0.25
SND1-209ENST00000470723 CDH9Q9ULB4 789 aa13.5□□□□□ -0.25
SND1-209ENST00000470723 PCDHGC5Q9Y5F6 944 aa13.5□□□□□ -0.25
SND1-209ENST00000470723 ATG2AQ2TAZ0 1938 aa13.5□□□□□ -0.25
SND1-209ENST00000470723 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.49□□□□□ -0.25
SND1-209ENST00000470723 FSD2A1L4K1 749 aa13.49□□□□□ -0.25
SND1-209ENST00000470723 C2CD2LO14523 706 aa13.49□□□□□ -0.25
SND1-209ENST00000470723 CILPO75339 1184 aa13.49□□□□□ -0.25
SND1-209ENST00000470723 SERPINC1P01008 464 aa13.49□□□□□ -0.25
SND1-209ENST00000470723 ADH1AP07327 375 aa13.49□□□□□ -0.25
SND1-209ENST00000470723 OR1D2P34982 312 aa13.49□□□□□ -0.25
SND1-209ENST00000470723 PBX1P40424 430 aa13.49□□□□□ -0.25
SND1-209ENST00000470723 CLCN4P51793 760 aa13.49□□□□□ -0.25
SND1-209ENST00000470723 UBASH3AP57075 661 aa13.49□□□□□ -0.25
SND1-209ENST00000470723 ADAM15Q13444 863 aa13.49□□□□□ -0.25
SND1-209ENST00000470723 CTC1Q2NKJ3 1217 aa13.49□□□□□ -0.25
SND1-209ENST00000470723 ADGRD2Q7Z7M1 963 aa13.49□□□□□ -0.25
SND1-209ENST00000470723 ARHGEF19Q8IW93 802 aa13.49□□□□□ -0.25
SND1-209ENST00000470723 EFHBQ8N7U6 833 aa13.49□□□□□ -0.25
SND1-209ENST00000470723 OR10T2Q8NGX3 314 aa13.49□□□□□ -0.25
SND1-209ENST00000470723 PPP2R3CQ969Q6 453 aa13.49□□□□□ -0.25
SND1-209ENST00000470723 KREMEN1Q96MU8 473 aa13.49□□□□□ -0.25
SND1-209ENST00000470723 SNX25Q9H3E2 840 aa13.49□□□□□ -0.25
SND1-209ENST00000470723 SMYD3Q9H7B4 428 aa13.49□□□□□ -0.25
SND1-209ENST00000470723 UBE2TQ9NPD8 197 aaPredicted RBP13.49□□□□□ -0.25
SND1-209ENST00000470723 CISHQ9NSE2 258 aa13.49□□□□□ -0.25
SND1-209ENST00000470723 DDX43Q9NXZ2 648 aaKnown RBP13.49□□□□□ -0.25
SND1-209ENST00000470723 CEP72Q9P209 647 aa13.49□□□□□ -0.25
SND1-209ENST00000470723 CDY1Q9Y6F8 540 aa13.49□□□□□ -0.25
SND1-209ENST00000470723 ATF2P15336 505 aa13.48□□□□□ -0.25
SND1-209ENST00000470723 UCHL3P15374 230 aa13.48□□□□□ -0.25
SND1-209ENST00000470723 PTPN1P18031 435 aaKnown RBP13.48□□□□□ -0.25
SND1-209ENST00000470723 RPL17P18621 184 aaKnown RBP13.48□□□□□ -0.25
SND1-209ENST00000470723 RFX1P22670 979 aa13.48□□□□□ -0.25
SND1-209ENST00000470723 KLRC2P26717 231 aa13.48□□□□□ -0.25
SND1-209ENST00000470723 MFAP3P55082 362 aa13.48□□□□□ -0.25
SND1-209ENST00000470723 YWHAEP62258 255 aaKnown RBP13.48□□□□□ -0.25
SND1-209ENST00000470723 HYAL1Q12794 435 aa13.48□□□□□ -0.25
SND1-209ENST00000470723 LRMPQ12912 555 aa13.48□□□□□ -0.25
SND1-209ENST00000470723 SYCP1Q15431 976 aa13.48□□□□□ -0.25
SND1-209ENST00000470723 TCEAL5Q5H9L2 206 aa13.48□□□□□ -0.25
SND1-209ENST00000470723 INTS6LQ5JSJ4 861 aaKnown RBP13.48□□□□□ -0.25
SND1-209ENST00000470723 RRAGAQ7L523 313 aa13.48□□□□□ -0.25
SND1-209ENST00000470723 DCP1BQ8IZD4 617 aaKnown RBP13.48□□□□□ -0.25
SND1-209ENST00000470723 OR6B3Q8NGW1 331 aa13.48□□□□□ -0.25
SND1-209ENST00000470723 MYCBPAPQ8TBZ2 947 aa13.48□□□□□ -0.25
SND1-209ENST00000470723 C2orf15Q8WU43 125 aaKnown RBP13.48□□□□□ -0.25
SND1-209ENST00000470723 MYLIPQ8WY64 445 aa13.48□□□□□ -0.25
SND1-209ENST00000470723 ARID3AQ99856 593 aa13.48□□□□□ -0.25
SND1-209ENST00000470723 EDEM3Q9BZQ6 932 aa13.48□□□□□ -0.25
SND1-209ENST00000470723 PLEKHA4Q9H4M7 779 aa13.48□□□□□ -0.25
SND1-209ENST00000470723 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.48□□□□□ -0.251e-6■■■■■ 176.2
SND1-209ENST00000470723 AFF4Q9UHB7 1163 aaKnown RBP13.48□□□□□ -0.25
SND1-209ENST00000470723 KIAA1257Q9ULG3 409 aa13.48□□□□□ -0.25
SND1-209ENST00000470723 COL4A4P53420 1690 aaPredicted RBP13.47□□□□□ -0.25
SND1-209ENST00000470723 MYBPHLA2RUH7 354 aa13.47□□□□□ -0.25
SND1-209ENST00000470723 A8MXQ7 604 aa13.47□□□□□ -0.25
SND1-209ENST00000470723 PES1O00541 588 aaKnown RBP13.47□□□□□ -0.25
SND1-209ENST00000470723 PER2O15055 1255 aa13.47□□□□□ -0.25
SND1-209ENST00000470723 TGM5O43548 720 aa13.47□□□□□ -0.25
SND1-209ENST00000470723 VNN2O95498 520 aa13.47□□□□□ -0.25
SND1-209ENST00000470723 PDGFRBP09619 1106 aa13.47□□□□□ -0.25
SND1-209ENST00000470723 IGFBP4P22692 258 aa13.47□□□□□ -0.25
SND1-209ENST00000470723 RAP1GAPP47736 663 aa13.47□□□□□ -0.25
SND1-209ENST00000470723 ZNF132P52740 706 aa13.47□□□□□ -0.25
SND1-209ENST00000470723 NDST1P52848 882 aa13.47□□□□□ -0.25
SND1-209ENST00000470723 RAD23BP54727 409 aa13.47□□□□□ -0.25
SND1-209ENST00000470723 ROR1Q01973 937 aa13.47□□□□□ -0.25
SND1-209ENST00000470723 APBA1Q02410 837 aa13.47□□□□□ -0.25
SND1-209ENST00000470723 MAPRE1Q15691 268 aaKnown RBP13.47□□□□□ -0.25
SND1-209ENST00000470723 NFE2Q16621 373 aaPredicted RBP13.47□□□□□ -0.25
SND1-209ENST00000470723 FIGNQ5HY92 759 aa13.47□□□□□ -0.25
SND1-209ENST00000470723 TCEAL8Q8IYN2 117 aa13.47□□□□□ -0.25
SND1-209ENST00000470723 PPM1KQ8N3J5 372 aa13.47□□□□□ -0.25
SND1-209ENST00000470723 SHC3Q92529 594 aa13.47□□□□□ -0.25
SND1-209ENST00000470723 KAT5Q92993 513 aa13.47□□□□□ -0.25
SND1-209ENST00000470723 TNIP3Q96KP6 325 aa13.47□□□□□ -0.25
SND1-209ENST00000470723 TMEM209Q96SK2 561 aa13.47□□□□□ -0.25
SND1-209ENST00000470723 NT5C1AQ9BXI3 368 aa13.47□□□□□ -0.25
SND1-209ENST00000470723 STK33Q9BYT3 514 aa13.47□□□□□ -0.25
SND1-209ENST00000470723 GANQ9H2C0 597 aa13.47□□□□□ -0.25
SND1-209ENST00000470723 CRTAC1Q9NQ79 661 aa13.47□□□□□ -0.25
SND1-209ENST00000470723 IFNKQ9P0W0 207 aa13.47□□□□□ -0.25
SND1-209ENST00000470723 DNAJC12Q9UKB3 198 aa13.47□□□□□ -0.25
SND1-209ENST00000470723 TSC2P49815 1807 aa13.47□□□□□ -0.25
SND1-209ENST00000470723 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.46□□□□□ -0.25
SND1-209ENST00000470723 WDR27A2RRH5 827 aa13.46□□□□□ -0.25
SND1-209ENST00000470723 RNF225M0QZC1 329 aaPredicted RBP13.46□□□□□ -0.25
SND1-209ENST00000470723 FOXN3O00409 490 aaPredicted RBP13.46□□□□□ -0.25
SND1-209ENST00000470723 AP5Z1O43299 807 aa13.46□□□□□ -0.25
SND1-209ENST00000470723 CBFA2T2O43439 604 aa13.46□□□□□ -0.25
SND1-209ENST00000470723 HCRTO43612 131 aa13.46□□□□□ -0.25
SND1-209ENST00000470723 ATP2C2O75185 946 aa13.46□□□□□ -0.25
SND1-209ENST00000470723 PAEPP09466 180 aa13.46□□□□□ -0.25
SND1-209ENST00000470723 NRIP1P48552 1158 aa13.46□□□□□ -0.25
SND1-209ENST00000470723 TSPY1Q01534 308 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms