RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 SLC30A4O14863 429 aa13.24□□□□□ -0.29
COL5A1-207ENST00000469093 KRT18P05783 430 aaKnown RBP13.24□□□□□ -0.29
COL5A1-207ENST00000469093 HAPLN1P10915 354 aaPredicted RBP13.24□□□□□ -0.29
COL5A1-207ENST00000469093 PLCG1P19174 1290 aa13.24□□□□□ -0.29
COL5A1-207ENST00000469093 CDC25CP30307 473 aa13.24□□□□□ -0.29
COL5A1-207ENST00000469093 DDIT3P35638 169 aa13.24□□□□□ -0.29
COL5A1-207ENST00000469093 PLCB2Q00722 1185 aa13.24□□□□□ -0.29
COL5A1-207ENST00000469093 VEPH1Q14D04 833 aa13.24□□□□□ -0.29
COL5A1-207ENST00000469093 RABEP1Q15276 862 aa13.24□□□□□ -0.29
COL5A1-207ENST00000469093 WSCD1Q658N2 575 aa13.24□□□□□ -0.29
COL5A1-207ENST00000469093 ADALQ6DHV7 355 aa13.24□□□□□ -0.29
COL5A1-207ENST00000469093 SLFN12LQ6IEE8 588 aa13.24□□□□□ -0.29
COL5A1-207ENST00000469093 TMEM150AQ86TG1 271 aa13.24□□□□□ -0.29
COL5A1-207ENST00000469093 METTL23Q86XA0 190 aa13.24□□□□□ -0.29
COL5A1-207ENST00000469093 THEM5Q8N1Q8 247 aa13.24□□□□□ -0.29
COL5A1-207ENST00000469093 NETO1Q8TDF5 533 aa13.24□□□□□ -0.29
COL5A1-207ENST00000469093 RAD54LQ92698 747 aa13.24□□□□□ -0.29
COL5A1-207ENST00000469093 FAM83CQ9BQN1 747 aa13.24□□□□□ -0.29
COL5A1-207ENST00000469093 PYM1Q9BRP8 204 aaKnown RBP13.24□□□□□ -0.29
COL5A1-207ENST00000469093 IKZF4Q9H2S9 585 aa13.24□□□□□ -0.29
COL5A1-207ENST00000469093 ST6GALNAC4Q9H4F1 302 aa13.24□□□□□ -0.29
COL5A1-207ENST00000469093 THG1LQ9NWX6 298 aaKnown RBP13.24□□□□□ -0.29
COL5A1-207ENST00000469093 C2CD2Q9Y426 696 aa13.24□□□□□ -0.29
COL5A1-207ENST00000469093 SCN1AP35498 2009 aa13.23□□□□□ -0.29
COL5A1-207ENST00000469093 EXTL3O43909 919 aa13.23□□□□□ -0.29
COL5A1-207ENST00000469093 GDF9O60383 454 aa13.23□□□□□ -0.29
COL5A1-207ENST00000469093 CD2BP2O95400 341 aaKnown RBP13.23□□□□□ -0.29
COL5A1-207ENST00000469093 F11P03951 625 aa13.23□□□□□ -0.29
COL5A1-207ENST00000469093 ABCD1P33897 745 aa13.23□□□□□ -0.29
COL5A1-207ENST00000469093 TAF6P49848 677 aa13.23□□□□□ -0.29
COL5A1-207ENST00000469093 POU5F1Q01860 360 aaKnown RBP13.23□□□□□ -0.29
COL5A1-207ENST00000469093 SMARCB1Q12824 385 aa13.23□□□□□ -0.29
COL5A1-207ENST00000469093 ITPRIPL2Q3MIP1 535 aa13.23□□□□□ -0.29
COL5A1-207ENST00000469093 CRELD2Q6UXH1 353 aaPredicted RBP13.23□□□□□ -0.29
COL5A1-207ENST00000469093 PRR23CQ6ZRP0 262 aa13.23□□□□□ -0.29
COL5A1-207ENST00000469093 ZNF720Q7Z2F6 126 aa13.23□□□□□ -0.29
COL5A1-207ENST00000469093 CMTM8Q8IZV2 173 aa13.23□□□□□ -0.29
COL5A1-207ENST00000469093 FAM160A2Q8N612 972 aaPredicted RBP13.23□□□□□ -0.29
COL5A1-207ENST00000469093 C2orf15Q8WU43 125 aaKnown RBP13.23□□□□□ -0.29
COL5A1-207ENST00000469093 CCSER1Q9C0I3 900 aa13.23□□□□□ -0.29
COL5A1-207ENST00000469093 AGO2Q9UKV8 859 aaKnown RBP13.23□□□□□ -0.29
COL5A1-207ENST00000469093 OTOL1A6NHN0 477 aaPredicted RBP13.22□□□□□ -0.29
COL5A1-207ENST00000469093 KPNA7A9QM74 516 aa13.22□□□□□ -0.29
COL5A1-207ENST00000469093 TBCAO75347 108 aaKnown RBP13.22□□□□□ -0.29
COL5A1-207ENST00000469093 ADRB1P08588 477 aa13.22□□□□□ -0.29
COL5A1-207ENST00000469093 HMGA1P17096 107 aaKnown RBP13.22□□□□□ -0.29
COL5A1-207ENST00000469093 ADSSP30520 456 aa13.22□□□□□ -0.29
COL5A1-207ENST00000469093 LONP1P36776 959 aaKnown RBP13.22□□□□□ -0.29
COL5A1-207ENST00000469093 MCM2P49736 904 aa13.22□□□□□ -0.29
COL5A1-207ENST00000469093 NLRP12P59046 1061 aa13.22□□□□□ -0.29
COL5A1-207ENST00000469093 TAF12Q16514 161 aa13.22□□□□□ -0.29
COL5A1-207ENST00000469093 LARP1BQ659C4 914 aaKnown RBP13.22□□□□□ -0.29
COL5A1-207ENST00000469093 PKN3Q6P5Z2 889 aa13.22□□□□□ -0.29
COL5A1-207ENST00000469093 CEP68Q76N32 757 aa13.22□□□□□ -0.29
COL5A1-207ENST00000469093 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.22□□□□□ -0.29
COL5A1-207ENST00000469093 WDR5BQ86VZ2 330 aa13.22□□□□□ -0.29
COL5A1-207ENST00000469093 SPPL2BQ8TCT7 592 aa13.22□□□□□ -0.29
COL5A1-207ENST00000469093 LARP4BQ92615 738 aaKnown RBP13.22□□□□□ -0.29
COL5A1-207ENST00000469093 USP13Q92995 863 aaPredicted RBP13.22□□□□□ -0.29
COL5A1-207ENST00000469093 CHFRQ96EP1 664 aa13.22□□□□□ -0.29
COL5A1-207ENST00000469093 HPS4Q9NQG7 708 aa13.22□□□□□ -0.29
COL5A1-207ENST00000469093 TMLHEQ9NVH6 421 aa13.22□□□□□ -0.29
COL5A1-207ENST00000469093 ABI2Q9NYB9 513 aaPredicted RBP13.22□□□□□ -0.29
COL5A1-207ENST00000469093 ZMYM5Q9UJ78 669 aa13.22□□□□□ -0.29
COL5A1-207ENST00000469093 CCL26Q9Y258 94 aa13.22□□□□□ -0.29
COL5A1-207ENST00000469093 TRDMT1O14717 391 aaKnown RBP13.21□□□□□ -0.29
COL5A1-207ENST00000469093 RUNX3Q13761 415 aa13.21□□□□□ -0.29
COL5A1-207ENST00000469093 PTPAQ15257 358 aa13.21□□□□□ -0.29
COL5A1-207ENST00000469093 SF3A1Q15459 793 aaKnown RBP13.21□□□□□ -0.29
COL5A1-207ENST00000469093 TMEM196Q5HYL7 178 aa13.21□□□□□ -0.29
COL5A1-207ENST00000469093 PPM1JQ5JR12 505 aa13.21□□□□□ -0.29
COL5A1-207ENST00000469093 FSTL4Q6MZW2 842 aa13.21□□□□□ -0.29
COL5A1-207ENST00000469093 USP49Q70CQ1 688 aa13.21□□□□□ -0.29
COL5A1-207ENST00000469093 EFCAB13Q8IY85 973 aa13.21□□□□□ -0.29
COL5A1-207ENST00000469093 DCP1BQ8IZD4 617 aaKnown RBP13.21□□□□□ -0.29
COL5A1-207ENST00000469093 MAB21L3Q8N8X9 362 aa13.21□□□□□ -0.29
COL5A1-207ENST00000469093 KRI1Q8N9T8 703 aaKnown RBP13.21□□□□□ -0.29
COL5A1-207ENST00000469093 RASSF8Q8NHQ8 419 aa13.21□□□□□ -0.29
COL5A1-207ENST00000469093 GCNAQ96QF7 691 aa13.21□□□□□ -0.29
COL5A1-207ENST00000469093 STRA6Q9BX79 667 aa13.21□□□□□ -0.29
COL5A1-207ENST00000469093 EBF3Q9H4W6 596 aa13.21□□□□□ -0.29
COL5A1-207ENST00000469093 FBRSL1Q9HCM7 1045 aaKnown RBP13.21□□□□□ -0.29
COL5A1-207ENST00000469093 ATG2BQ96BY7 2078 aa13.2□□□□□ -0.3
COL5A1-207ENST00000469093 RALGAPA1Q6GYQ0 2036 aa13.2□□□□□ -0.3
COL5A1-207ENST00000469093 CCDC163A0A0D9SF12 145 aa13.2□□□□□ -0.3
COL5A1-207ENST00000469093 SOBPA7XYQ1 873 aa13.2□□□□□ -0.3
COL5A1-207ENST00000469093 AXIN1O15169 862 aa13.2□□□□□ -0.3
COL5A1-207ENST00000469093 FOXD2O60548 495 aaPredicted RBP13.2□□□□□ -0.3
COL5A1-207ENST00000469093 PPP1R37O75864 691 aa13.2□□□□□ -0.3
COL5A1-207ENST00000469093 KRT37O76014 449 aa13.2□□□□□ -0.3
COL5A1-207ENST00000469093 BMP15O95972 392 aa13.2□□□□□ -0.3
COL5A1-207ENST00000469093 AVPR1AP37288 418 aa13.2□□□□□ -0.3
COL5A1-207ENST00000469093 PXNP49023 591 aaPredicted RBP13.2□□□□□ -0.3
COL5A1-207ENST00000469093 GPR15P49685 360 aa13.2□□□□□ -0.3
COL5A1-207ENST00000469093 WNT7BP56706 349 aa13.2□□□□□ -0.3
COL5A1-207ENST00000469093 KCNA1Q09470 495 aa13.2□□□□□ -0.3
COL5A1-207ENST00000469093 GRSF1Q12849 480 aaKnown RBP eCLIP13.2□□□□□ -0.3
COL5A1-207ENST00000469093 POSTNQ15063 836 aa13.2□□□□□ -0.3
COL5A1-207ENST00000469093 TXNDC8Q6A555 127 aa13.2□□□□□ -0.3
COL5A1-207ENST00000469093 SCARA3Q6AZY7 606 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms